RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 C3orf79P0CE67 100 aa12.79□□□□□ -0.36
CDPF1-202ENST00000381037 PANO1I0J062 215 aa12.78□□□□□ -0.36
CDPF1-202ENST00000381037 HAMPP81172 84 aa12.78□□□□□ -0.36
CDPF1-202ENST00000381037 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
CDPF1-202ENST00000381037 CAMK2N2Q96S95 79 aa12.78□□□□□ -0.36
CDPF1-202ENST00000381037 F8WDY8 70 aa12.77□□□□□ -0.36
CDPF1-202ENST00000381037 CIRBPQ14011 172 aaKnown RBP12.77□□□□□ -0.36
CDPF1-202ENST00000381037 MIEN1Q9BRT3 115 aa12.77□□□□□ -0.36
CDPF1-202ENST00000381037 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.36
CDPF1-202ENST00000381037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.77□□□□□ -0.36
CDPF1-202ENST00000381037 TRAV12-1A0A0B4J245 112 aa12.77□□□□□ -0.37
CDPF1-202ENST00000381037 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.37
CDPF1-202ENST00000381037 LEPROTL1O95214 131 aa12.77□□□□□ -0.37
CDPF1-202ENST00000381037 C20orf202A1L168 122 aa12.76□□□□□ -0.37
CDPF1-202ENST00000381037 SCXQ7RTU7 201 aa12.76□□□□□ -0.37
CDPF1-202ENST00000381037 C10orf25Q5T742 122 aa12.75□□□□□ -0.37
CDPF1-202ENST00000381037 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
CDPF1-202ENST00000381037 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
CDPF1-202ENST00000381037 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
CDPF1-202ENST00000381037 UNQ6190/PRO20217Q6UXQ8 127 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 Q8IZM0 81 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 CIRBP-AS1Q8TBR5 109 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 CHTOPQ9Y3Y2 248 aaKnown RBP12.73□□□□□ -0.37
CDPF1-202ENST00000381037 NDUFA1O15239 70 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 CHTF8P0CG12 524 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 C2orf82Q6UX34 121 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 PAM16Q9Y3D7 125 aa12.73□□□□□ -0.37
CDPF1-202ENST00000381037 M0R143 59 aa12.72□□□□□ -0.37
CDPF1-202ENST00000381037 SPINK8P0C7L1 97 aa12.71□□□□□ -0.37
CDPF1-202ENST00000381037 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
CDPF1-202ENST00000381037 C6orf48Q9UBA6 75 aa12.71□□□□□ -0.37
CDPF1-202ENST00000381037 HSPB8Q9UJY1 196 aa12.71□□□□□ -0.37
CDPF1-202ENST00000381037 A0A096LNI7 61 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 F8VRH5 84 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 ODF1Q14990 250 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 Q8N1X5 172 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 H3BRM9 83 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
CDPF1-202ENST00000381037 PRSS2P07478 247 aa12.69□□□□□ -0.38
CDPF1-202ENST00000381037 LOC107984640A0A0U1RRK4 108 aa12.68□□□□□ -0.38
CDPF1-202ENST00000381037 SMR3BP02814 79 aaPredicted RBP12.68□□□□□ -0.38
CDPF1-202ENST00000381037 PET117Q6UWS5 81 aa12.68□□□□□ -0.38
CDPF1-202ENST00000381037 PKIGQ9Y2B9 76 aa12.68□□□□□ -0.38
CDPF1-202ENST00000381037 TRBV30A0A0K0K1B3 111 aa12.67□□□□□ -0.38
CDPF1-202ENST00000381037 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
CDPF1-202ENST00000381037 MAP1LC3CQ9BXW4 147 aa12.67□□□□□ -0.38
CDPF1-202ENST00000381037 IGKV2-24A0A0C4DH68 120 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 SYS1-DBNDD2H3BUS1 97 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 TLX1NBP0CAT3 122 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 SNHG12Q9BXW3 62 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 KRTAP4-5Q9BYR2 181 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 A0A087WYN8 130 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 PTTG1IPP53801 180 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 CKS1BP61024 79 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
CDPF1-202ENST00000381037 PLAC8Q9NZF1 115 aa12.65□□□□□ -0.38
CDPF1-202ENST00000381037 VPS13BQ7Z7G8 4022 aa12.64□□□□□ -0.39
CDPF1-202ENST00000381037 H0Y8G0 127 aa12.64□□□□□ -0.39
CDPF1-202ENST00000381037 CXCL5P42830 114 aa12.64□□□□□ -0.39
CDPF1-202ENST00000381037 LINC00474Q9P2X8 69 aa12.64□□□□□ -0.39
CDPF1-202ENST00000381037 MAJINQ3KP22 176 aa12.63□□□□□ -0.39
CDPF1-202ENST00000381037 C9orf116Q5BN46 136 aaPredicted RBP12.63□□□□□ -0.39
CDPF1-202ENST00000381037 Q6ZRP5 223 aa12.63□□□□□ -0.39
CDPF1-202ENST00000381037 SRRM2Q9UQ35 2752 aaKnown RBP12.63□□□□□ -0.39
CDPF1-202ENST00000381037 ABCA13Q86UQ4 5058 aa12.63□□□□□ -0.39
CDPF1-202ENST00000381037 TMEM223A0PJW6 202 aa12.62□□□□□ -0.39
CDPF1-202ENST00000381037 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
CDPF1-202ENST00000381037 A0A1B0GV90 55 aa12.62□□□□□ -0.39
CDPF1-202ENST00000381037 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
CDPF1-202ENST00000381037 RPL18AQ02543 176 aaKnown RBP12.61□□□□□ -0.39
CDPF1-202ENST00000381037 DPH3Q96FX2 82 aa12.61□□□□□ -0.39
CDPF1-202ENST00000381037 NDUFC2-KCTD14E9PQ53 114 aa12.6□□□□□ -0.39
CDPF1-202ENST00000381037 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
CDPF1-202ENST00000381037 STPG4Q8N801 248 aa12.6□□□□□ -0.39
CDPF1-202ENST00000381037 HSBP1L1C9JCN9 74 aa12.59□□□□□ -0.39
CDPF1-202ENST00000381037 PMCHL2Q9BQD1 86 aa12.59□□□□□ -0.39
CDPF1-202ENST00000381037 PLNP26678 52 aa12.59□□□□□ -0.39
CDPF1-202ENST00000381037 HNRNPA3P51991 378 aaKnown RBP12.59□□□□□ -0.39
CDPF1-202ENST00000381037 Q5VSD8 79 aa12.59□□□□□ -0.39
CDPF1-202ENST00000381037 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
CDPF1-202ENST00000381037 PCLOQ9Y6V0 5065 aa12.58□□□□□ -0.4
CDPF1-202ENST00000381037 DPM2O94777 84 aa12.58□□□□□ -0.4
CDPF1-202ENST00000381037 A0A1W2PNN7 141 aa12.57□□□□□ -0.4
CDPF1-202ENST00000381037 ATOH7Q8N100 152 aa12.57□□□□□ -0.4
CDPF1-202ENST00000381037 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
CDPF1-202ENST00000381037 IGKCP01834 107 aa12.55□□□□□ -0.4
CDPF1-202ENST00000381037 GAGE2EQ4V326 116 aa12.55□□□□□ -0.4
CDPF1-202ENST00000381037 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
CDPF1-202ENST00000381037 GAGE2DQ9UEU5 116 aa12.55□□□□□ -0.4
CDPF1-202ENST00000381037 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
CDPF1-202ENST00000381037 COL5A1-AS1Q5SY13 56 aa12.54□□□□□ -0.4
CDPF1-202ENST00000381037 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
CDPF1-202ENST00000381037 KRTAP7-1Q8IUC3 87 aa12.52□□□□□ -0.4
CDPF1-202ENST00000381037 SFTA2Q6UW10 78 aa12.51□□□□□ -0.41
CDPF1-202ENST00000381037 FAM168BA1KXE4 195 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms