RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 H3BRM9 83 aa8.21□□□□□ -1.1
SMN2-203ENST00000380743 KRTDAPP60985 99 aa8.21□□□□□ -1.1
SMN2-203ENST00000380743 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
SMN2-203ENST00000380743 TMA7Q9Y2S6 64 aaKnown RBP8.2□□□□□ -1.1
SMN2-203ENST00000380743 GCSHP23434 173 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 PLNP26678 52 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 PET117Q6UWS5 81 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.19□□□□□ -1.1
SMN2-203ENST00000380743 IGLV5-39A0A0G2JS06 123 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 DPM2O94777 84 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 Q6ZRU5 148 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 Q8IZM0 81 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 CAMK2N2Q96S95 79 aa8.19□□□□□ -1.1
SMN2-203ENST00000380743 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 IGKCP01834 107 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 KRTAP10-1P60331 282 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 C10orf25Q5T742 122 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 C2orf82Q6UX34 121 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 UNQ6190/PRO20217Q6UXQ8 127 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
SMN2-203ENST00000380743 PRSS2P07478 247 aa8.17□□□□□ -1.1
SMN2-203ENST00000380743 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
SMN2-203ENST00000380743 NDUFA1O15239 70 aa8.16□□□□□ -1.1
SMN2-203ENST00000380743 RYR1P21817 5038 aa8.15□□□□□ -1.1
SMN2-203ENST00000380743 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.1
SMN2-203ENST00000380743 F8WDY8 70 aa8.15□□□□□ -1.1
SMN2-203ENST00000380743 CKS1BP61024 79 aa8.15□□□□□ -1.1
SMN2-203ENST00000380743 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
SMN2-203ENST00000380743 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
SMN2-203ENST00000380743 HSPG2P98160 4391 aa8.14□□□□□ -1.11
SMN2-203ENST00000380743 KRTAP4-12Q9BQ66 201 aa8.13□□□□□ -1.11
SMN2-203ENST00000380743 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
SMN2-203ENST00000380743 C20orf202A1L168 122 aa8.13□□□□□ -1.11
SMN2-203ENST00000380743 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
SMN2-203ENST00000380743 FAM30AQ9NZY2 134 aa8.13□□□□□ -1.11
SMN2-203ENST00000380743 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
SMN2-203ENST00000380743 CXCL5P42830 114 aa8.12□□□□□ -1.11
SMN2-203ENST00000380743 RNF151Q2KHN1 245 aa8.12□□□□□ -1.11
SMN2-203ENST00000380743 STPG4Q8N801 248 aa8.12□□□□□ -1.11
SMN2-203ENST00000380743 ATOH7Q8N100 152 aa8.11□□□□□ -1.11
SMN2-203ENST00000380743 PANO1I0J062 215 aa8.1□□□□□ -1.11
SMN2-203ENST00000380743 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
SMN2-203ENST00000380743 HERVK_113P61574 105 aa8.1□□□□□ -1.11
SMN2-203ENST00000380743 Q6ZSA8 131 aa8.1□□□□□ -1.11
SMN2-203ENST00000380743 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
SMN2-203ENST00000380743 LEPROTO15243 131 aa8.09□□□□□ -1.11
SMN2-203ENST00000380743 CHTF8P0CG12 524 aa8.09□□□□□ -1.11
SMN2-203ENST00000380743 ZNF625Q96I27 306 aaPredicted RBP8.09□□□□□ -1.11
SMN2-203ENST00000380743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
SMN2-203ENST00000380743 A0A096LNI7 61 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 E9PLD3 99 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 Q6ZRP5 223 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 J3QQQ9 107 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 SCGB1D1O95968 90 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 AKR1D1P51857 326 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 HAMPP81172 84 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 RPL18AQ02543 176 aaKnown RBP8.08□□□□□ -1.12
SMN2-203ENST00000380743 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
SMN2-203ENST00000380743 NDUFC2-KCTD14E9PQ53 114 aa8.07□□□□□ -1.12
SMN2-203ENST00000380743 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
SMN2-203ENST00000380743 XGP55808 180 aa8.07□□□□□ -1.12
SMN2-203ENST00000380743 NDUFA12Q9UI09 145 aa8.07□□□□□ -1.12
SMN2-203ENST00000380743 FAT1Q14517 4588 aa8.06□□□□□ -1.12
SMN2-203ENST00000380743 IGKV2D-26A0A0A0MRZ7 120 aa8.06□□□□□ -1.12
SMN2-203ENST00000380743 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
SMN2-203ENST00000380743 MAJINQ3KP22 176 aa8.06□□□□□ -1.12
SMN2-203ENST00000380743 SFTA2Q6UW10 78 aa8.06□□□□□ -1.12
SMN2-203ENST00000380743 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
SMN2-203ENST00000380743 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
SMN2-203ENST00000380743 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
SMN2-203ENST00000380743 CDK2AP2O75956 126 aa8.05□□□□□ -1.12
SMN2-203ENST00000380743 LGALS3P17931 250 aaKnown RBP8.05□□□□□ -1.12
SMN2-203ENST00000380743 GAGE2EQ4V326 116 aa8.05□□□□□ -1.12
SMN2-203ENST00000380743 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
SMN2-203ENST00000380743 GAGE2DQ9UEU5 116 aa8.05□□□□□ -1.12
SMN2-203ENST00000380743 MYMXA0A1B0GTQ4 84 aa8.04□□□□□ -1.12
SMN2-203ENST00000380743 PFN2P35080 140 aa8.04□□□□□ -1.12
SMN2-203ENST00000380743 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
SMN2-203ENST00000380743 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
SMN2-203ENST00000380743 ERG28Q9UKR5 140 aa8.04□□□□□ -1.12
SMN2-203ENST00000380743 HERC2O95714 4834 aa8.04□□□□□ -1.12
SMN2-203ENST00000380743 NMUP48645 174 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 A0A087WYN8 130 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
SMN2-203ENST00000380743 HERV-K104P63124 156 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 JOSD1Q15040 202 aaPredicted RBP8.03□□□□□ -1.12
SMN2-203ENST00000380743 TTTY13Q9BZ97 58 aa8.03□□□□□ -1.12
SMN2-203ENST00000380743 COX17Q14061 63 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms