RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 A0A087WTM6 91 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 IFITM10A6NMD0 228 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 K7EMI3 77 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 ESDP10768 282 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 XCL1P47992 114 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 RPL39P62891 51 aaKnown RBP3.71□□□□□ -1.82
SSX1-201ENST00000376919 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 RNASE13Q5GAN3 156 aaKnown RBP3.71□□□□□ -1.82
SSX1-201ENST00000376919 ZC2HC1BQ5TFG8 222 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 ENHOQ6UWT2 76 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 Q6ZUT4 128 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 ZNF664Q8N3J9 261 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 C20orf203Q8NBC4 194 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 C2orf88Q9BSF0 95 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 SPANXA1Q9NS26 97 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 UBE2D4Q9Y2X8 147 aa3.71□□□□□ -1.82
SSX1-201ENST00000376919 EPPK1P58107 5090 aaKnown RBP3.7□□□□□ -1.82
SSX1-201ENST00000376919 TRAV13-1A0A0B4J241 112 aa3.7□□□□□ -1.82
SSX1-201ENST00000376919 M0QXV9 152 aa3.7□□□□□ -1.82
SSX1-201ENST00000376919 RAB5BP61020 215 aa3.7□□□□□ -1.82
SSX1-201ENST00000376919 COA6Q5JTJ3 125 aaKnown RBP3.7□□□□□ -1.82
SSX1-201ENST00000376919 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
SSX1-201ENST00000376919 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
SSX1-201ENST00000376919 MRPL52Q86TS9 123 aaKnown RBP3.7□□□□□ -1.82
SSX1-201ENST00000376919 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
SSX1-201ENST00000376919 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
SSX1-201ENST00000376919 CCL25O15444 150 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 CHTF8P0CG12 524 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 BAGE3Q86Y29 109 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 Q8N814 137 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 C7orf33Q8WU49 177 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 SCGB3A1Q96QR1 104 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 TIMM21Q9BVV7 248 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
SSX1-201ENST00000376919 FAT2Q9NYQ8 4349 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 LINC00959A0A1B0GUT2 108 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 LINC01549A6NIU2 74 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 C1orf196B1AJZ1 125 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 SCO1O75880 301 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 APOMO95445 188 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 TRGC2P03986 189 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 S100A1P23297 94 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 FUSP35637 526 aaKnown RBP eCLIP3.68□□□□□ -1.82
SSX1-201ENST00000376919 NDUFA6P56556 154 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
SSX1-201ENST00000376919 C18orf32Q8TCD1 76 aa3.68□□□□□ -1.82
SSX1-201ENST00000376919 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.67□□□□□ -1.82
SSX1-201ENST00000376919 A0A0J9YXY3 114 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 LRCOL1A6NCL2 159 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 COX7A2LO14548 114 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 HBDP02042 147 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 LINC00614P0C842 121 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 MRPS36P82909 103 aaKnown RBP3.67□□□□□ -1.82
SSX1-201ENST00000376919 WFDC2Q14508 124 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 Q1RN00 199 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 LINC00173Q6ZV60 143 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 FAM19A1Q7Z5A9 133 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 TOMM6Q96B49 74 aa3.67□□□□□ -1.82
SSX1-201ENST00000376919 PACRGQ96M98 296 aaPredicted RBP3.67□□□□□ -1.82
SSX1-201ENST00000376919 IGHV3OR16-9A0A0B4J2B5 98 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
SSX1-201ENST00000376919 SEC11AP67812 179 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 PMCHL1Q16048 86 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 C5orf38Q86SI9 138 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 CHCHD1Q96BP2 118 aaKnown RBP3.66□□□□□ -1.82
SSX1-201ENST00000376919 YPEL4Q96NS1 127 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 TIMM17AQ99595 171 aa3.66□□□□□ -1.82
SSX1-201ENST00000376919 FAM240AA0A1B0GVK7 77 aa3.65□□□□□ -1.83
SSX1-201ENST00000376919 KRTAP4-16G5E9R7 235 aaPredicted RBP3.65□□□□□ -1.83
SSX1-201ENST00000376919 SPAG11BQ08648 103 aa3.65□□□□□ -1.83
SSX1-201ENST00000376919 ORAOV1Q8WV07 137 aa3.65□□□□□ -1.83
SSX1-201ENST00000376919 PKIGQ9Y2B9 76 aa3.65□□□□□ -1.83
SSX1-201ENST00000376919 DNAH11Q96DT5 4516 aa3.65□□□□□ -1.83
SSX1-201ENST00000376919 PKD1P98161 4303 aa3.65□□□□□ -1.83
SSX1-201ENST00000376919 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 HECTD4Q9Y4D8 3996 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 COLCA2A8K830 154 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 UBE2D1P51668 147 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 HERVK_113P63121 156 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 PMVKQ15126 192 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 DPH3Q96FX2 82 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 CAMK2N2Q96S95 79 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 TOMM7Q9P0U1 55 aa3.64□□□□□ -1.83
SSX1-201ENST00000376919 BIRC6Q9NR09 4857 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 IGHV3-64A0A075B6Q5 118 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 A0A087WYN8 130 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
SSX1-201ENST00000376919 LINC01546A6NGU7 62 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 IGIPA6NJ69 53 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 H3BRM9 83 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 LEPROTL1O95214 131 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 CD164Q04900 197 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 KRTAP26-1Q6PEX3 210 aa3.63□□□□□ -1.83
SSX1-201ENST00000376919 Q6ZVH6 145 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms