RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 HIGD1BQ9P298 99 aa9.94□□□□□ -0.82
PTPN20-206ENST00000395722 KMT2AQ03164 3969 aa9.93□□□□□ -0.82
PTPN20-206ENST00000395722 F8WDY8 70 aa9.93□□□□□ -0.82
PTPN20-206ENST00000395722 C2orf82Q6UX34 121 aa9.93□□□□□ -0.82
PTPN20-206ENST00000395722 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
PTPN20-206ENST00000395722 LRCOL1A6NCL2 159 aa9.92□□□□□ -0.82
PTPN20-206ENST00000395722 ZNF561-AS1K7EIQ3 104 aa9.92□□□□□ -0.82
PTPN20-206ENST00000395722 CKS1BP61024 79 aa9.92□□□□□ -0.82
PTPN20-206ENST00000395722 C1orf134Q5TEV5 83 aa9.92□□□□□ -0.82
PTPN20-206ENST00000395722 DDTP30046 118 aa9.92□□□□□ -0.82
PTPN20-206ENST00000395722 SCGB1D4Q6XE38 83 aa9.91□□□□□ -0.82
PTPN20-206ENST00000395722 LECT2O14960 151 aa9.9□□□□□ -0.82
PTPN20-206ENST00000395722 TIMM17BO60830 172 aa9.9□□□□□ -0.82
PTPN20-206ENST00000395722 HNRNPA3P51991 378 aaKnown RBP9.9□□□□□ -0.82
PTPN20-206ENST00000395722 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
PTPN20-206ENST00000395722 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.82
PTPN20-206ENST00000395722 LITAFQ99732 161 aa9.9□□□□□ -0.82
PTPN20-206ENST00000395722 SLPIP03973 132 aa9.88□□□□□ -0.83
PTPN20-206ENST00000395722 C14orf177Q52M58 125 aa9.88□□□□□ -0.83
PTPN20-206ENST00000395722 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
PTPN20-206ENST00000395722 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
PTPN20-206ENST00000395722 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
PTPN20-206ENST00000395722 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
PTPN20-206ENST00000395722 Q6ZRU5 148 aa9.87□□□□□ -0.83
PTPN20-206ENST00000395722 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
PTPN20-206ENST00000395722 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
PTPN20-206ENST00000395722 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
PTPN20-206ENST00000395722 ERG28Q9UKR5 140 aa9.86□□□□□ -0.83
PTPN20-206ENST00000395722 A0A087WTM6 91 aa9.86□□□□□ -0.83
PTPN20-206ENST00000395722 LINC00587B1AMM8 73 aa9.86□□□□□ -0.83
PTPN20-206ENST00000395722 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
PTPN20-206ENST00000395722 PCP4L1A6NKN8 68 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 RTL8CO15255 209 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 SMIM13P0DJ93 91 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
PTPN20-206ENST00000395722 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 SACSQ9NZJ4 4579 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
PTPN20-206ENST00000395722 CTAG1AP78358 180 aa9.84□□□□□ -0.83
PTPN20-206ENST00000395722 CIRBPQ14011 172 aaKnown RBP9.84□□□□□ -0.83
PTPN20-206ENST00000395722 COX17Q14061 63 aa9.84□□□□□ -0.83
PTPN20-206ENST00000395722 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
PTPN20-206ENST00000395722 HSD52Q0P140 79 aa9.84□□□□□ -0.83
PTPN20-206ENST00000395722 TAL2Q16559 108 aa9.84□□□□□ -0.83
PTPN20-206ENST00000395722 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
PTPN20-206ENST00000395722 Q6ZVH6 145 aa9.83□□□□□ -0.84
PTPN20-206ENST00000395722 Q8N814 137 aa9.83□□□□□ -0.84
PTPN20-206ENST00000395722 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
PTPN20-206ENST00000395722 A0A0U1RRA0 63 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 PFN2P35080 140 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 LINC00158P58513 81 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTPN20-206ENST00000395722 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 DAND5Q8N907 189 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 PPDPFQ9H3Y8 114 aa9.81□□□□□ -0.84
PTPN20-206ENST00000395722 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
PTPN20-206ENST00000395722 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
PTPN20-206ENST00000395722 IFITM1P13164 125 aa9.79□□□□□ -0.84
PTPN20-206ENST00000395722 TNP2Q05952 138 aa9.79□□□□□ -0.84
PTPN20-206ENST00000395722 CEND1Q8N111 149 aa9.79□□□□□ -0.84
PTPN20-206ENST00000395722 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
PTPN20-206ENST00000395722 HYDINQ4G0P3 5121 aa9.78□□□□□ -0.84
PTPN20-206ENST00000395722 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-206ENST00000395722 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-206ENST00000395722 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
PTPN20-206ENST00000395722 NDUFC2-KCTD14E9PQ53 114 aa9.78□□□□□ -0.84
PTPN20-206ENST00000395722 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-206ENST00000395722 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
PTPN20-206ENST00000395722 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
PTPN20-206ENST00000395722 BVES-AS1Q5T3Y7 98 aa9.77□□□□□ -0.84
PTPN20-206ENST00000395722 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.84
PTPN20-206ENST00000395722 GCSHP23434 173 aa9.76□□□□□ -0.85
PTPN20-206ENST00000395722 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
PTPN20-206ENST00000395722 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
PTPN20-206ENST00000395722 FRAS1Q86XX4 4008 aa9.76□□□□□ -0.85
PTPN20-206ENST00000395722 M0R143 59 aa9.75□□□□□ -0.85
PTPN20-206ENST00000395722 HINT1P49773 126 aaPredicted RBP9.75□□□□□ -0.85
PTPN20-206ENST00000395722 FXYD2P54710 66 aa9.75□□□□□ -0.85
PTPN20-206ENST00000395722 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
PTPN20-206ENST00000395722 Q6ZRP5 223 aa9.75□□□□□ -0.85
PTPN20-206ENST00000395722 EREGO14944 169 aa9.74□□□□□ -0.85
PTPN20-206ENST00000395722 NPC2P61916 151 aa9.74□□□□□ -0.85
PTPN20-206ENST00000395722 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
PTPN20-206ENST00000395722 RPL24P83731 157 aaKnown RBP9.73□□□□□ -0.85
PTPN20-206ENST00000395722 SNHG12Q9BXW3 62 aa9.73□□□□□ -0.85
PTPN20-206ENST00000395722 RYR2Q92736 4967 aa9.72□□□□□ -0.85
PTPN20-206ENST00000395722 A4D1N5 150 aa9.72□□□□□ -0.85
PTPN20-206ENST00000395722 KMT2CQ8NEZ4 4911 aaKnown RBP9.71□□□□□ -0.85
PTPN20-206ENST00000395722 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
PTPN20-206ENST00000395722 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
PTPN20-206ENST00000395722 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
PTPN20-206ENST00000395722 GAGE2EQ4V326 116 aa9.7□□□□□ -0.86
PTPN20-206ENST00000395722 SDIM1Q6ZPB5 146 aa9.7□□□□□ -0.86
PTPN20-206ENST00000395722 GAGE2DQ9UEU5 116 aa9.7□□□□□ -0.86
PTPN20-206ENST00000395722 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
PTPN20-206ENST00000395722 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms