RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NTN5Q8WTR8 489 aaPredicted RBP15.95■□□□□ 0.14
LRFN4-202ENST00000393952 CKS1BP61024 79 aa15.94■□□□□ 0.14
LRFN4-202ENST00000393952 DLEU1O43261 78 aa15.93■□□□□ 0.14
LRFN4-202ENST00000393952 CXCL5P42830 114 aa15.92■□□□□ 0.14
LRFN4-202ENST00000393952 UQCR10Q9UDW1 63 aa15.92■□□□□ 0.14
LRFN4-202ENST00000393952 C10orf25Q5T742 122 aa15.91■□□□□ 0.14
LRFN4-202ENST00000393952 UNQ6190/PRO20217Q6UXQ8 127 aa15.91■□□□□ 0.14
LRFN4-202ENST00000393952 DNAH17Q9UFH2 4485 aa15.9■□□□□ 0.14
LRFN4-202ENST00000393952 TSTD3H0UI37 97 aa15.9■□□□□ 0.14
LRFN4-202ENST00000393952 C2orf48Q96LS8 159 aa15.9■□□□□ 0.14
LRFN4-202ENST00000393952 CAMK2N2Q96S95 79 aa15.9■□□□□ 0.14
LRFN4-202ENST00000393952 A0A0J9YXY3 114 aa15.89■□□□□ 0.13
LRFN4-202ENST00000393952 RTL8CO15255 209 aa15.89■□□□□ 0.13
LRFN4-202ENST00000393952 MIEN1Q9BRT3 115 aa15.88■□□□□ 0.13
LRFN4-202ENST00000393952 HERV-K104P63124 156 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 C14orf177Q52M58 125 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 SFTA2Q6UW10 78 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 SCGB1D4Q6XE38 83 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 A0A087WTM6 91 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 SLPIP03973 132 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 Q6ZRU5 148 aa15.87■□□□□ 0.13
LRFN4-202ENST00000393952 RYR2Q92736 4967 aa15.86■□□□□ 0.13
LRFN4-202ENST00000393952 KMT2CQ8NEZ4 4911 aaKnown RBP15.86■□□□□ 0.13
LRFN4-202ENST00000393952 FRAS1Q86XX4 4008 aa15.86■□□□□ 0.13
LRFN4-202ENST00000393952 SYCNQ0VAF6 134 aa15.85■□□□□ 0.13
LRFN4-202ENST00000393952 C2orf91Q6ZV80 131 aa15.85■□□□□ 0.13
LRFN4-202ENST00000393952 F8WDY8 70 aa15.84■□□□□ 0.13
LRFN4-202ENST00000393952 C6orf48Q9UBA6 75 aa15.84■□□□□ 0.13
LRFN4-202ENST00000393952 C9orf116Q5BN46 136 aaPredicted RBP15.83■□□□□ 0.13
LRFN4-202ENST00000393952 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.83■□□□□ 0.12
LRFN4-202ENST00000393952 TNP2Q05952 138 aa15.83■□□□□ 0.12
LRFN4-202ENST00000393952 MEIG1Q5JSS6 88 aa15.83■□□□□ 0.12
LRFN4-202ENST00000393952 Q8N814 137 aa15.82■□□□□ 0.12
LRFN4-202ENST00000393952 ERG28Q9UKR5 140 aa15.82■□□□□ 0.12
LRFN4-202ENST00000393952 A0A0U1RRA0 63 aa15.81■□□□□ 0.12
LRFN4-202ENST00000393952 CARD19Q96LW7 228 aa15.81■□□□□ 0.12
LRFN4-202ENST00000393952 SMIM13P0DJ93 91 aa15.8■□□□□ 0.12
LRFN4-202ENST00000393952 HNRNPA3P51991 378 aaKnown RBP15.8■□□□□ 0.12
LRFN4-202ENST00000393952 TRBV30A0A0K0K1B3 111 aa15.79■□□□□ 0.12
LRFN4-202ENST00000393952 LITAFQ99732 161 aa15.79■□□□□ 0.12
LRFN4-202ENST00000393952 HIGD1BQ9P298 99 aa15.79■□□□□ 0.12
LRFN4-202ENST00000393952 PFN2P35080 140 aa15.79■□□□□ 0.12
LRFN4-202ENST00000393952 CNBPP62633 177 aaKnown RBP15.78■□□□□ 0.12
LRFN4-202ENST00000393952 ADAMTSL4-AS1Q5T5F5 129 aa15.78■□□□□ 0.12
LRFN4-202ENST00000393952 TIMM17BO60830 172 aa15.77■□□□□ 0.11
LRFN4-202ENST00000393952 LINC00158P58513 81 aa15.77■□□□□ 0.11
LRFN4-202ENST00000393952 DDTP30046 118 aa15.76■□□□□ 0.11
LRFN4-202ENST00000393952 CIRBPQ14011 172 aaKnown RBP15.76■□□□□ 0.11
LRFN4-202ENST00000393952 DAND5Q8N907 189 aa15.76■□□□□ 0.11
LRFN4-202ENST00000393952 TMEM238C9JI98 176 aa15.75■□□□□ 0.11
LRFN4-202ENST00000393952 PCP4L1A6NKN8 68 aa15.75■□□□□ 0.11
LRFN4-202ENST00000393952 LINC00587B1AMM8 73 aa15.75■□□□□ 0.11
LRFN4-202ENST00000393952 RNF151Q2KHN1 245 aa15.75■□□□□ 0.11
LRFN4-202ENST00000393952 FAT2Q9NYQ8 4349 aa15.73■□□□□ 0.11
LRFN4-202ENST00000393952 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.73■□□□□ 0.11
LRFN4-202ENST00000393952 EREGO14944 169 aa15.73■□□□□ 0.11
LRFN4-202ENST00000393952 COX17Q14061 63 aa15.73■□□□□ 0.11
LRFN4-202ENST00000393952 SPANXB1Q9NS25 103 aaPredicted RBP15.73■□□□□ 0.11
LRFN4-202ENST00000393952 MIR7-3HGQ8N6C7 128 aa15.72■□□□□ 0.11
LRFN4-202ENST00000393952 SPANXDQ9BXN6 97 aa15.71■□□□□ 0.11
LRFN4-202ENST00000393952 SPANXCQ9NY87 97 aa15.71■□□□□ 0.11
LRFN4-202ENST00000393952 FUSP35637 526 aaKnown RBP eCLIP15.7■□□□□ 0.1
LRFN4-202ENST00000393952 CTAG1AP78358 180 aa15.7■□□□□ 0.1
LRFN4-202ENST00000393952 SRSF9Q13242 221 aaKnown RBP eCLIP15.7■□□□□ 0.1
LRFN4-202ENST00000393952 HIST1H4GQ99525 98 aa15.7■□□□□ 0.1
LRFN4-202ENST00000393952 DNAH11Q96DT5 4516 aa15.69■□□□□ 0.1
LRFN4-202ENST00000393952 NDUFC2-KCTD14E9PQ53 114 aa15.68■□□□□ 0.1
LRFN4-202ENST00000393952 NPC2P61916 151 aa15.68■□□□□ 0.1
LRFN4-202ENST00000393952 HSD52Q0P140 79 aa15.66■□□□□ 0.1
LRFN4-202ENST00000393952 C9orf163Q8N9P6 203 aa15.66■□□□□ 0.1
LRFN4-202ENST00000393952 HECTD4Q9Y4D8 3996 aa15.66■□□□□ 0.1
LRFN4-202ENST00000393952 EIF4EBP3O60516 100 aaPredicted RBP15.66■□□□□ 0.1
LRFN4-202ENST00000393952 TLX1NBP0CAT3 122 aa15.66■□□□□ 0.1
LRFN4-202ENST00000393952 LINC01620Q4KN68 170 aa15.66■□□□□ 0.1
LRFN4-202ENST00000393952 Q6ZRP5 223 aa15.66■□□□□ 0.1
LRFN4-202ENST00000393952 RPL18AQ02543 176 aaKnown RBP15.65■□□□□ 0.1
LRFN4-202ENST00000393952 TAL2Q16559 108 aa15.65■□□□□ 0.1
LRFN4-202ENST00000393952 SOSTDC1Q6X4U4 206 aa15.65■□□□□ 0.1
LRFN4-202ENST00000393952 LINC00336Q6ZUF6 198 aa15.65■□□□□ 0.1
LRFN4-202ENST00000393952 Q6ZVH6 145 aa15.65■□□□□ 0.1
LRFN4-202ENST00000393952 LINC00308Q8TCZ7 52 aa15.65■□□□□ 0.1
LRFN4-202ENST00000393952 SND1-IT1Q9HBX3 110 aa15.65■□□□□ 0.1
LRFN4-202ENST00000393952 LOC107984640A0A0U1RRK4 108 aa15.64■□□□□ 0.09
LRFN4-202ENST00000393952 MUSTN1Q8IVN3 82 aa15.64■□□□□ 0.09
LRFN4-202ENST00000393952 GAGE2EQ4V326 116 aa15.63■□□□□ 0.09
LRFN4-202ENST00000393952 GAGE2DQ9UEU5 116 aa15.63■□□□□ 0.09
LRFN4-202ENST00000393952 IGLV5-52A0A0A0MRZ9 124 aa15.62■□□□□ 0.09
LRFN4-202ENST00000393952 KRTAP10-2P60368 255 aa15.62■□□□□ 0.09
LRFN4-202ENST00000393952 IFITM1P13164 125 aa15.62■□□□□ 0.09
LRFN4-202ENST00000393952 GCSHP23434 173 aa15.62■□□□□ 0.09
LRFN4-202ENST00000393952 XAGE1AQ9HD64 81 aa15.62■□□□□ 0.09
LRFN4-202ENST00000393952 CEND1Q8N111 149 aa15.61■□□□□ 0.09
LRFN4-202ENST00000393952 PTTG1IPP53801 180 aa15.6■□□□□ 0.09
LRFN4-202ENST00000393952 GAGE2BQ13066 116 aa15.6■□□□□ 0.09
LRFN4-202ENST00000393952 PKD1P98161 4303 aa15.6■□□□□ 0.09
LRFN4-202ENST00000393952 RYR3Q15413 4870 aa15.59■□□□□ 0.09
LRFN4-202ENST00000393952 HINT1P49773 126 aaPredicted RBP15.59■□□□□ 0.09
LRFN4-202ENST00000393952 SDIM1Q6ZPB5 146 aa15.58■□□□□ 0.08
LRFN4-202ENST00000393952 A0A096LNI7 61 aa15.57■□□□□ 0.08
LRFN4-202ENST00000393952 FXYD2P54710 66 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms