RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PRO0255Q9UI72 69 aa10.53□□□□□ -0.72
CPSF7-202ENST00000394888 LYRM9A8MSI8 78 aa10.52□□□□□ -0.73
CPSF7-202ENST00000394888 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
CPSF7-202ENST00000394888 RPL28P46779 137 aaKnown RBP10.51□□□□□ -0.73
CPSF7-202ENST00000394888 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
CPSF7-202ENST00000394888 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
CPSF7-202ENST00000394888 C2orf82Q6UX34 121 aa10.5□□□□□ -0.73
CPSF7-202ENST00000394888 C9orf129Q5T035 196 aaKnown RBP10.49□□□□□ -0.73
CPSF7-202ENST00000394888 IBA57-AS1B1ANH7 110 aa10.49□□□□□ -0.73
CPSF7-202ENST00000394888 CLPSL2Q6UWE3 100 aa10.49□□□□□ -0.73
CPSF7-202ENST00000394888 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
CPSF7-202ENST00000394888 SDIM1Q6ZPB5 146 aa10.48□□□□□ -0.73
CPSF7-202ENST00000394888 XCL1P47992 114 aa10.47□□□□□ -0.73
CPSF7-202ENST00000394888 SMIM11BQ8TCY0 68 aa10.47□□□□□ -0.73
CPSF7-202ENST00000394888 Q8IZM0 81 aa10.47□□□□□ -0.73
CPSF7-202ENST00000394888 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
CPSF7-202ENST00000394888 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
CPSF7-202ENST00000394888 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
CPSF7-202ENST00000394888 A0A087WYN8 130 aa10.46□□□□□ -0.73
CPSF7-202ENST00000394888 PAX4O43316 350 aa10.46□□□□□ -0.74
CPSF7-202ENST00000394888 LINC00269Q8N2A0 174 aa10.46□□□□□ -0.74
CPSF7-202ENST00000394888 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 TRACP01848 142 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 COX6CP09669 75 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 KRTAP10-11P60412 298 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
CPSF7-202ENST00000394888 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
CPSF7-202ENST00000394888 DNAH9Q9NYC9 4486 aa10.44□□□□□ -0.74
CPSF7-202ENST00000394888 SS18Q15532 418 aa10.44□□□□□ -0.74
CPSF7-202ENST00000394888 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
CPSF7-202ENST00000394888 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 FAM240AA0A1B0GVK7 77 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 PFN2P35080 140 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 DNAH10Q8IVF4 4471 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 COPS9Q8WXC6 57 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 OBSCN-AS1Q96MR7 158 aa10.42□□□□□ -0.74
CPSF7-202ENST00000394888 MIFP14174 115 aa10.41□□□□□ -0.74
CPSF7-202ENST00000394888 MAST4O15021 2626 aa10.41□□□□□ -0.74
CPSF7-202ENST00000394888 TRAV13-2A0A0B4J235 113 aa10.41□□□□□ -0.74
CPSF7-202ENST00000394888 LINC00158P58513 81 aa10.41□□□□□ -0.74
CPSF7-202ENST00000394888 PRR3P79522 188 aaKnown RBP10.41□□□□□ -0.74
CPSF7-202ENST00000394888 CHCHD10Q8WYQ3 142 aaPredicted RBP10.41□□□□□ -0.74
CPSF7-202ENST00000394888 TMEM262E9PQX1 116 aa10.4□□□□□ -0.74
CPSF7-202ENST00000394888 Q9HAA7 133 aa10.4□□□□□ -0.74
CPSF7-202ENST00000394888 APOC4P55056 127 aa10.4□□□□□ -0.74
CPSF7-202ENST00000394888 C9orf116Q5BN46 136 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-202ENST00000394888 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
CPSF7-202ENST00000394888 REG3AQ06141 175 aa10.39□□□□□ -0.75
CPSF7-202ENST00000394888 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
CPSF7-202ENST00000394888 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
CPSF7-202ENST00000394888 KRTAP26-1Q6PEX3 210 aa10.39□□□□□ -0.75
CPSF7-202ENST00000394888 BAHCC1Q9P281 2608 aa10.39□□□□□ -0.75
CPSF7-202ENST00000394888 COL7A1Q02388 2944 aa10.39□□□□□ -0.75
CPSF7-202ENST00000394888 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
CPSF7-202ENST00000394888 C6orf223Q8N319 242 aa10.38□□□□□ -0.75
CPSF7-202ENST00000394888 CRPP02741 224 aa10.37□□□□□ -0.75
CPSF7-202ENST00000394888 DAD1P61803 113 aa10.37□□□□□ -0.75
CPSF7-202ENST00000394888 LINC00167Q96N53 147 aa10.37□□□□□ -0.75
CPSF7-202ENST00000394888 ATP5G1P05496 136 aa10.36□□□□□ -0.75
CPSF7-202ENST00000394888 RETNQ9HD89 108 aa10.36□□□□□ -0.75
CPSF7-202ENST00000394888 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
CPSF7-202ENST00000394888 C6orf226Q5I0X4 101 aa10.36□□□□□ -0.75
CPSF7-202ENST00000394888 CKS1BP61024 79 aa10.35□□□□□ -0.75
CPSF7-202ENST00000394888 LELP1Q5T871 98 aa10.35□□□□□ -0.75
CPSF7-202ENST00000394888 C15orf53Q8NAA6 179 aa10.35□□□□□ -0.75
CPSF7-202ENST00000394888 ANGP03950 147 aaKnown RBP10.34□□□□□ -0.75
CPSF7-202ENST00000394888 TTC32Q5I0X7 151 aa10.34□□□□□ -0.75
CPSF7-202ENST00000394888 Q6Q795 121 aa10.34□□□□□ -0.75
CPSF7-202ENST00000394888 LYPD5Q6UWN5 251 aa10.34□□□□□ -0.75
CPSF7-202ENST00000394888 OXLD1Q5BKU9 147 aa10.34□□□□□ -0.75
CPSF7-202ENST00000394888 EGFEM1PQ0D2K5 195 aa10.33□□□□□ -0.76
CPSF7-202ENST00000394888 KLK5Q9Y337 293 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-202ENST00000394888 MALP21145 153 aa10.32□□□□□ -0.76
CPSF7-202ENST00000394888 COX17Q14061 63 aa10.32□□□□□ -0.76
CPSF7-202ENST00000394888 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
CPSF7-202ENST00000394888 SPART-AS1P0CW21 52 aa10.32□□□□□ -0.76
CPSF7-202ENST00000394888 LINC00526Q96FQ7 95 aa10.32□□□□□ -0.76
CPSF7-202ENST00000394888 NDUFC2O95298 119 aa10.32□□□□□ -0.76
CPSF7-202ENST00000394888 TRBV7-7A0A0K0K1E9 115 aa10.31□□□□□ -0.76
CPSF7-202ENST00000394888 UNQ6190/PRO20217Q6UXQ8 127 aa10.31□□□□□ -0.76
CPSF7-202ENST00000394888 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
CPSF7-202ENST00000394888 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
CPSF7-202ENST00000394888 KRTAP24-1Q3LI83 254 aa10.3□□□□□ -0.76
CPSF7-202ENST00000394888 SLPIP03973 132 aa10.29□□□□□ -0.76
CPSF7-202ENST00000394888 WFDC10BQ8IUB3 73 aa10.28□□□□□ -0.76
CPSF7-202ENST00000394888 LECT2O14960 151 aa10.27□□□□□ -0.76
CPSF7-202ENST00000394888 NDUFV3P56181 108 aaKnown RBP10.27□□□□□ -0.76
CPSF7-202ENST00000394888 CXCL5P42830 114 aa10.27□□□□□ -0.77
CPSF7-202ENST00000394888 A0A1B0GV72 72 aa10.26□□□□□ -0.77
CPSF7-202ENST00000394888 CYSRT1A8MQ03 144 aa10.26□□□□□ -0.77
CPSF7-202ENST00000394888 H0YGX0 51 aa10.26□□□□□ -0.77
CPSF7-202ENST00000394888 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
CPSF7-202ENST00000394888 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
CPSF7-202ENST00000394888 HTN3P15516 51 aa10.26□□□□□ -0.77
CPSF7-202ENST00000394888 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
CPSF7-202ENST00000394888 Q6ZTC4 211 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms