RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.03
PCDHA9-201ENST00000378122 A0A096LNJ9 63 aa8.65□□□□□ -1.03
PCDHA9-201ENST00000378122 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
PCDHA9-201ENST00000378122 AGRNO00468 2067 aa8.64□□□□□ -1.03
PCDHA9-201ENST00000378122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.64□□□□□ -1.03
PCDHA9-201ENST00000378122 PRR3P79522 188 aaKnown RBP8.64□□□□□ -1.03
PCDHA9-201ENST00000378122 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
PCDHA9-201ENST00000378122 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
PCDHA9-201ENST00000378122 NTM-AS1Q6ZSK4 140 aa8.63□□□□□ -1.03
PCDHA9-201ENST00000378122 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
PCDHA9-201ENST00000378122 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
PCDHA9-201ENST00000378122 CYSRT1A8MQ03 144 aa8.62□□□□□ -1.03
PCDHA9-201ENST00000378122 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
PCDHA9-201ENST00000378122 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
PCDHA9-201ENST00000378122 MDFIQ99750 246 aa8.61□□□□□ -1.03
PCDHA9-201ENST00000378122 IGHV6-1A0A0B4J1U7 121 aa8.6□□□□□ -1.03
PCDHA9-201ENST00000378122 C6orf223Q8N319 242 aa8.6□□□□□ -1.03
PCDHA9-201ENST00000378122 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
PCDHA9-201ENST00000378122 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
PCDHA9-201ENST00000378122 CSDC2Q9Y534 153 aaKnown RBP8.59□□□□□ -1.03
PCDHA9-201ENST00000378122 Q6ZSN1 163 aa8.59□□□□□ -1.03
PCDHA9-201ENST00000378122 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.03
PCDHA9-201ENST00000378122 CDIP1Q9H305 208 aa8.59□□□□□ -1.04
PCDHA9-201ENST00000378122 KRTAP24-1Q3LI83 254 aa8.58□□□□□ -1.04
PCDHA9-201ENST00000378122 Q8N9L7 120 aa8.58□□□□□ -1.04
PCDHA9-201ENST00000378122 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
PCDHA9-201ENST00000378122 ESRGQ1W209 222 aa8.57□□□□□ -1.04
PCDHA9-201ENST00000378122 AMELXQ99217 191 aa8.57□□□□□ -1.04
PCDHA9-201ENST00000378122 MRGPRG-AS1Q2M3A8 158 aa8.57□□□□□ -1.04
PCDHA9-201ENST00000378122 PMAIP1Q13794 54 aa8.55□□□□□ -1.04
PCDHA9-201ENST00000378122 ODF3L2Q3SX64 289 aa8.55□□□□□ -1.04
PCDHA9-201ENST00000378122 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
PCDHA9-201ENST00000378122 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
PCDHA9-201ENST00000378122 PSPHP1O15172 72 aa8.54□□□□□ -1.04
PCDHA9-201ENST00000378122 COX8CQ7Z4L0 72 aa8.54□□□□□ -1.04
PCDHA9-201ENST00000378122 Q8N3U1 123 aa8.54□□□□□ -1.04
PCDHA9-201ENST00000378122 LINC00208Q96KT6 92 aa8.54□□□□□ -1.04
PCDHA9-201ENST00000378122 FHL2Q14192 279 aa8.54□□□□□ -1.04
PCDHA9-201ENST00000378122 SPACA4Q8TDM5 124 aa8.54□□□□□ -1.04
PCDHA9-201ENST00000378122 NCOR2Q9Y618 2525 aa8.53□□□□□ -1.04
PCDHA9-201ENST00000378122 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
PCDHA9-201ENST00000378122 PIEZO2Q9H5I5 2752 aa8.53□□□□□ -1.04
PCDHA9-201ENST00000378122 WWC2-AS2Q96NR7 200 aa8.53□□□□□ -1.04
PCDHA9-201ENST00000378122 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
PCDHA9-201ENST00000378122 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
PCDHA9-201ENST00000378122 LINC00846Q9NV44 126 aa8.52□□□□□ -1.05
PCDHA9-201ENST00000378122 C10orf142B7Z368 130 aa8.51□□□□□ -1.05
PCDHA9-201ENST00000378122 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
PCDHA9-201ENST00000378122 LINC00575Q6W349 94 aa8.51□□□□□ -1.05
PCDHA9-201ENST00000378122 TRBV7-7A0A0K0K1E9 115 aa8.5□□□□□ -1.05
PCDHA9-201ENST00000378122 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
PCDHA9-201ENST00000378122 FHL3Q13643 280 aa8.5□□□□□ -1.05
PCDHA9-201ENST00000378122 UTRNP46939 3433 aa8.5□□□□□ -1.05
PCDHA9-201ENST00000378122 A8MTW9 85 aa8.49□□□□□ -1.05
PCDHA9-201ENST00000378122 TRBV7-6A0A0J9YX20 115 aa8.49□□□□□ -1.05
PCDHA9-201ENST00000378122 EGFEM1PQ0D2K5 195 aa8.49□□□□□ -1.05
PCDHA9-201ENST00000378122 CACNA1AO00555 2505 aa8.49□□□□□ -1.05
PCDHA9-201ENST00000378122 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
PCDHA9-201ENST00000378122 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
PCDHA9-201ENST00000378122 C2orf48Q96LS8 159 aa8.48□□□□□ -1.05
PCDHA9-201ENST00000378122 MYO18BQ8IUG5 2567 aa8.48□□□□□ -1.05
PCDHA9-201ENST00000378122 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
PCDHA9-201ENST00000378122 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
PCDHA9-201ENST00000378122 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
PCDHA9-201ENST00000378122 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.05
PCDHA9-201ENST00000378122 PRLHP81277 87 aa8.46□□□□□ -1.06
PCDHA9-201ENST00000378122 H0Y9P7 68 aa8.46□□□□□ -1.06
PCDHA9-201ENST00000378122 TMEM254Q8TBM7 123 aa8.45□□□□□ -1.06
PCDHA9-201ENST00000378122 WDR87Q6ZQQ6 2873 aa8.45□□□□□ -1.06
PCDHA9-201ENST00000378122 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
PCDHA9-201ENST00000378122 C16orf95Q9H693 158 aa8.45□□□□□ -1.06
PCDHA9-201ENST00000378122 IGF2RP11717 2491 aa8.44□□□□□ -1.06
PCDHA9-201ENST00000378122 A0A1W2PPR1 153 aa8.44□□□□□ -1.06
PCDHA9-201ENST00000378122 Q9BRP9 147 aa8.44□□□□□ -1.06
PCDHA9-201ENST00000378122 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
PCDHA9-201ENST00000378122 CRYGAP11844 174 aa8.43□□□□□ -1.06
PCDHA9-201ENST00000378122 C4orf26Q17RF5 130 aa8.43□□□□□ -1.06
PCDHA9-201ENST00000378122 C2CD3Q4AC94 2353 aa8.43□□□□□ -1.06
PCDHA9-201ENST00000378122 ZFYVE26Q68DK2 2539 aa8.42□□□□□ -1.06
PCDHA9-201ENST00000378122 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
PCDHA9-201ENST00000378122 CXCL6P80162 114 aa8.41□□□□□ -1.06
PCDHA9-201ENST00000378122 PRO0461Q9UI25 63 aa8.41□□□□□ -1.06
PCDHA9-201ENST00000378122 KIF25-AS1Q9Y6Z4 181 aa8.41□□□□□ -1.06
PCDHA9-201ENST00000378122 Q9UF83 564 aa8.4□□□□□ -1.06
PCDHA9-201ENST00000378122 SMIM29Q86T20 159 aa8.4□□□□□ -1.07
PCDHA9-201ENST00000378122 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
PCDHA9-201ENST00000378122 NAV2Q8IVL1 2488 aa8.39□□□□□ -1.07
PCDHA9-201ENST00000378122 A0A087WSZ3 146 aa8.39□□□□□ -1.07
PCDHA9-201ENST00000378122 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
PCDHA9-201ENST00000378122 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
PCDHA9-201ENST00000378122 Q6ZRU5 148 aa8.39□□□□□ -1.07
PCDHA9-201ENST00000378122 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
PCDHA9-201ENST00000378122 PIEZO1Q92508 2521 aa8.38□□□□□ -1.07
PCDHA9-201ENST00000378122 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
PCDHA9-201ENST00000378122 PRO0628Q9UI54 55 aa8.38□□□□□ -1.07
PCDHA9-201ENST00000378122 Q8N2B8 174 aa8.38□□□□□ -1.07
PCDHA9-201ENST00000378122 FAM218AQ96MZ4 157 aa8.38□□□□□ -1.07
PCDHA9-201ENST00000378122 EP400Q96L91 3159 aa8.37□□□□□ -1.07
PCDHA9-201ENST00000378122 CENPFP49454 3210 aa8.37□□□□□ -1.07
PCDHA9-201ENST00000378122 JMJD1CQ15652 2540 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms