RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 RPL18AQ02543 176 aaKnown RBP10.03□□□□□ -0.8
C11orf88-202ENST00000375618 C9orf116Q5BN46 136 aaPredicted RBP10.03□□□□□ -0.8
C11orf88-202ENST00000375618 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
C11orf88-202ENST00000375618 SERF1AO75920 110 aa10.02□□□□□ -0.81
C11orf88-202ENST00000375618 ATP5LO75964 103 aa10.02□□□□□ -0.81
C11orf88-202ENST00000375618 SPINK8P0C7L1 97 aa10.02□□□□□ -0.81
C11orf88-202ENST00000375618 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
C11orf88-202ENST00000375618 RPL37AP61513 92 aaKnown RBP10.02□□□□□ -0.81
C11orf88-202ENST00000375618 Q6ZRP5 223 aa10.02□□□□□ -0.81
C11orf88-202ENST00000375618 BAGE3Q86Y29 109 aa10.02□□□□□ -0.81
C11orf88-202ENST00000375618 Q8IZM0 81 aa10.02□□□□□ -0.81
C11orf88-202ENST00000375618 ZNF22P17026 224 aaPredicted RBP10.01□□□□□ -0.81
C11orf88-202ENST00000375618 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
C11orf88-202ENST00000375618 LINC00474Q9P2X8 69 aa10.01□□□□□ -0.81
C11orf88-202ENST00000375618 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
C11orf88-202ENST00000375618 C11orf86A6NJI1 115 aa10□□□□□ -0.81
C11orf88-202ENST00000375618 PRSS2P07478 247 aa10□□□□□ -0.81
C11orf88-202ENST00000375618 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
C11orf88-202ENST00000375618 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
C11orf88-202ENST00000375618 HSBP1O75506 76 aa9.99□□□□□ -0.81
C11orf88-202ENST00000375618 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
C11orf88-202ENST00000375618 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
C11orf88-202ENST00000375618 FAM168BA1KXE4 195 aa9.98□□□□□ -0.81
C11orf88-202ENST00000375618 KRTAP7-1Q8IUC3 87 aa9.98□□□□□ -0.81
C11orf88-202ENST00000375618 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
C11orf88-202ENST00000375618 FLG2Q5D862 2391 aaPredicted RBP9.98□□□□□ -0.81
C11orf88-202ENST00000375618 CKS1BP61024 79 aa9.97□□□□□ -0.81
C11orf88-202ENST00000375618 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
C11orf88-202ENST00000375618 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
C11orf88-202ENST00000375618 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
C11orf88-202ENST00000375618 PKHD1L1Q86WI1 4243 aa9.96□□□□□ -0.81
C11orf88-202ENST00000375618 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.82
C11orf88-202ENST00000375618 NDUFC2-KCTD14E9PQ53 114 aa9.95□□□□□ -0.82
C11orf88-202ENST00000375618 F8VRH5 84 aa9.95□□□□□ -0.82
C11orf88-202ENST00000375618 C9orf129Q5T035 196 aaKnown RBP9.95□□□□□ -0.82
C11orf88-202ENST00000375618 CHTOPQ9Y3Y2 248 aaKnown RBP9.95□□□□□ -0.82
C11orf88-202ENST00000375618 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
C11orf88-202ENST00000375618 H3BRM9 83 aa9.93□□□□□ -0.82
C11orf88-202ENST00000375618 CXCL5P42830 114 aa9.93□□□□□ -0.82
C11orf88-202ENST00000375618 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
C11orf88-202ENST00000375618 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
C11orf88-202ENST00000375618 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
C11orf88-202ENST00000375618 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
C11orf88-202ENST00000375618 KRTAP11-1Q8IUC1 163 aa9.92□□□□□ -0.82
C11orf88-202ENST00000375618 LEPROTL1O95214 131 aa9.91□□□□□ -0.82
C11orf88-202ENST00000375618 ODF1Q14990 250 aa9.91□□□□□ -0.82
C11orf88-202ENST00000375618 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
C11orf88-202ENST00000375618 H0Y8G0 127 aa9.9□□□□□ -0.82
C11orf88-202ENST00000375618 FABP4P15090 132 aa9.9□□□□□ -0.82
C11orf88-202ENST00000375618 XAGE1AQ9HD64 81 aa9.9□□□□□ -0.82
C11orf88-202ENST00000375618 LRP1Q07954 4544 aaKnown RBP9.9□□□□□ -0.83
C11orf88-202ENST00000375618 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
C11orf88-202ENST00000375618 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
C11orf88-202ENST00000375618 FAT3Q8TDW7 4589 aa9.87□□□□□ -0.83
C11orf88-202ENST00000375618 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
C11orf88-202ENST00000375618 PMCHL2Q9BQD1 86 aa9.86□□□□□ -0.83
C11orf88-202ENST00000375618 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
C11orf88-202ENST00000375618 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
C11orf88-202ENST00000375618 M0QXV9 152 aa9.85□□□□□ -0.83
C11orf88-202ENST00000375618 ZNF625Q96I27 306 aaPredicted RBP9.85□□□□□ -0.83
C11orf88-202ENST00000375618 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
C11orf88-202ENST00000375618 S100A1P23297 94 aa9.83□□□□□ -0.84
C11orf88-202ENST00000375618 PFN2P35080 140 aa9.82□□□□□ -0.84
C11orf88-202ENST00000375618 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
C11orf88-202ENST00000375618 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
C11orf88-202ENST00000375618 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
C11orf88-202ENST00000375618 HERC1Q15751 4861 aa9.81□□□□□ -0.84
C11orf88-202ENST00000375618 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
C11orf88-202ENST00000375618 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
C11orf88-202ENST00000375618 DPM2O94777 84 aa9.79□□□□□ -0.84
C11orf88-202ENST00000375618 C1orf137Q5JT78 98 aa9.79□□□□□ -0.84
C11orf88-202ENST00000375618 Q8NDZ9 215 aa9.79□□□□□ -0.84
C11orf88-202ENST00000375618 MAP1LC3CQ9BXW4 147 aa9.79□□□□□ -0.84
C11orf88-202ENST00000375618 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
C11orf88-202ENST00000375618 SYS1-DBNDD2H3BUS1 97 aa9.78□□□□□ -0.84
C11orf88-202ENST00000375618 PLNP26678 52 aa9.78□□□□□ -0.84
C11orf88-202ENST00000375618 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
C11orf88-202ENST00000375618 J3QL48 77 aa9.77□□□□□ -0.85
C11orf88-202ENST00000375618 OXTP01178 125 aa9.77□□□□□ -0.85
C11orf88-202ENST00000375618 IGKCP01834 107 aa9.77□□□□□ -0.85
C11orf88-202ENST00000375618 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
C11orf88-202ENST00000375618 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
C11orf88-202ENST00000375618 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
C11orf88-202ENST00000375618 UBE2BP63146 152 aa9.76□□□□□ -0.85
C11orf88-202ENST00000375618 IGLV5-37A0A075B6J1 123 aa9.75□□□□□ -0.85
C11orf88-202ENST00000375618 LEPROTO15243 131 aa9.75□□□□□ -0.85
C11orf88-202ENST00000375618 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
C11orf88-202ENST00000375618 COX17Q14061 63 aa9.75□□□□□ -0.85
C11orf88-202ENST00000375618 SPINK6Q6UWN8 80 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms