RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TRBV10-2A0A0K0K1G8 114 aa10.27□□□□□ -0.77
MKS1-202ENST00000393119 ATXN8Q156A1 80 aa10.27□□□□□ -0.77
MKS1-202ENST00000393119 C11orf45Q8TAV5 145 aa10.27□□□□□ -0.77
MKS1-202ENST00000393119 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
MKS1-202ENST00000393119 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
MKS1-202ENST00000393119 LINC00269Q8N2A0 174 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 SMIM1B2RUZ4 78 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 TTC32Q5I0X7 151 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 ICOSQ9Y6W8 199 aa10.26□□□□□ -0.77
MKS1-202ENST00000393119 H7C423 109 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 LYPD5Q6UWN5 251 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 LITAFQ99732 161 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 TM2D3Q9BRN9 247 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
MKS1-202ENST00000393119 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.25□□□□□ -0.77
MKS1-202ENST00000393119 A0A0U1RRA0 63 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 TEX49A0A1B0GTD5 131 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 XCL1P47992 114 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 NPC2P61916 151 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 HERVK_113P63121 156 aa10.25□□□□□ -0.77
MKS1-202ENST00000393119 A0A0J9YXY3 114 aa10.24□□□□□ -0.77
MKS1-202ENST00000393119 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
MKS1-202ENST00000393119 ADAMTSL4-AS1Q5T5F5 129 aa10.24□□□□□ -0.77
MKS1-202ENST00000393119 DAND5Q8N907 189 aa10.24□□□□□ -0.77
MKS1-202ENST00000393119 NDUFA12Q9UI09 145 aa10.24□□□□□ -0.77
MKS1-202ENST00000393119 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
MKS1-202ENST00000393119 STAB2Q8WWQ8 2551 aa10.23□□□□□ -0.77
MKS1-202ENST00000393119 PRKDCP78527 4128 aaKnown RBP10.23□□□□□ -0.77
MKS1-202ENST00000393119 TRIAP1O43715 76 aa10.23□□□□□ -0.77
MKS1-202ENST00000393119 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
MKS1-202ENST00000393119 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
MKS1-202ENST00000393119 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
MKS1-202ENST00000393119 C15orf53Q8NAA6 179 aa10.23□□□□□ -0.77
MKS1-202ENST00000393119 FAM240AA0A1B0GVK7 77 aa10.22□□□□□ -0.77
MKS1-202ENST00000393119 WFDC10BQ8IUB3 73 aa10.22□□□□□ -0.77
MKS1-202ENST00000393119 UBE2WQ96B02 151 aa10.22□□□□□ -0.77
MKS1-202ENST00000393119 TOMM7Q9P0U1 55 aa10.22□□□□□ -0.77
MKS1-202ENST00000393119 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.77
MKS1-202ENST00000393119 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.77
MKS1-202ENST00000393119 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
MKS1-202ENST00000393119 HERV-K104P63124 156 aa10.21□□□□□ -0.77
MKS1-202ENST00000393119 ESRGQ1W209 222 aa10.21□□□□□ -0.77
MKS1-202ENST00000393119 H3BT86 120 aa10.21□□□□□ -0.78
MKS1-202ENST00000393119 Q9H8V8 135 aa10.21□□□□□ -0.78
MKS1-202ENST00000393119 SMIM20Q8N5G0 67 aa10.2□□□□□ -0.78
MKS1-202ENST00000393119 LELP1Q5T871 98 aa10.19□□□□□ -0.78
MKS1-202ENST00000393119 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
MKS1-202ENST00000393119 TRBV7-7A0A0K0K1E9 115 aa10.19□□□□□ -0.78
MKS1-202ENST00000393119 H7C2G1 150 aa10.18□□□□□ -0.78
MKS1-202ENST00000393119 REG3AQ06141 175 aa10.18□□□□□ -0.78
MKS1-202ENST00000393119 SPANXDQ9BXN6 97 aa10.18□□□□□ -0.78
MKS1-202ENST00000393119 SPANXCQ9NY87 97 aa10.18□□□□□ -0.78
MKS1-202ENST00000393119 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
MKS1-202ENST00000393119 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
MKS1-202ENST00000393119 PRSS2P07478 247 aa10.17□□□□□ -0.78
MKS1-202ENST00000393119 C2orf82Q6UX34 121 aa10.16□□□□□ -0.78
MKS1-202ENST00000393119 LST1O00453 97 aa10.16□□□□□ -0.78
MKS1-202ENST00000393119 Q1RN00 199 aa10.16□□□□□ -0.78
MKS1-202ENST00000393119 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
MKS1-202ENST00000393119 ENHOQ6UWT2 76 aa10.15□□□□□ -0.78
MKS1-202ENST00000393119 NDUFA1O15239 70 aa10.15□□□□□ -0.79
MKS1-202ENST00000393119 SS18Q15532 418 aa10.15□□□□□ -0.79
MKS1-202ENST00000393119 LINC00526Q96FQ7 95 aa10.15□□□□□ -0.79
MKS1-202ENST00000393119 A0A087WZ39 114 aa10.14□□□□□ -0.79
MKS1-202ENST00000393119 DNAH7Q8WXX0 4024 aa10.14□□□□□ -0.79
MKS1-202ENST00000393119 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
MKS1-202ENST00000393119 MIAQ16674 131 aa10.13□□□□□ -0.79
MKS1-202ENST00000393119 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
MKS1-202ENST00000393119 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
MKS1-202ENST00000393119 H3BNG1 76 aa10.11□□□□□ -0.79
MKS1-202ENST00000393119 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
MKS1-202ENST00000393119 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
MKS1-202ENST00000393119 CLEC2BQ92478 149 aa10.1□□□□□ -0.79
MKS1-202ENST00000393119 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
MKS1-202ENST00000393119 PLECQ15149 4684 aaKnown RBP10.1□□□□□ -0.79
MKS1-202ENST00000393119 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
MKS1-202ENST00000393119 TRAV10A0A0B4J240 114 aa10.09□□□□□ -0.79
MKS1-202ENST00000393119 TIMM17BO60830 172 aa10.09□□□□□ -0.79
MKS1-202ENST00000393119 DNAH1Q9P2D7 4330 aa10.09□□□□□ -0.79
MKS1-202ENST00000393119 COX6CP09669 75 aa10.09□□□□□ -0.79
MKS1-202ENST00000393119 CD164L2Q6UWJ8 174 aa10.09□□□□□ -0.79
MKS1-202ENST00000393119 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
MKS1-202ENST00000393119 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
MKS1-202ENST00000393119 PFN2P35080 140 aa10.08□□□□□ -0.8
MKS1-202ENST00000393119 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
MKS1-202ENST00000393119 LINC00588Q9Y4M8 146 aa10.08□□□□□ -0.8
MKS1-202ENST00000393119 DNAH10Q8IVF4 4471 aa10.07□□□□□ -0.8
MKS1-202ENST00000393119 COX7A2LO14548 114 aa10.07□□□□□ -0.8
MKS1-202ENST00000393119 ACYP1P07311 99 aa10.07□□□□□ -0.8
MKS1-202ENST00000393119 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
MKS1-202ENST00000393119 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
MKS1-202ENST00000393119 MALP21145 153 aa10.06□□□□□ -0.8
MKS1-202ENST00000393119 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
MKS1-202ENST00000393119 B9D2Q9BPU9 175 aa10.06□□□□□ -0.8
MKS1-202ENST00000393119 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
MKS1-202ENST00000393119 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms