RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ZNF561-AS1K7EIQ3 104 aa7.73□□□□□ -1.17
LSM2-208ENST00000375661 KIAA0087Q14695 138 aa7.73□□□□□ -1.17
LSM2-208ENST00000375661 LINC00469Q8N7U9 141 aa7.73□□□□□ -1.17
LSM2-208ENST00000375661 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
LSM2-208ENST00000375661 HSPB8Q9UJY1 196 aa7.73□□□□□ -1.17
LSM2-208ENST00000375661 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
LSM2-208ENST00000375661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
LSM2-208ENST00000375661 C11orf86A6NJI1 115 aa7.72□□□□□ -1.17
LSM2-208ENST00000375661 ZNF22P17026 224 aaPredicted RBP7.72□□□□□ -1.17
LSM2-208ENST00000375661 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
LSM2-208ENST00000375661 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
LSM2-208ENST00000375661 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
LSM2-208ENST00000375661 MRPL35Q9NZE8 188 aaKnown RBP7.72□□□□□ -1.17
LSM2-208ENST00000375661 ODF1Q14990 250 aa7.71□□□□□ -1.18
LSM2-208ENST00000375661 C2orf48Q96LS8 159 aa7.71□□□□□ -1.18
LSM2-208ENST00000375661 PACRGQ96M98 296 aaPredicted RBP7.71□□□□□ -1.18
LSM2-208ENST00000375661 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
LSM2-208ENST00000375661 F8VRH5 84 aa7.7□□□□□ -1.18
LSM2-208ENST00000375661 H0Y8G0 127 aa7.7□□□□□ -1.18
LSM2-208ENST00000375661 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
LSM2-208ENST00000375661 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.69□□□□□ -1.18
LSM2-208ENST00000375661 PANO1I0J062 215 aa7.69□□□□□ -1.18
LSM2-208ENST00000375661 SPINK8P0C7L1 97 aa7.69□□□□□ -1.18
LSM2-208ENST00000375661 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
LSM2-208ENST00000375661 MAP1LC3CQ9BXW4 147 aa7.69□□□□□ -1.18
LSM2-208ENST00000375661 H3BRM9 83 aa7.68□□□□□ -1.18
LSM2-208ENST00000375661 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
LSM2-208ENST00000375661 Q8IZM0 81 aa7.68□□□□□ -1.18
LSM2-208ENST00000375661 HIST3H2BBQ8N257 126 aa7.68□□□□□ -1.18
LSM2-208ENST00000375661 CARD19Q96LW7 228 aa7.68□□□□□ -1.18
LSM2-208ENST00000375661 TOMM7Q9P0U1 55 aa7.68□□□□□ -1.18
LSM2-208ENST00000375661 IGLV5-39A0A0G2JS06 123 aa7.67□□□□□ -1.18
LSM2-208ENST00000375661 SYS1-DBNDD2H3BUS1 97 aa7.67□□□□□ -1.18
LSM2-208ENST00000375661 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
LSM2-208ENST00000375661 C2orf82Q6UX34 121 aa7.67□□□□□ -1.18
LSM2-208ENST00000375661 UNQ6190/PRO20217Q6UXQ8 127 aa7.67□□□□□ -1.18
LSM2-208ENST00000375661 PMCHL2Q9BQD1 86 aa7.67□□□□□ -1.18
LSM2-208ENST00000375661 F8WDY8 70 aa7.66□□□□□ -1.18
LSM2-208ENST00000375661 NDUFA1O15239 70 aa7.66□□□□□ -1.18
LSM2-208ENST00000375661 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
LSM2-208ENST00000375661 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
LSM2-208ENST00000375661 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
LSM2-208ENST00000375661 A0A087WYN8 130 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 TMEM223A0PJW6 202 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 S100A6P06703 90 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 PRSS2P07478 247 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 SNRPEP62304 92 aaKnown RBP7.65□□□□□ -1.18
LSM2-208ENST00000375661 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 PET117Q6UWS5 81 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 COX7B2Q8TF08 81 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 LINC01600Q96MT4 127 aa7.65□□□□□ -1.18
LSM2-208ENST00000375661 C5orf52A6NGY3 159 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 DPM2O94777 84 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 SPACA4Q8TDM5 124 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 C7orf33Q8WU49 177 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 DPH3Q96FX2 82 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 HIST1H2BLQ99880 126 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 PLAC8Q9NZF1 115 aa7.64□□□□□ -1.19
LSM2-208ENST00000375661 TNXBP22105 4242 aa7.63□□□□□ -1.19
LSM2-208ENST00000375661 LRP2P98164 4655 aa7.63□□□□□ -1.19
LSM2-208ENST00000375661 IGKCP01834 107 aa7.63□□□□□ -1.19
LSM2-208ENST00000375661 PLNP26678 52 aa7.63□□□□□ -1.19
LSM2-208ENST00000375661 KRTDAPP60985 99 aa7.63□□□□□ -1.19
LSM2-208ENST00000375661 CKS1BP61024 79 aa7.63□□□□□ -1.19
LSM2-208ENST00000375661 A0A096LNI7 61 aa7.62□□□□□ -1.19
LSM2-208ENST00000375661 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
LSM2-208ENST00000375661 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
LSM2-208ENST00000375661 S100A2P29034 98 aa7.62□□□□□ -1.19
LSM2-208ENST00000375661 C9orf116Q5BN46 136 aaPredicted RBP7.62□□□□□ -1.19
LSM2-208ENST00000375661 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
LSM2-208ENST00000375661 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
LSM2-208ENST00000375661 CXCL5P42830 114 aa7.61□□□□□ -1.19
LSM2-208ENST00000375661 IGKV2-24A0A0C4DH68 120 aa7.6□□□□□ -1.19
LSM2-208ENST00000375661 GAGE2BQ13066 116 aa7.6□□□□□ -1.19
LSM2-208ENST00000375661 PTTG1IPP53801 180 aa7.59□□□□□ -1.19
LSM2-208ENST00000375661 Q6ZRP5 223 aa7.59□□□□□ -1.19
LSM2-208ENST00000375661 TSPEAR-AS2P59090 65 aa7.58□□□□□ -1.2
LSM2-208ENST00000375661 PRR3P79522 188 aaKnown RBP7.58□□□□□ -1.2
LSM2-208ENST00000375661 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
LSM2-208ENST00000375661 ZNF625Q96I27 306 aaPredicted RBP7.58□□□□□ -1.2
LSM2-208ENST00000375661 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
LSM2-208ENST00000375661 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
LSM2-208ENST00000375661 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
LSM2-208ENST00000375661 LEPROTO15243 131 aa7.57□□□□□ -1.2
LSM2-208ENST00000375661 MAJINQ3KP22 176 aa7.57□□□□□ -1.2
LSM2-208ENST00000375661 REG3GQ6UW15 175 aa7.57□□□□□ -1.2
LSM2-208ENST00000375661 STPG4Q8N801 248 aa7.57□□□□□ -1.2
LSM2-208ENST00000375661 C20orf202A1L168 122 aa7.56□□□□□ -1.2
LSM2-208ENST00000375661 E9PLD3 99 aa7.56□□□□□ -1.2
LSM2-208ENST00000375661 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
LSM2-208ENST00000375661 HERVK_113P61574 105 aa7.56□□□□□ -1.2
LSM2-208ENST00000375661 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
LSM2-208ENST00000375661 LINC00474Q9P2X8 69 aa7.56□□□□□ -1.2
LSM2-208ENST00000375661 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
LSM2-208ENST00000375661 A0A1W2PNN7 141 aa7.55□□□□□ -1.2
LSM2-208ENST00000375661 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
LSM2-208ENST00000375661 PLEKHB2Q96CS7 222 aa7.55□□□□□ -1.2
LSM2-208ENST00000375661 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
LSM2-208ENST00000375661 J3QQQ9 107 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms