RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 NTN5Q8WTR8 489 aaPredicted RBP13□□□□□ -0.33
PPP1R3F-202ENST00000376188 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
PPP1R3F-202ENST00000376188 CRPP02741 224 aa12.99□□□□□ -0.33
PPP1R3F-202ENST00000376188 LINC00269Q8N2A0 174 aa12.99□□□□□ -0.33
PPP1R3F-202ENST00000376188 CD164L2Q6UWJ8 174 aa12.98□□□□□ -0.33
PPP1R3F-202ENST00000376188 CDIP1Q9H305 208 aa12.98□□□□□ -0.33
PPP1R3F-202ENST00000376188 SCGB1A1P11684 91 aa12.98□□□□□ -0.33
PPP1R3F-202ENST00000376188 ANGP03950 147 aaKnown RBP12.97□□□□□ -0.33
PPP1R3F-202ENST00000376188 F8P00451 2351 aa12.97□□□□□ -0.33
PPP1R3F-202ENST00000376188 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
PPP1R3F-202ENST00000376188 CCL18P55774 89 aa12.96□□□□□ -0.33
PPP1R3F-202ENST00000376188 REG3AQ06141 175 aa12.96□□□□□ -0.33
PPP1R3F-202ENST00000376188 HTN3P15516 51 aa12.96□□□□□ -0.34
PPP1R3F-202ENST00000376188 PFN2P35080 140 aa12.96□□□□□ -0.34
PPP1R3F-202ENST00000376188 LELP1Q5T871 98 aa12.96□□□□□ -0.34
PPP1R3F-202ENST00000376188 TRRAPQ9Y4A5 3859 aa12.95□□□□□ -0.34
PPP1R3F-202ENST00000376188 CHCHD10Q8WYQ3 142 aaPredicted RBP12.95□□□□□ -0.34
PPP1R3F-202ENST00000376188 LINC00337Q8N6G1 96 aa12.94□□□□□ -0.34
PPP1R3F-202ENST00000376188 IGKV2-28A0A075B6P5 120 aa12.94□□□□□ -0.34
PPP1R3F-202ENST00000376188 IGKV2D-28P01615 120 aa12.94□□□□□ -0.34
PPP1R3F-202ENST00000376188 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
PPP1R3F-202ENST00000376188 C11orf68Q9H3H3 251 aaKnown RBP12.94□□□□□ -0.34
PPP1R3F-202ENST00000376188 TEX49A0A1B0GTD5 131 aa12.93□□□□□ -0.34
PPP1R3F-202ENST00000376188 CXCL5P42830 114 aa12.93□□□□□ -0.34
PPP1R3F-202ENST00000376188 TRACP01848 142 aa12.92□□□□□ -0.34
PPP1R3F-202ENST00000376188 CKS1BP61024 79 aa12.92□□□□□ -0.34
PPP1R3F-202ENST00000376188 OXLD1Q5BKU9 147 aa12.91□□□□□ -0.34
PPP1R3F-202ENST00000376188 Q8N3U1 123 aa12.91□□□□□ -0.34
PPP1R3F-202ENST00000376188 CFAP161Q6P656 301 aa12.91□□□□□ -0.34
PPP1R3F-202ENST00000376188 MALP21145 153 aa12.9□□□□□ -0.34
PPP1R3F-202ENST00000376188 IGLV10-54A0A075B6I4 117 aa12.9□□□□□ -0.34
PPP1R3F-202ENST00000376188 KIAA0087Q14695 138 aa12.89□□□□□ -0.35
PPP1R3F-202ENST00000376188 COX17Q14061 63 aa12.88□□□□□ -0.35
PPP1R3F-202ENST00000376188 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
PPP1R3F-202ENST00000376188 KRTAP24-1Q3LI83 254 aa12.88□□□□□ -0.35
PPP1R3F-202ENST00000376188 XGP55808 180 aa12.87□□□□□ -0.35
PPP1R3F-202ENST00000376188 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
PPP1R3F-202ENST00000376188 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
PPP1R3F-202ENST00000376188 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
PPP1R3F-202ENST00000376188 SMIM11BQ8TCY0 68 aa12.86□□□□□ -0.35
PPP1R3F-202ENST00000376188 PRR34Q9NV39 138 aa12.86□□□□□ -0.35
PPP1R3F-202ENST00000376188 H3BNG1 76 aa12.85□□□□□ -0.35
PPP1R3F-202ENST00000376188 FAM218AQ96MZ4 157 aa12.85□□□□□ -0.35
PPP1R3F-202ENST00000376188 MT-ATP8P03928 68 aa12.84□□□□□ -0.35
PPP1R3F-202ENST00000376188 LYPD5Q6UWN5 251 aa12.84□□□□□ -0.35
PPP1R3F-202ENST00000376188 C3orf56Q8N813 242 aa12.84□□□□□ -0.35
PPP1R3F-202ENST00000376188 H0YGX0 51 aa12.83□□□□□ -0.35
PPP1R3F-202ENST00000376188 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
PPP1R3F-202ENST00000376188 RETNQ9HD89 108 aa12.82□□□□□ -0.36
PPP1R3F-202ENST00000376188 KLK12Q9UKR0 248 aa12.82□□□□□ -0.36
PPP1R3F-202ENST00000376188 OR13C6PQ8NH95 151 aa12.81□□□□□ -0.36
PPP1R3F-202ENST00000376188 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
PPP1R3F-202ENST00000376188 NDUFC2O95298 119 aa12.81□□□□□ -0.36
PPP1R3F-202ENST00000376188 BAALC-AS2P0C853 105 aa12.8□□□□□ -0.36
PPP1R3F-202ENST00000376188 SPAG11BQ08648 103 aa12.79□□□□□ -0.36
PPP1R3F-202ENST00000376188 KPRPQ5T749 579 aaPredicted RBP12.79□□□□□ -0.36
PPP1R3F-202ENST00000376188 MUC7Q8TAX7 377 aa12.79□□□□□ -0.36
PPP1R3F-202ENST00000376188 DNAL4O96015 105 aa12.78□□□□□ -0.36
PPP1R3F-202ENST00000376188 ENHOQ6UWT2 76 aa12.78□□□□□ -0.36
PPP1R3F-202ENST00000376188 Q6ZTC4 211 aa12.77□□□□□ -0.37
PPP1R3F-202ENST00000376188 A0A087WYN8 130 aa12.76□□□□□ -0.37
PPP1R3F-202ENST00000376188 FLNBO75369 2602 aaKnown RBP12.75□□□□□ -0.37
PPP1R3F-202ENST00000376188 C9orf116Q5BN46 136 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3F-202ENST00000376188 Q9HAA7 133 aa12.75□□□□□ -0.37
PPP1R3F-202ENST00000376188 SNCGO76070 127 aa12.74□□□□□ -0.37
PPP1R3F-202ENST00000376188 A0A0J9YWU9 116 aa12.74□□□□□ -0.37
PPP1R3F-202ENST00000376188 UNQ6190/PRO20217Q6UXQ8 127 aa12.73□□□□□ -0.37
PPP1R3F-202ENST00000376188 TMEM126AQ9H061 195 aa12.73□□□□□ -0.37
PPP1R3F-202ENST00000376188 CYSRT1A8MQ03 144 aa12.72□□□□□ -0.37
PPP1R3F-202ENST00000376188 ACYP1P07311 99 aa12.72□□□□□ -0.37
PPP1R3F-202ENST00000376188 WFDC10BQ8IUB3 73 aa12.72□□□□□ -0.37
PPP1R3F-202ENST00000376188 C6orf223Q8N319 242 aa12.72□□□□□ -0.37
PPP1R3F-202ENST00000376188 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
PPP1R3F-202ENST00000376188 INAFM2P0DMQ5 153 aa12.71□□□□□ -0.37
PPP1R3F-202ENST00000376188 C10orf25Q5T742 122 aa12.71□□□□□ -0.37
PPP1R3F-202ENST00000376188 GVQW2A0A096LPI5 108 aaPredicted RBP12.71□□□□□ -0.38
PPP1R3F-202ENST00000376188 LECT2O14960 151 aa12.71□□□□□ -0.38
PPP1R3F-202ENST00000376188 STAB1Q9NY15 2570 aa12.71□□□□□ -0.38
PPP1R3F-202ENST00000376188 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
PPP1R3F-202ENST00000376188 PRR3P79522 188 aaKnown RBP12.7□□□□□ -0.38
PPP1R3F-202ENST00000376188 C15orf53Q8NAA6 179 aa12.7□□□□□ -0.38
PPP1R3F-202ENST00000376188 CMYA5Q8N3K9 4069 aa12.69□□□□□ -0.38
PPP1R3F-202ENST00000376188 A0A1B0GX51 115 aa12.68□□□□□ -0.38
PPP1R3F-202ENST00000376188 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
PPP1R3F-202ENST00000376188 LINC00526Q96FQ7 95 aa12.68□□□□□ -0.38
PPP1R3F-202ENST00000376188 A0A1B0GV72 72 aa12.68□□□□□ -0.38
PPP1R3F-202ENST00000376188 DEFB131BA0A096LNP1 70 aa12.67□□□□□ -0.38
PPP1R3F-202ENST00000376188 GAGE2BQ13066 116 aa12.66□□□□□ -0.38
PPP1R3F-202ENST00000376188 ESRGQ1W209 222 aa12.66□□□□□ -0.38
PPP1R3F-202ENST00000376188 GAGE2EQ4V326 116 aa12.66□□□□□ -0.38
PPP1R3F-202ENST00000376188 GAGE2DQ9UEU5 116 aa12.66□□□□□ -0.38
PPP1R3F-202ENST00000376188 Q6Q795 121 aa12.66□□□□□ -0.38
PPP1R3F-202ENST00000376188 NCR3O14931 201 aa12.65□□□□□ -0.38
PPP1R3F-202ENST00000376188 S100A7L2Q5SY68 101 aa12.65□□□□□ -0.38
PPP1R3F-202ENST00000376188 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
PPP1R3F-202ENST00000376188 Q8NDZ9 215 aa12.64□□□□□ -0.39
PPP1R3F-202ENST00000376188 ORMDL1Q9P0S3 153 aa12.64□□□□□ -0.39
PPP1R3F-202ENST00000376188 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
PPP1R3F-202ENST00000376188 ANK2Q01484 3957 aa12.64□□□□□ -0.39
PPP1R3F-202ENST00000376188 ZNF561-AS1K7EIQ3 104 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms