RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PYGO1Q9Y3Y4 419 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 IGLV4-69A0A075B6H9 119 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 A0A0J9YXV3 536 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 PLNP26678 52 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 DEFB121Q5J5C9 76 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 TMEM170BQ5T4T1 132 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 DAZ4Q86SG3 579 aaKnown RBP4.08□□□□□ -1.76
CASC3-202ENST00000394114 Q8N3U1 123 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 DAZ3Q9NR90 486 aaKnown RBP4.08□□□□□ -1.76
CASC3-202ENST00000394114 UBE2D4Q9Y2X8 147 aa4.08□□□□□ -1.76
CASC3-202ENST00000394114 IGHV3-64A0A075B6Q5 118 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 SPART-AS1P0CW21 52 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 COX8AP10176 69 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 MRPL55Q7Z7F7 128 aaKnown RBP4.07□□□□□ -1.76
CASC3-202ENST00000394114 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 CHAC1Q9BUX1 264 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 TENM2Q9NT68 2774 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 CSMD3Q7Z407 3707 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 H3BRM9 83 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 PAX4O43316 350 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 SBSPONQ8IVN8 264 aa4.07□□□□□ -1.76
CASC3-202ENST00000394114 LINC01549A6NIU2 74 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 APOMO95445 188 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 XP32Q5T750 250 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 VSIG2Q96IQ7 327 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 PRO0255Q9UI72 69 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 PRKDCP78527 4128 aaKnown RBP4.06□□□□□ -1.76
CASC3-202ENST00000394114 IGKV3OR2-268A0A0C4DH90 116 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 E9PLD3 99 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 K7EIL1 84 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 UBE2L6O14933 153 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 SNCGO76070 127 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 ATP5G1P05496 136 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 C2orf91Q6ZV80 131 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 CHCHD5Q9BSY4 110 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
CASC3-202ENST00000394114 TRBV25-1A0A075B6N4 114 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 A0A0J9YWU9 116 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 F8W1H4 67 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 ATP6V0E2Q8NHE4 81 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 TRBV6-8A0A0A6YYG3 113 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 TRAV13-1A0A0B4J241 112 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 FAM240AA0A1B0GVK7 77 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 C12orf74Q32Q52 190 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 DPH3Q96FX2 82 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 AMELXQ99217 191 aa4.05□□□□□ -1.76
CASC3-202ENST00000394114 Q6ZTC4 211 aa4.04□□□□□ -1.76
CASC3-202ENST00000394114 HUWE1Q7Z6Z7 4374 aaKnown RBP4.04□□□□□ -1.76
CASC3-202ENST00000394114 TMEM262E9PQX1 116 aa4.04□□□□□ -1.76
CASC3-202ENST00000394114 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
CASC3-202ENST00000394114 TSPEAR-AS2P59090 65 aa4.04□□□□□ -1.76
CASC3-202ENST00000394114 NANOS2P60321 138 aaKnown RBP4.04□□□□□ -1.76
CASC3-202ENST00000394114 SEC11AP67812 179 aa4.04□□□□□ -1.76
CASC3-202ENST00000394114 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
CASC3-202ENST00000394114 IGLV4-60A0A075B6I1 120 aa4.03□□□□□ -1.76
CASC3-202ENST00000394114 TRAV8-3A0A0A6YYJ7 113 aa4.03□□□□□ -1.76
CASC3-202ENST00000394114 CLPSL2Q6UWE3 100 aa4.03□□□□□ -1.76
CASC3-202ENST00000394114 Q6ZRP5 223 aa4.03□□□□□ -1.76
CASC3-202ENST00000394114 COX6A2Q02221 97 aa4.03□□□□□ -1.76
CASC3-202ENST00000394114 CDC42SE2Q9NRR3 84 aa4.03□□□□□ -1.76
CASC3-202ENST00000394114 ZNF815PA8K554 130 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 UBE2D1P51668 147 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 HERVK_113P61574 105 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 C3orf22Q8N5N4 141 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 TMEM223A0PJW6 202 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 NDUFC2O95298 119 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
CASC3-202ENST00000394114 PLEKHB2Q96CS7 222 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 TIMM21Q9BVV7 248 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 H3BMG7 143 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 INAFM2P0DMQ5 153 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 SCGB1D4Q6XE38 83 aa4.02□□□□□ -1.77
CASC3-202ENST00000394114 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
CASC3-202ENST00000394114 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
CASC3-202ENST00000394114 ANKRD29Q8N6D5 301 aa4.01□□□□□ -1.77
CASC3-202ENST00000394114 ICOSQ9Y6W8 199 aa4.01□□□□□ -1.77
CASC3-202ENST00000394114 IGHV3-30-3P0DP02 117 aa4.01□□□□□ -1.77
CASC3-202ENST00000394114 LGALS3P17931 250 aaKnown RBP4.01□□□□□ -1.77
CASC3-202ENST00000394114 KPRPQ5T749 579 aaPredicted RBP4.01□□□□□ -1.77
CASC3-202ENST00000394114 LYSTQ99698 3801 aa4.01□□□□□ -1.77
CASC3-202ENST00000394114 KRTAP17-1Q9BYP8 105 aa4.01□□□□□ -1.77
CASC3-202ENST00000394114 C11orf68Q9H3H3 251 aaKnown RBP4.01□□□□□ -1.77
CASC3-202ENST00000394114 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
CASC3-202ENST00000394114 CHCHD10Q8WYQ3 142 aaPredicted RBP4□□□□□ -1.77
CASC3-202ENST00000394114 DEFB131BA0A096LNP1 70 aa4□□□□□ -1.77
CASC3-202ENST00000394114 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
CASC3-202ENST00000394114 Q6Q795 121 aa4□□□□□ -1.77
CASC3-202ENST00000394114 HIST1H4GQ99525 98 aa4□□□□□ -1.77
CASC3-202ENST00000394114 TM2D3Q9BRN9 247 aa4□□□□□ -1.77
CASC3-202ENST00000394114 SPANXCQ9NY87 97 aa4□□□□□ -1.77
CASC3-202ENST00000394114 IGLV10-54A0A075B6I4 117 aa3.99□□□□□ -1.77
CASC3-202ENST00000394114 H7C423 109 aa3.99□□□□□ -1.77
CASC3-202ENST00000394114 LEPROTO15243 131 aa3.99□□□□□ -1.77
CASC3-202ENST00000394114 FXYD2P54710 66 aa3.99□□□□□ -1.77
CASC3-202ENST00000394114 LINC00269Q8N2A0 174 aa3.99□□□□□ -1.77
CASC3-202ENST00000394114 IGHV1-58A0A0C4DH39 117 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms