RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 A0A087WYN8 130 aa12.57□□□□□ -0.4
TDP2-202ENST00000378198 C9orf66Q5T8R8 295 aa12.57□□□□□ -0.4
TDP2-202ENST00000378198 LINC00643Q86TS7 51 aa12.57□□□□□ -0.4
TDP2-202ENST00000378198 LY6G6DO95868 133 aa12.56□□□□□ -0.4
TDP2-202ENST00000378198 SDIM1Q6ZPB5 146 aa12.56□□□□□ -0.4
TDP2-202ENST00000378198 OR13C6PQ8NH95 151 aa12.56□□□□□ -0.4
TDP2-202ENST00000378198 SMR3AQ99954 134 aa12.56□□□□□ -0.4
TDP2-202ENST00000378198 C2CD3Q4AC94 2353 aa12.56□□□□□ -0.4
TDP2-202ENST00000378198 A0A096LPF7 62 aa12.55□□□□□ -0.4
TDP2-202ENST00000378198 CLPSL2Q6UWE3 100 aa12.55□□□□□ -0.4
TDP2-202ENST00000378198 SMCR5Q8TEV8 140 aa12.54□□□□□ -0.4
TDP2-202ENST00000378198 CD164L2Q6UWJ8 174 aa12.53□□□□□ -0.4
TDP2-202ENST00000378198 LECT2O14960 151 aa12.52□□□□□ -0.41
TDP2-202ENST00000378198 ATP5G1P05496 136 aa12.52□□□□□ -0.41
TDP2-202ENST00000378198 CXCL5P42830 114 aa12.52□□□□□ -0.41
TDP2-202ENST00000378198 LINC00269Q8N2A0 174 aa12.52□□□□□ -0.41
TDP2-202ENST00000378198 COX17Q14061 63 aa12.51□□□□□ -0.41
TDP2-202ENST00000378198 GAGE2AQ6NT46 116 aa12.51□□□□□ -0.41
TDP2-202ENST00000378198 B5MCH6 92 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 APOC4P55056 127 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 KIAA0087Q14695 138 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 CFAP161Q6P656 301 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 ACANP16112 2415 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 CCDC179H3BU77 68 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 DEFB135Q30KP9 77 aa12.5□□□□□ -0.41
TDP2-202ENST00000378198 CHCHD10Q8WYQ3 142 aaPredicted RBP12.49□□□□□ -0.41
TDP2-202ENST00000378198 OBSCN-AS1Q96MR7 158 aa12.49□□□□□ -0.41
TDP2-202ENST00000378198 NDUFC2O95298 119 aa12.49□□□□□ -0.41
TDP2-202ENST00000378198 ANGP03950 147 aaKnown RBP12.48□□□□□ -0.41
TDP2-202ENST00000378198 DAD1P61803 113 aa12.48□□□□□ -0.41
TDP2-202ENST00000378198 REG3AQ06141 175 aa12.48□□□□□ -0.41
TDP2-202ENST00000378198 TENM4Q6N022 2769 aa12.48□□□□□ -0.41
TDP2-202ENST00000378198 IGHV4-28A0A0C4DH34 117 aa12.47□□□□□ -0.41
TDP2-202ENST00000378198 DEFB4AO15263 64 aa12.47□□□□□ -0.41
TDP2-202ENST00000378198 SPATA3Q8NHX4 192 aa12.47□□□□□ -0.41
TDP2-202ENST00000378198 SETD2Q9BYW2 2564 aaPredicted RBP12.47□□□□□ -0.41
TDP2-202ENST00000378198 NIPBLQ6KC79 2804 aaeCLIP12.47□□□□□ -0.41
TDP2-202ENST00000378198 ORMDL1Q9P0S3 153 aa12.46□□□□□ -0.41
TDP2-202ENST00000378198 A0A1B0GX51 115 aa12.46□□□□□ -0.42
TDP2-202ENST00000378198 C9orf129Q5T035 196 aaKnown RBP12.45□□□□□ -0.42
TDP2-202ENST00000378198 C14orf132Q9NPU4 83 aa12.45□□□□□ -0.42
TDP2-202ENST00000378198 KLK5Q9Y337 293 aaPredicted RBP12.45□□□□□ -0.42
TDP2-202ENST00000378198 FAM236AA0A1B0GUQ0 79 aa12.44□□□□□ -0.42
TDP2-202ENST00000378198 FAM236BA0A1B0GV22 79 aa12.44□□□□□ -0.42
TDP2-202ENST00000378198 MIFP14174 115 aa12.44□□□□□ -0.42
TDP2-202ENST00000378198 IGLV10-54A0A075B6I4 117 aa12.44□□□□□ -0.42
TDP2-202ENST00000378198 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
TDP2-202ENST00000378198 NANOS2P60321 138 aaKnown RBP12.43□□□□□ -0.42
TDP2-202ENST00000378198 LINC00167Q96N53 147 aa12.43□□□□□ -0.42
TDP2-202ENST00000378198 SS18L2Q9UHA2 77 aa12.43□□□□□ -0.42
TDP2-202ENST00000378198 SLPIP03973 132 aa12.42□□□□□ -0.42
TDP2-202ENST00000378198 Q8N3U1 123 aa12.42□□□□□ -0.42
TDP2-202ENST00000378198 MTORP42345 2549 aa12.42□□□□□ -0.42
TDP2-202ENST00000378198 Q8NAQ8 132 aa12.42□□□□□ -0.42
TDP2-202ENST00000378198 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
TDP2-202ENST00000378198 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
TDP2-202ENST00000378198 SPART-AS1P0CW21 52 aa12.4□□□□□ -0.42
TDP2-202ENST00000378198 LELP1Q5T871 98 aa12.4□□□□□ -0.42
TDP2-202ENST00000378198 HIVEP2P31629 2446 aa12.4□□□□□ -0.43
TDP2-202ENST00000378198 NCR3O14931 201 aa12.39□□□□□ -0.43
TDP2-202ENST00000378198 Q8N814 137 aa12.39□□□□□ -0.43
TDP2-202ENST00000378198 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
TDP2-202ENST00000378198 FN1P02751 2386 aaKnown RBP12.38□□□□□ -0.43
TDP2-202ENST00000378198 C9orf116Q5BN46 136 aaPredicted RBP12.38□□□□□ -0.43
TDP2-202ENST00000378198 INAFM1C9JVW0 142 aa12.38□□□□□ -0.43
TDP2-202ENST00000378198 JMJD7-PLA2G4BH0Y9G9 81 aa12.36□□□□□ -0.43
TDP2-202ENST00000378198 TMEM256-PLSCR3K7ERE1 68 aa12.36□□□□□ -0.43
TDP2-202ENST00000378198 HTN3P15516 51 aa12.35□□□□□ -0.43
TDP2-202ENST00000378198 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
TDP2-202ENST00000378198 Q6JHZ5 121 aa12.35□□□□□ -0.43
TDP2-202ENST00000378198 LINC00846Q9NV44 126 aa12.35□□□□□ -0.43
TDP2-202ENST00000378198 ITPR2Q14571 2701 aa12.35□□□□□ -0.43
TDP2-202ENST00000378198 PRR34Q9NV39 138 aa12.34□□□□□ -0.43
TDP2-202ENST00000378198 CCKP06307 115 aa12.34□□□□□ -0.43
TDP2-202ENST00000378198 S100A7L2Q5SY68 101 aa12.34□□□□□ -0.43
TDP2-202ENST00000378198 A0A0J9YWU9 116 aa12.33□□□□□ -0.44
TDP2-202ENST00000378198 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
TDP2-202ENST00000378198 C6orf99Q4VX62 202 aa12.33□□□□□ -0.44
TDP2-202ENST00000378198 UNQ6190/PRO20217Q6UXQ8 127 aa12.33□□□□□ -0.44
TDP2-202ENST00000378198 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
TDP2-202ENST00000378198 C6orf223Q8N319 242 aa12.32□□□□□ -0.44
TDP2-202ENST00000378198 Q8NDZ9 215 aa12.32□□□□□ -0.44
TDP2-202ENST00000378198 KLK12Q9UKR0 248 aa12.31□□□□□ -0.44
TDP2-202ENST00000378198 CYSRT1A8MQ03 144 aa12.31□□□□□ -0.44
TDP2-202ENST00000378198 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
TDP2-202ENST00000378198 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
TDP2-202ENST00000378198 WIPF1O43516 503 aa12.29□□□□□ -0.44
TDP2-202ENST00000378198 ENHOQ6UWT2 76 aa12.29□□□□□ -0.44
TDP2-202ENST00000378198 LINC00575Q6W349 94 aa12.29□□□□□ -0.44
TDP2-202ENST00000378198 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
TDP2-202ENST00000378198 UQCRQO14949 82 aa12.28□□□□□ -0.44
TDP2-202ENST00000378198 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
TDP2-202ENST00000378198 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
TDP2-202ENST00000378198 GCN1Q92616 2671 aaKnown RBP12.27□□□□□ -0.44
TDP2-202ENST00000378198 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
TDP2-202ENST00000378198 ATOX1O00244 68 aa12.27□□□□□ -0.45
TDP2-202ENST00000378198 LINC00526Q96FQ7 95 aa12.26□□□□□ -0.45
TDP2-202ENST00000378198 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
TDP2-202ENST00000378198 hADV29S1A0JD25 119 aa12.25□□□□□ -0.45
TDP2-202ENST00000378198 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms