RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 Q8N3U1 123 aa11.9□□□□□ -0.5
PTPA-207ENST00000393370 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.5
PTPA-207ENST00000393370 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
PTPA-207ENST00000393370 NDUFC1O43677 76 aa11.89□□□□□ -0.51
PTPA-207ENST00000393370 MIFP14174 115 aa11.89□□□□□ -0.51
PTPA-207ENST00000393370 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
PTPA-207ENST00000393370 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
PTPA-207ENST00000393370 ADORA2A-AS1P86434 159 aa11.87□□□□□ -0.51
PTPA-207ENST00000393370 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 FLNCQ14315 2725 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 A0A087WZ39 114 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 ATP5EP56381 51 aaPredicted RBP11.86□□□□□ -0.51
PTPA-207ENST00000393370 INSP01308 110 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 C6orf226Q5I0X4 101 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
PTPA-207ENST00000393370 C19orf84I3L1E1 186 aa11.85□□□□□ -0.51
PTPA-207ENST00000393370 LOC110117498A0A087WWA1 95 aa11.85□□□□□ -0.51
PTPA-207ENST00000393370 SCXQ7RTU7 201 aa11.85□□□□□ -0.51
PTPA-207ENST00000393370 LAMTOR3Q9UHA4 124 aa11.85□□□□□ -0.51
PTPA-207ENST00000393370 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
PTPA-207ENST00000393370 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
PTPA-207ENST00000393370 CXCL6P80162 114 aa11.83□□□□□ -0.52
PTPA-207ENST00000393370 TMEM254Q8TBM7 123 aa11.82□□□□□ -0.52
PTPA-207ENST00000393370 UBE2E2Q96LR5 201 aa11.82□□□□□ -0.52
PTPA-207ENST00000393370 MAP1AP78559 2803 aaPredicted RBP11.82□□□□□ -0.52
PTPA-207ENST00000393370 NREPQ16612 68 aa11.81□□□□□ -0.52
PTPA-207ENST00000393370 MAP6D1Q9H9H5 199 aa11.81□□□□□ -0.52
PTPA-207ENST00000393370 ZNF561-AS1K7EIQ3 104 aa11.81□□□□□ -0.52
PTPA-207ENST00000393370 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
PTPA-207ENST00000393370 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
PTPA-207ENST00000393370 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
PTPA-207ENST00000393370 C6orf223Q8N319 242 aa11.8□□□□□ -0.52
PTPA-207ENST00000393370 SLURP1P55000 103 aa11.8□□□□□ -0.52
PTPA-207ENST00000393370 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
PTPA-207ENST00000393370 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
PTPA-207ENST00000393370 IGHV4-61A0A0C4DH41 118 aa11.79□□□□□ -0.52
PTPA-207ENST00000393370 C1orf158Q8N1D5 194 aa11.79□□□□□ -0.52
PTPA-207ENST00000393370 PRB1P04280 392 aa11.78□□□□□ -0.52
PTPA-207ENST00000393370 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 IGHV4-59P01825 116 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 C18orf65Q6ZTR6 163 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 Q8NDZ9 215 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 UTP20O75691 2785 aaKnown RBP11.76□□□□□ -0.53
PTPA-207ENST00000393370 LRRK2Q5S007 2527 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 CENPEQ02224 2701 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 BPY2O14599 106 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 ESRGQ1W209 222 aa11.76□□□□□ -0.53
PTPA-207ENST00000393370 USP9XQ93008 2570 aaPredicted RBP11.76□□□□□ -0.53
PTPA-207ENST00000393370 LINC00959A0A1B0GUT2 108 aa11.75□□□□□ -0.53
PTPA-207ENST00000393370 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
PTPA-207ENST00000393370 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
PTPA-207ENST00000393370 BBC3Q96PG8 261 aaPredicted RBP11.74□□□□□ -0.53
PTPA-207ENST00000393370 NOTCH3Q9UM47 2321 aa11.74□□□□□ -0.53
PTPA-207ENST00000393370 C9orf66Q5T8R8 295 aa11.73□□□□□ -0.53
PTPA-207ENST00000393370 A0A1W2PRX2 142 aa11.73□□□□□ -0.53
PTPA-207ENST00000393370 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
PTPA-207ENST00000393370 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
PTPA-207ENST00000393370 GNLYP22749 145 aa11.72□□□□□ -0.53
PTPA-207ENST00000393370 KHDC1LQ5JSQ8 128 aa11.72□□□□□ -0.53
PTPA-207ENST00000393370 PRYO14603 147 aa11.72□□□□□ -0.53
PTPA-207ENST00000393370 Q6ZQY7 126 aa11.72□□□□□ -0.53
PTPA-207ENST00000393370 Q8IZM0 81 aa11.72□□□□□ -0.53
PTPA-207ENST00000393370 Q6ZTC4 211 aa11.71□□□□□ -0.53
PTPA-207ENST00000393370 FUSP35637 526 aaKnown RBP eCLIP11.71□□□□□ -0.54
PTPA-207ENST00000393370 C9orf116Q5BN46 136 aaPredicted RBP11.71□□□□□ -0.54
PTPA-207ENST00000393370 Q8N9L7 120 aa11.7□□□□□ -0.54
PTPA-207ENST00000393370 ERC2-IT1O76042 136 aa11.7□□□□□ -0.54
PTPA-207ENST00000393370 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
PTPA-207ENST00000393370 PDE6GP18545 87 aa11.69□□□□□ -0.54
PTPA-207ENST00000393370 CLPSL2Q6UWE3 100 aa11.68□□□□□ -0.54
PTPA-207ENST00000393370 PMAIP1Q13794 54 aa11.68□□□□□ -0.54
PTPA-207ENST00000393370 DEFB112Q30KQ8 113 aa11.68□□□□□ -0.54
PTPA-207ENST00000393370 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
PTPA-207ENST00000393370 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
PTPA-207ENST00000393370 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
PTPA-207ENST00000393370 PRR15Q8IV56 129 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 STHQ8IWL8 128 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 DYNLRB2Q8TF09 96 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 SPG11Q96JI7 2443 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
PTPA-207ENST00000393370 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
PTPA-207ENST00000393370 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 OCR1Q9BZK8 76 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 HIGD2AQ9BW72 106 aa11.66□□□□□ -0.54
PTPA-207ENST00000393370 TRGV4A0A0C4DH28 118 aa11.65□□□□□ -0.54
PTPA-207ENST00000393370 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
PTPA-207ENST00000393370 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.55
PTPA-207ENST00000393370 AKAP9Q99996 3911 aa11.64□□□□□ -0.55
PTPA-207ENST00000393370 MSMBP08118 114 aa11.64□□□□□ -0.55
PTPA-207ENST00000393370 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
PTPA-207ENST00000393370 DAD1P61803 113 aa11.64□□□□□ -0.55
PTPA-207ENST00000393370 DEFB114Q30KQ6 69 aa11.64□□□□□ -0.55
PTPA-207ENST00000393370 COX17Q14061 63 aa11.63□□□□□ -0.55
PTPA-207ENST00000393370 KIAA0087Q14695 138 aa11.63□□□□□ -0.55
PTPA-207ENST00000393370 LINC00269Q8N2A0 174 aa11.63□□□□□ -0.55
PTPA-207ENST00000393370 LINC01006Q8NI28 216 aa11.62□□□□□ -0.55
PTPA-207ENST00000393370 IGKV4-1P06312 121 aa11.61□□□□□ -0.55
PTPA-207ENST00000393370 Q6ZRU5 148 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms