RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CRYBG3Q68DQ2 2970 aa13.25□□□□□ -0.29
HOXC6-202ENST00000394331 SLPIP03973 132 aa13.24□□□□□ -0.29
HOXC6-202ENST00000394331 LINC00482Q8N8I6 264 aa13.24□□□□□ -0.29
HOXC6-202ENST00000394331 FBN2P35556 2912 aa13.24□□□□□ -0.29
HOXC6-202ENST00000394331 ZNF462Q96JM2 2506 aa13.23□□□□□ -0.29
HOXC6-202ENST00000394331 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
HOXC6-202ENST00000394331 PKIGQ9Y2B9 76 aa13.23□□□□□ -0.29
HOXC6-202ENST00000394331 PTPN13Q12923 2485 aa13.22□□□□□ -0.29
HOXC6-202ENST00000394331 KRTAP1-3Q8IUG1 177 aa13.22□□□□□ -0.29
HOXC6-202ENST00000394331 NAV2Q8IVL1 2488 aa13.22□□□□□ -0.29
HOXC6-202ENST00000394331 LINC00158P58513 81 aa13.21□□□□□ -0.29
HOXC6-202ENST00000394331 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
HOXC6-202ENST00000394331 K7EQD1 137 aa13.2□□□□□ -0.3
HOXC6-202ENST00000394331 V9GYY9 64 aa13.2□□□□□ -0.3
HOXC6-202ENST00000394331 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
HOXC6-202ENST00000394331 LRRK2Q5S007 2527 aa13.2□□□□□ -0.3
HOXC6-202ENST00000394331 STHQ8IWL8 128 aa13.19□□□□□ -0.3
HOXC6-202ENST00000394331 TRBV7-6A0A0J9YX20 115 aa13.19□□□□□ -0.3
HOXC6-202ENST00000394331 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
HOXC6-202ENST00000394331 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
HOXC6-202ENST00000394331 Q8N814 137 aa13.19□□□□□ -0.3
HOXC6-202ENST00000394331 F8WEM9 126 aa13.18□□□□□ -0.3
HOXC6-202ENST00000394331 SEC61GP60059 68 aa13.18□□□□□ -0.3
HOXC6-202ENST00000394331 WFDC11Q8NEX6 87 aa13.18□□□□□ -0.3
HOXC6-202ENST00000394331 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
HOXC6-202ENST00000394331 C1orf195Q5TG92 126 aa13.17□□□□□ -0.3
HOXC6-202ENST00000394331 A0A1W2PRX2 142 aa13.17□□□□□ -0.3
HOXC6-202ENST00000394331 DNAJC9-AS1A6NH13 148 aa13.17□□□□□ -0.3
HOXC6-202ENST00000394331 NTM-AS1Q6ZSK4 140 aa13.17□□□□□ -0.3
HOXC6-202ENST00000394331 LOC110117498A0A087WWA1 95 aa13.16□□□□□ -0.3
HOXC6-202ENST00000394331 PAX4O43316 350 aa13.16□□□□□ -0.3
HOXC6-202ENST00000394331 CCL24O00175 119 aa13.16□□□□□ -0.3
HOXC6-202ENST00000394331 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.3
HOXC6-202ENST00000394331 C1orf158Q8N1D5 194 aa13.15□□□□□ -0.3
HOXC6-202ENST00000394331 RMI2Q96E14 147 aa13.15□□□□□ -0.3
HOXC6-202ENST00000394331 CXCL6P80162 114 aa13.15□□□□□ -0.3
HOXC6-202ENST00000394331 USP24Q9UPU5 2620 aa13.15□□□□□ -0.31
HOXC6-202ENST00000394331 MXRA5Q9NR99 2828 aa13.15□□□□□ -0.31
HOXC6-202ENST00000394331 LINC01547P58512 204 aaPredicted RBP13.13□□□□□ -0.31
HOXC6-202ENST00000394331 RBM3P98179 157 aaKnown RBP13.13□□□□□ -0.31
HOXC6-202ENST00000394331 Q6ZQT0 140 aa13.13□□□□□ -0.31
HOXC6-202ENST00000394331 IL17DQ8TAD2 202 aa13.13□□□□□ -0.31
HOXC6-202ENST00000394331 UBR5O95071 2799 aaPredicted RBP13.13□□□□□ -0.31
HOXC6-202ENST00000394331 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
HOXC6-202ENST00000394331 C11orf44Q8N8P7 122 aa13.12□□□□□ -0.31
HOXC6-202ENST00000394331 SNURFQ9Y675 71 aa13.12□□□□□ -0.31
HOXC6-202ENST00000394331 CMC4P56277 68 aaPredicted RBP13.11□□□□□ -0.31
HOXC6-202ENST00000394331 BRK1Q8WUW1 75 aa13.11□□□□□ -0.31
HOXC6-202ENST00000394331 TRBV7-4A0A0J9YYF1 115 aa13.11□□□□□ -0.31
HOXC6-202ENST00000394331 MYO9AB2RTY4 2548 aa13.11□□□□□ -0.31
HOXC6-202ENST00000394331 TRAV10A0A0B4J240 114 aa13.1□□□□□ -0.31
HOXC6-202ENST00000394331 TOMM7Q9P0U1 55 aa13.1□□□□□ -0.31
HOXC6-202ENST00000394331 LINC00474Q9P2X8 69 aa13.1□□□□□ -0.31
HOXC6-202ENST00000394331 ERC2-IT1O76042 136 aa13.1□□□□□ -0.31
HOXC6-202ENST00000394331 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
HOXC6-202ENST00000394331 UBE2L6O14933 153 aa13.09□□□□□ -0.31
HOXC6-202ENST00000394331 ESM1Q9NQ30 184 aa13.09□□□□□ -0.31
HOXC6-202ENST00000394331 TEX15Q9BXT5 2789 aa13.09□□□□□ -0.31
HOXC6-202ENST00000394331 NANOS2P60321 138 aaKnown RBP13.09□□□□□ -0.31
HOXC6-202ENST00000394331 CENPEQ02224 2701 aa13.08□□□□□ -0.31
HOXC6-202ENST00000394331 IGHV3OR16-9A0A0B4J2B5 98 aa13.08□□□□□ -0.32
HOXC6-202ENST00000394331 A0A087WZ39 114 aa13.08□□□□□ -0.32
HOXC6-202ENST00000394331 MIFP14174 115 aa13.07□□□□□ -0.32
HOXC6-202ENST00000394331 Q6ZTI0 123 aa13.07□□□□□ -0.32
HOXC6-202ENST00000394331 Q6ZVQ6 151 aa13.06□□□□□ -0.32
HOXC6-202ENST00000394331 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
HOXC6-202ENST00000394331 ZNF561-AS1K7EIQ3 104 aa13.06□□□□□ -0.32
HOXC6-202ENST00000394331 PDE6GP18545 87 aa13.06□□□□□ -0.32
HOXC6-202ENST00000394331 C9orf66Q5T8R8 295 aa13.04□□□□□ -0.32
HOXC6-202ENST00000394331 LINC01006Q8NI28 216 aa13.03□□□□□ -0.32
HOXC6-202ENST00000394331 H3BQ85 93 aa13.02□□□□□ -0.32
HOXC6-202ENST00000394331 NOP10Q9NPE3 64 aaKnown RBP13.02□□□□□ -0.33
HOXC6-202ENST00000394331 RNASE1P07998 156 aaKnown RBP13.02□□□□□ -0.33
HOXC6-202ENST00000394331 Q8N3U1 123 aa13.01□□□□□ -0.33
HOXC6-202ENST00000394331 C16orf74Q96GX8 76 aa13.01□□□□□ -0.33
HOXC6-202ENST00000394331 HAMPP81172 84 aa13.01□□□□□ -0.33
HOXC6-202ENST00000394331 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
HOXC6-202ENST00000394331 TLN2Q9Y4G6 2542 aa13□□□□□ -0.33
HOXC6-202ENST00000394331 A0A0U1RQV1 116 aa12.99□□□□□ -0.33
HOXC6-202ENST00000394331 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
HOXC6-202ENST00000394331 LINC00575Q6W349 94 aa12.99□□□□□ -0.33
HOXC6-202ENST00000394331 IGLV1-51P01701 117 aa12.99□□□□□ -0.33
HOXC6-202ENST00000394331 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
HOXC6-202ENST00000394331 TMEM254Q8TBM7 123 aa12.99□□□□□ -0.33
HOXC6-202ENST00000394331 SONP18583 2426 aaKnown RBP12.97□□□□□ -0.33
HOXC6-202ENST00000394331 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
HOXC6-202ENST00000394331 NREPQ16612 68 aa12.97□□□□□ -0.33
HOXC6-202ENST00000394331 KRTAP1-1Q07627 177 aa12.97□□□□□ -0.33
HOXC6-202ENST00000394331 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
HOXC6-202ENST00000394331 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.33
HOXC6-202ENST00000394331 Q8IZM0 81 aa12.96□□□□□ -0.33
HOXC6-202ENST00000394331 C19orf73Q9NVV2 129 aa12.95□□□□□ -0.34
HOXC6-202ENST00000394331 APCP25054 2843 aa12.95□□□□□ -0.34
HOXC6-202ENST00000394331 ESRGQ1W209 222 aa12.95□□□□□ -0.34
HOXC6-202ENST00000394331 C6orf226Q5I0X4 101 aa12.95□□□□□ -0.34
HOXC6-202ENST00000394331 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
HOXC6-202ENST00000394331 EPG5Q9HCE0 2579 aa12.95□□□□□ -0.34
HOXC6-202ENST00000394331 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
HOXC6-202ENST00000394331 FAM229BQ4G0N7 80 aa12.94□□□□□ -0.34
HOXC6-202ENST00000394331 WFDC10AQ9H1F0 79 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms