RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 ACANP16112 2415 aa12.72□□□□□ -0.37
CNTNAP3-204ENST00000377656 NUPR2A6NF83 97 aa12.72□□□□□ -0.37
CNTNAP3-204ENST00000377656 HRCT1Q6UXD1 115 aa12.71□□□□□ -0.37
CNTNAP3-204ENST00000377656 BRK1Q8WUW1 75 aa12.71□□□□□ -0.37
CNTNAP3-204ENST00000377656 IGLV9-49A0A0B4J1Y8 123 aa12.71□□□□□ -0.37
CNTNAP3-204ENST00000377656 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
CNTNAP3-204ENST00000377656 M0QXV9 152 aa12.7□□□□□ -0.38
CNTNAP3-204ENST00000377656 TSPEAR-AS2P59090 65 aa12.7□□□□□ -0.38
CNTNAP3-204ENST00000377656 RPL28P46779 137 aaKnown RBP12.7□□□□□ -0.38
CNTNAP3-204ENST00000377656 C6orf223Q8N319 242 aa12.69□□□□□ -0.38
CNTNAP3-204ENST00000377656 AGRNO00468 2067 aa12.69□□□□□ -0.38
CNTNAP3-204ENST00000377656 MPLKIPQ8TAP9 179 aa12.69□□□□□ -0.38
CNTNAP3-204ENST00000377656 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
CNTNAP3-204ENST00000377656 NDUFC1O43677 76 aa12.68□□□□□ -0.38
CNTNAP3-204ENST00000377656 Q6ZSN1 163 aa12.67□□□□□ -0.38
CNTNAP3-204ENST00000377656 A0A1B0GUV1 79 aa12.67□□□□□ -0.38
CNTNAP3-204ENST00000377656 XGP55808 180 aa12.67□□□□□ -0.38
CNTNAP3-204ENST00000377656 EPG5Q9HCE0 2579 aa12.66□□□□□ -0.38
CNTNAP3-204ENST00000377656 Q8N814 137 aa12.66□□□□□ -0.38
CNTNAP3-204ENST00000377656 CEP350Q5VT06 3117 aa12.66□□□□□ -0.38
CNTNAP3-204ENST00000377656 PRR3P79522 188 aaKnown RBP12.66□□□□□ -0.38
CNTNAP3-204ENST00000377656 ADAMTSL4-AS1Q5T5F5 129 aa12.66□□□□□ -0.38
CNTNAP3-204ENST00000377656 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
CNTNAP3-204ENST00000377656 Q6JHZ5 121 aa12.64□□□□□ -0.39
CNTNAP3-204ENST00000377656 SPTSSBQ8NFR3 76 aa12.64□□□□□ -0.39
CNTNAP3-204ENST00000377656 SNURFQ9Y675 71 aa12.64□□□□□ -0.39
CNTNAP3-204ENST00000377656 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
CNTNAP3-204ENST00000377656 FAM240AA0A1B0GVK7 77 aa12.63□□□□□ -0.39
CNTNAP3-204ENST00000377656 Q8N9L7 120 aa12.63□□□□□ -0.39
CNTNAP3-204ENST00000377656 TET2Q6N021 2002 aaPredicted RBP12.63□□□□□ -0.39
CNTNAP3-204ENST00000377656 F8P00451 2351 aa12.62□□□□□ -0.39
CNTNAP3-204ENST00000377656 NDUFC2-KCTD14E9PQ53 114 aa12.62□□□□□ -0.39
CNTNAP3-204ENST00000377656 C1orf137Q5JT78 98 aa12.62□□□□□ -0.39
CNTNAP3-204ENST00000377656 COX7CP15954 63 aa12.62□□□□□ -0.39
CNTNAP3-204ENST00000377656 ATP5EP56381 51 aaPredicted RBP12.62□□□□□ -0.39
CNTNAP3-204ENST00000377656 SVIPQ8NHG7 77 aa12.61□□□□□ -0.39
CNTNAP3-204ENST00000377656 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
CNTNAP3-204ENST00000377656 MUC4Q99102 2169 aa12.61□□□□□ -0.39
CNTNAP3-204ENST00000377656 LYPD5Q6UWN5 251 aa12.61□□□□□ -0.39
CNTNAP3-204ENST00000377656 COL4A2P08572 1712 aa12.59□□□□□ -0.39
CNTNAP3-204ENST00000377656 ADAMTS20P59510 1910 aa12.58□□□□□ -0.39
CNTNAP3-204ENST00000377656 PRR4Q16378 134 aa12.58□□□□□ -0.4
CNTNAP3-204ENST00000377656 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
CNTNAP3-204ENST00000377656 F8WDY8 70 aa12.58□□□□□ -0.4
CNTNAP3-204ENST00000377656 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
CNTNAP3-204ENST00000377656 A0A087WYN8 130 aa12.58□□□□□ -0.4
CNTNAP3-204ENST00000377656 MRPL55Q7Z7F7 128 aaKnown RBP12.58□□□□□ -0.4
CNTNAP3-204ENST00000377656 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
CNTNAP3-204ENST00000377656 K7ERS5 55 aa12.57□□□□□ -0.4
CNTNAP3-204ENST00000377656 V9GYY9 64 aa12.57□□□□□ -0.4
CNTNAP3-204ENST00000377656 Q8N2B8 174 aa12.57□□□□□ -0.4
CNTNAP3-204ENST00000377656 UTRNP46939 3433 aa12.56□□□□□ -0.4
CNTNAP3-204ENST00000377656 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
CNTNAP3-204ENST00000377656 IGLV5-52A0A0A0MRZ9 124 aa12.55□□□□□ -0.4
CNTNAP3-204ENST00000377656 CELA1Q9UNI1 258 aa12.55□□□□□ -0.4
CNTNAP3-204ENST00000377656 PRR15LQ9BU68 103 aa12.54□□□□□ -0.4
CNTNAP3-204ENST00000377656 Q6Q795 121 aa12.54□□□□□ -0.4
CNTNAP3-204ENST00000377656 FAM30AQ9NZY2 134 aa12.54□□□□□ -0.4
CNTNAP3-204ENST00000377656 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
CNTNAP3-204ENST00000377656 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
CNTNAP3-204ENST00000377656 CCDC179H3BU77 68 aa12.52□□□□□ -0.4
CNTNAP3-204ENST00000377656 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.41
CNTNAP3-204ENST00000377656 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
CNTNAP3-204ENST00000377656 Q6ZRU5 148 aa12.49□□□□□ -0.41
CNTNAP3-204ENST00000377656 TRAV7A0A075B6U4 112 aa12.49□□□□□ -0.41
CNTNAP3-204ENST00000377656 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
CNTNAP3-204ENST00000377656 PRYO14603 147 aa12.49□□□□□ -0.41
CNTNAP3-204ENST00000377656 A0A087WVE0 104 aa12.48□□□□□ -0.41
CNTNAP3-204ENST00000377656 FHL3Q13643 280 aa12.48□□□□□ -0.41
CNTNAP3-204ENST00000377656 Q9BRP9 147 aa12.48□□□□□ -0.41
CNTNAP3-204ENST00000377656 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
CNTNAP3-204ENST00000377656 SERP1Q9Y6X1 66 aa12.47□□□□□ -0.41
CNTNAP3-204ENST00000377656 ESRGQ1W209 222 aa12.47□□□□□ -0.41
CNTNAP3-204ENST00000377656 LINC00208Q96KT6 92 aa12.47□□□□□ -0.41
CNTNAP3-204ENST00000377656 LINC00315P59091 139 aa12.46□□□□□ -0.42
CNTNAP3-204ENST00000377656 LINC00337Q8N6G1 96 aa12.46□□□□□ -0.42
CNTNAP3-204ENST00000377656 LINC00575Q6W349 94 aa12.46□□□□□ -0.42
CNTNAP3-204ENST00000377656 A0A087WSZ3 146 aa12.45□□□□□ -0.42
CNTNAP3-204ENST00000377656 IGHV3OR16-9A0A0B4J2B5 98 aa12.45□□□□□ -0.42
CNTNAP3-204ENST00000377656 IGLV5-39A0A0G2JS06 123 aa12.45□□□□□ -0.42
CNTNAP3-204ENST00000377656 Q8N3U1 123 aa12.45□□□□□ -0.42
CNTNAP3-204ENST00000377656 PCNTO95613 3336 aa12.44□□□□□ -0.42
CNTNAP3-204ENST00000377656 NHLRC4P0CG21 123 aaPredicted RBP12.44□□□□□ -0.42
CNTNAP3-204ENST00000377656 A8MTW9 85 aa12.44□□□□□ -0.42
CNTNAP3-204ENST00000377656 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
CNTNAP3-204ENST00000377656 A6NED7 52 aa12.43□□□□□ -0.42
CNTNAP3-204ENST00000377656 LINC01547P58512 204 aaPredicted RBP12.43□□□□□ -0.42
CNTNAP3-204ENST00000377656 IGHV6-1A0A0B4J1U7 121 aa12.42□□□□□ -0.42
CNTNAP3-204ENST00000377656 A0A0U1RQV1 116 aa12.4□□□□□ -0.42
CNTNAP3-204ENST00000377656 Q6ZVQ6 151 aa12.39□□□□□ -0.43
CNTNAP3-204ENST00000377656 PRLHP81277 87 aa12.38□□□□□ -0.43
CNTNAP3-204ENST00000377656 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
CNTNAP3-204ENST00000377656 SMIM26A0A096LP01 95 aa12.37□□□□□ -0.43
CNTNAP3-204ENST00000377656 LINC00846Q9NV44 126 aa12.36□□□□□ -0.43
CNTNAP3-204ENST00000377656 USP24Q9UPU5 2620 aa12.35□□□□□ -0.43
CNTNAP3-204ENST00000377656 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
CNTNAP3-204ENST00000377656 DEFB116Q30KQ4 102 aa12.32□□□□□ -0.44
CNTNAP3-204ENST00000377656 X6R8D5 127 aa12.32□□□□□ -0.44
CNTNAP3-204ENST00000377656 FSHBP01225 129 aa12.31□□□□□ -0.44
CNTNAP3-204ENST00000377656 IGLV5-45A0A087WSX0 123 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms