RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 COX7CP15954 63 aa8.06□□□□□ -1.12
SMAD9-202ENST00000379826 C9orf116Q5BN46 136 aaPredicted RBP8.06□□□□□ -1.12
SMAD9-202ENST00000379826 SPAG11BQ08648 103 aa8.06□□□□□ -1.12
SMAD9-202ENST00000379826 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
SMAD9-202ENST00000379826 SCXQ7RTU7 201 aa8.06□□□□□ -1.12
SMAD9-202ENST00000379826 SMCR5Q8TEV8 140 aa8.06□□□□□ -1.12
SMAD9-202ENST00000379826 ADGRG4Q8IZF6 3080 aa8.06□□□□□ -1.12
SMAD9-202ENST00000379826 JMJD1CQ15652 2540 aa8.05□□□□□ -1.12
SMAD9-202ENST00000379826 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
SMAD9-202ENST00000379826 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
SMAD9-202ENST00000379826 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
SMAD9-202ENST00000379826 TRBV7-7A0A0K0K1E9 115 aa8.05□□□□□ -1.12
SMAD9-202ENST00000379826 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
SMAD9-202ENST00000379826 ZZEF1O43149 2961 aa8.04□□□□□ -1.12
SMAD9-202ENST00000379826 USP17L23D6RBM5 183 aa8.04□□□□□ -1.12
SMAD9-202ENST00000379826 KALRNO60229 2985 aa8.04□□□□□ -1.12
SMAD9-202ENST00000379826 HIGD2BQ4VC39 106 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 LRBAP50851 2863 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
SMAD9-202ENST00000379826 FHL2Q14192 279 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 NKAPP1Q8N9T2 125 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 CSMD1Q96PZ7 3565 aa8.03□□□□□ -1.12
SMAD9-202ENST00000379826 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
SMAD9-202ENST00000379826 CAMK2N2Q96S95 79 aa8.02□□□□□ -1.13
SMAD9-202ENST00000379826 LINC00846Q9NV44 126 aa8.02□□□□□ -1.13
SMAD9-202ENST00000379826 IGHV4-28A0A0C4DH34 117 aa8.02□□□□□ -1.13
SMAD9-202ENST00000379826 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
SMAD9-202ENST00000379826 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
SMAD9-202ENST00000379826 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.13
SMAD9-202ENST00000379826 EPG5Q9HCE0 2579 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 IGHV4-30-4P0DP06 118 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 DMXL2Q8TDJ6 3036 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 SERP2Q8N6R1 65 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 Q6JHZ5 121 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 A0A087WZ39 114 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 ZFYVE26Q68DK2 2539 aa8.01□□□□□ -1.13
SMAD9-202ENST00000379826 CCKP06307 115 aa8□□□□□ -1.13
SMAD9-202ENST00000379826 CFAP47Q6ZTR5 3102 aa8□□□□□ -1.13
SMAD9-202ENST00000379826 J3QL48 77 aa8□□□□□ -1.13
SMAD9-202ENST00000379826 DIRC1Q969H9 104 aa8□□□□□ -1.13
SMAD9-202ENST00000379826 A8MTW9 85 aa8□□□□□ -1.13
SMAD9-202ENST00000379826 MUC7Q8TAX7 377 aa8□□□□□ -1.13
SMAD9-202ENST00000379826 Q8N814 137 aa7.99□□□□□ -1.13
SMAD9-202ENST00000379826 F8WEM9 126 aa7.99□□□□□ -1.13
SMAD9-202ENST00000379826 TACC2O95359 2948 aa7.99□□□□□ -1.13
SMAD9-202ENST00000379826 MIFP14174 115 aa7.99□□□□□ -1.13
SMAD9-202ENST00000379826 C1orf134Q5TEV5 83 aa7.98□□□□□ -1.13
SMAD9-202ENST00000379826 Q8IZM0 81 aa7.98□□□□□ -1.13
SMAD9-202ENST00000379826 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
SMAD9-202ENST00000379826 FLNBO75369 2602 aaKnown RBP7.98□□□□□ -1.13
SMAD9-202ENST00000379826 C6orf223Q8N319 242 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 SVIPQ8NHG7 77 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 FAM104AQ969W3 186 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 C16orf95Q9H693 158 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 NANOS2P60321 138 aaKnown RBP7.97□□□□□ -1.13
SMAD9-202ENST00000379826 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 COX7BP24311 80 aa7.97□□□□□ -1.13
SMAD9-202ENST00000379826 Q6ZQY7 126 aa7.96□□□□□ -1.14
SMAD9-202ENST00000379826 UNQ6190/PRO20217Q6UXQ8 127 aa7.95□□□□□ -1.14
SMAD9-202ENST00000379826 FAM19A1Q7Z5A9 133 aa7.95□□□□□ -1.14
SMAD9-202ENST00000379826 RETNQ9HD89 108 aa7.95□□□□□ -1.14
SMAD9-202ENST00000379826 DMXL1Q9Y485 3027 aa7.95□□□□□ -1.14
SMAD9-202ENST00000379826 SMIM9A6NGZ8 99 aa7.94□□□□□ -1.14
SMAD9-202ENST00000379826 TMEM258P61165 79 aa7.94□□□□□ -1.14
SMAD9-202ENST00000379826 Q8N3U1 123 aa7.94□□□□□ -1.14
SMAD9-202ENST00000379826 C3orf84H3BNL1 204 aa7.94□□□□□ -1.14
SMAD9-202ENST00000379826 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.93□□□□□ -1.14
SMAD9-202ENST00000379826 IGHV3OR16-9A0A0B4J2B5 98 aa7.93□□□□□ -1.14
SMAD9-202ENST00000379826 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
SMAD9-202ENST00000379826 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
SMAD9-202ENST00000379826 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
SMAD9-202ENST00000379826 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
SMAD9-202ENST00000379826 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
SMAD9-202ENST00000379826 ATP5EP2Q5VTU8 51 aa7.93□□□□□ -1.14
SMAD9-202ENST00000379826 NREPQ16612 68 aa7.92□□□□□ -1.14
SMAD9-202ENST00000379826 MDFIQ99750 246 aa7.92□□□□□ -1.14
SMAD9-202ENST00000379826 CYSRT1A8MQ03 144 aa7.92□□□□□ -1.14
SMAD9-202ENST00000379826 ATMQ13315 3056 aa7.92□□□□□ -1.14
SMAD9-202ENST00000379826 KIR2DL5BQ8NHK3 375 aa7.92□□□□□ -1.14
SMAD9-202ENST00000379826 COX17Q14061 63 aa7.91□□□□□ -1.14
SMAD9-202ENST00000379826 C9orf129Q5T035 196 aaKnown RBP7.91□□□□□ -1.14
SMAD9-202ENST00000379826 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
SMAD9-202ENST00000379826 UBE2AP49459 152 aa7.9□□□□□ -1.15
SMAD9-202ENST00000379826 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
SMAD9-202ENST00000379826 TRBV10-3A0A0K0K1G6 114 aa7.89□□□□□ -1.15
SMAD9-202ENST00000379826 FAM229AH3BQW9 127 aa7.89□□□□□ -1.15
SMAD9-202ENST00000379826 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
SMAD9-202ENST00000379826 IGLV5-52A0A0A0MRZ9 124 aa7.88□□□□□ -1.15
SMAD9-202ENST00000379826 F8P00451 2351 aa7.87□□□□□ -1.15
SMAD9-202ENST00000379826 RELNP78509 3460 aa7.87□□□□□ -1.15
SMAD9-202ENST00000379826 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
SMAD9-202ENST00000379826 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
SMAD9-202ENST00000379826 SVEP1Q4LDE5 3571 aa7.86□□□□□ -1.15
SMAD9-202ENST00000379826 NDUFC2O95298 119 aa7.86□□□□□ -1.15
SMAD9-202ENST00000379826 ETDCA0A1B0GVM5 59 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms