RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 MYMXA0A1B0GTQ4 84 aa14.98□□□□□ -0.01
HLA-C-202ENST00000376237 ZNF625Q96I27 306 aaPredicted RBP14.98□□□□□ -0.01
HLA-C-202ENST00000376237 HERV-K104P63124 156 aa14.97□□□□□ -0.01
HLA-C-202ENST00000376237 SYCNQ0VAF6 134 aa14.97□□□□□ -0.01
HLA-C-202ENST00000376237 C2orf82Q6UX34 121 aa14.97□□□□□ -0.01
HLA-C-202ENST00000376237 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.97□□□□□ -0.01
HLA-C-202ENST00000376237 CNBPP62633 177 aaKnown RBP14.97□□□□□ -0.01
HLA-C-202ENST00000376237 HYDINQ4G0P3 5121 aa14.97□□□□□ -0.01
HLA-C-202ENST00000376237 UNQ6190/PRO20217Q6UXQ8 127 aa14.96□□□□□ -0.02
HLA-C-202ENST00000376237 C12orf57Q99622 126 aa14.96□□□□□ -0.02
HLA-C-202ENST00000376237 DNAH2Q9P225 4427 aa14.95□□□□□ -0.02
HLA-C-202ENST00000376237 ZNF815PA8K554 130 aa14.95□□□□□ -0.02
HLA-C-202ENST00000376237 PCP2Q8IVA1 136 aa14.95□□□□□ -0.02
HLA-C-202ENST00000376237 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.94□□□□□ -0.02
HLA-C-202ENST00000376237 TRBV30A0A0K0K1B3 111 aa14.94□□□□□ -0.02
HLA-C-202ENST00000376237 SLPIP03973 132 aa14.94□□□□□ -0.02
HLA-C-202ENST00000376237 COX8AP10176 69 aa14.94□□□□□ -0.02
HLA-C-202ENST00000376237 Q6ZRU5 148 aa14.94□□□□□ -0.02
HLA-C-202ENST00000376237 CARD19Q96LW7 228 aa14.94□□□□□ -0.02
HLA-C-202ENST00000376237 DNAH10Q8IVF4 4471 aa14.94□□□□□ -0.02
HLA-C-202ENST00000376237 LINC00518Q8N0U6 118 aa14.93□□□□□ -0.02
HLA-C-202ENST00000376237 TTTY13Q9BZ97 58 aa14.93□□□□□ -0.02
HLA-C-202ENST00000376237 RNF151Q2KHN1 245 aa14.92□□□□□ -0.02
HLA-C-202ENST00000376237 C10orf25Q5T742 122 aa14.92□□□□□ -0.02
HLA-C-202ENST00000376237 LINC00587B1AMM8 73 aa14.92□□□□□ -0.02
HLA-C-202ENST00000376237 DLEU1O43261 78 aa14.92□□□□□ -0.02
HLA-C-202ENST00000376237 BOD1L2Q8IYS8 172 aa14.92□□□□□ -0.02
HLA-C-202ENST00000376237 C14orf144Q96I85 54 aa14.91□□□□□ -0.02
HLA-C-202ENST00000376237 C6orf48Q9UBA6 75 aa14.9□□□□□ -0.02
HLA-C-202ENST00000376237 SLC25A34Q6PIV7 304 aa14.89□□□□□ -0.03
HLA-C-202ENST00000376237 COX17Q14061 63 aa14.88□□□□□ -0.03
HLA-C-202ENST00000376237 A0A0J9YXY3 114 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 SCGB1D4Q6XE38 83 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 ERG28Q9UKR5 140 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 RYR2Q92736 4967 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 CIRBPQ14011 172 aaKnown RBP14.87□□□□□ -0.03
HLA-C-202ENST00000376237 MEIG1Q5JSS6 88 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 C9orf163Q8N9P6 203 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 PGPEP1Q9NXJ5 209 aa14.87□□□□□ -0.03
HLA-C-202ENST00000376237 PKIGQ9Y2B9 76 aa14.85□□□□□ -0.03
HLA-C-202ENST00000376237 DNAH17Q9UFH2 4485 aa14.85□□□□□ -0.03
HLA-C-202ENST00000376237 IGLV5-52A0A0A0MRZ9 124 aa14.84□□□□□ -0.03
HLA-C-202ENST00000376237 TIMM17BO60830 172 aa14.84□□□□□ -0.03
HLA-C-202ENST00000376237 C9orf116Q5BN46 136 aaPredicted RBP14.84□□□□□ -0.03
HLA-C-202ENST00000376237 TLX1NBP0CAT3 122 aa14.83□□□□□ -0.04
HLA-C-202ENST00000376237 UQCR10Q9UDW1 63 aa14.83□□□□□ -0.04
HLA-C-202ENST00000376237 NDUFC2-KCTD14E9PQ53 114 aa14.82□□□□□ -0.04
HLA-C-202ENST00000376237 PFN2P35080 140 aa14.82□□□□□ -0.04
HLA-C-202ENST00000376237 SMIM13P0DJ93 91 aa14.81□□□□□ -0.04
HLA-C-202ENST00000376237 LINC00158P58513 81 aa14.81□□□□□ -0.04
HLA-C-202ENST00000376237 LOC107984640A0A0U1RRK4 108 aa14.8□□□□□ -0.04
HLA-C-202ENST00000376237 FRAS1Q86XX4 4008 aa14.79□□□□□ -0.04
HLA-C-202ENST00000376237 TMEM238C9JI98 176 aa14.79□□□□□ -0.04
HLA-C-202ENST00000376237 TSTD3H0UI37 97 aa14.79□□□□□ -0.04
HLA-C-202ENST00000376237 KRTAP10-2P60368 255 aa14.79□□□□□ -0.04
HLA-C-202ENST00000376237 PRO1933Q9H354 126 aa14.78□□□□□ -0.04
HLA-C-202ENST00000376237 A0A0U1RRA0 63 aa14.77□□□□□ -0.04
HLA-C-202ENST00000376237 LITAFQ99732 161 aa14.77□□□□□ -0.04
HLA-C-202ENST00000376237 MIEN1Q9BRT3 115 aa14.77□□□□□ -0.04
HLA-C-202ENST00000376237 HIGD1BQ9P298 99 aa14.77□□□□□ -0.04
HLA-C-202ENST00000376237 TP73-AS1Q9UF72 201 aa14.77□□□□□ -0.04
HLA-C-202ENST00000376237 A0A1B0GVY2 172 aa14.76□□□□□ -0.05
HLA-C-202ENST00000376237 SDIM1Q6ZPB5 146 aa14.76□□□□□ -0.05
HLA-C-202ENST00000376237 Q6ZVH6 145 aa14.76□□□□□ -0.05
HLA-C-202ENST00000376237 RPL18AQ02543 176 aaKnown RBP14.75□□□□□ -0.05
HLA-C-202ENST00000376237 ADAMTSL4-AS1Q5T5F5 129 aa14.75□□□□□ -0.05
HLA-C-202ENST00000376237 Q6ZRP5 223 aa14.75□□□□□ -0.05
HLA-C-202ENST00000376237 MIR7-3HGQ8N6C7 128 aa14.75□□□□□ -0.05
HLA-C-202ENST00000376237 SPANXB1Q9NS25 103 aaPredicted RBP14.75□□□□□ -0.05
HLA-C-202ENST00000376237 FUSP35637 526 aaKnown RBP eCLIP14.74□□□□□ -0.05
HLA-C-202ENST00000376237 C2orf91Q6ZV80 131 aa14.74□□□□□ -0.05
HLA-C-202ENST00000376237 SPANXDQ9BXN6 97 aa14.74□□□□□ -0.05
HLA-C-202ENST00000376237 SPANXCQ9NY87 97 aa14.74□□□□□ -0.05
HLA-C-202ENST00000376237 GCSHP23434 173 aa14.73□□□□□ -0.05
HLA-C-202ENST00000376237 FAT2Q9NYQ8 4349 aa14.72□□□□□ -0.05
HLA-C-202ENST00000376237 C16orf90A8MZG2 172 aa14.72□□□□□ -0.05
HLA-C-202ENST00000376237 LINC01620Q4KN68 170 aa14.72□□□□□ -0.05
HLA-C-202ENST00000376237 SRSF9Q13242 221 aaKnown RBP eCLIP14.71□□□□□ -0.05
HLA-C-202ENST00000376237 GAGE2EQ4V326 116 aa14.71□□□□□ -0.05
HLA-C-202ENST00000376237 GAGE2DQ9UEU5 116 aa14.71□□□□□ -0.05
HLA-C-202ENST00000376237 PTTG1IPP53801 180 aa14.71□□□□□ -0.06
HLA-C-202ENST00000376237 GAGE2BQ13066 116 aa14.71□□□□□ -0.06
HLA-C-202ENST00000376237 DAND5Q8N907 189 aa14.71□□□□□ -0.06
HLA-C-202ENST00000376237 COPS9Q8WXC6 57 aa14.71□□□□□ -0.06
HLA-C-202ENST00000376237 SND1-IT1Q9HBX3 110 aa14.71□□□□□ -0.06
HLA-C-202ENST00000376237 LINC00474Q9P2X8 69 aa14.71□□□□□ -0.06
HLA-C-202ENST00000376237 HNRNPA3P51991 378 aaKnown RBP14.7□□□□□ -0.06
HLA-C-202ENST00000376237 IFITM1P13164 125 aa14.69□□□□□ -0.06
HLA-C-202ENST00000376237 HIST1H4GQ99525 98 aa14.68□□□□□ -0.06
HLA-C-202ENST00000376237 A0A096LNI7 61 aa14.67□□□□□ -0.06
HLA-C-202ENST00000376237 LOC107984156A0A0G2JMH3 177 aa14.67□□□□□ -0.06
HLA-C-202ENST00000376237 ARL17AQ8IVW1 177 aa14.67□□□□□ -0.06
HLA-C-202ENST00000376237 PPDPFQ9H3Y8 114 aa14.67□□□□□ -0.06
HLA-C-202ENST00000376237 XAGE1AQ9HD64 81 aa14.67□□□□□ -0.06
HLA-C-202ENST00000376237 TAL2Q16559 108 aa14.66□□□□□ -0.06
HLA-C-202ENST00000376237 LINC00308Q8TCZ7 52 aa14.66□□□□□ -0.06
HLA-C-202ENST00000376237 IGKV2-24A0A0C4DH68 120 aa14.65□□□□□ -0.06
HLA-C-202ENST00000376237 C9orf129Q5T035 196 aaKnown RBP14.64□□□□□ -0.07
HLA-C-202ENST00000376237 NPC2P61916 151 aa14.62□□□□□ -0.07
HLA-C-202ENST00000376237 MUSTN1Q8IVN3 82 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 393.3 ms