RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 IGLV5-39A0A0G2JS06 123 aa6.18□□□□□ -1.42
UBR4-201ENST00000375218 MIAQ16674 131 aa6.17□□□□□ -1.42
UBR4-201ENST00000375218 RPL39P5Q59GN2 51 aa6.17□□□□□ -1.42
UBR4-201ENST00000375218 Q6JHZ5 121 aa6.17□□□□□ -1.42
UBR4-201ENST00000375218 PRAC2D3DTV9 90 aa6.16□□□□□ -1.42
UBR4-201ENST00000375218 IGLV1-40P01703 118 aa6.16□□□□□ -1.42
UBR4-201ENST00000375218 SPG11Q96JI7 2443 aa6.16□□□□□ -1.42
UBR4-201ENST00000375218 IGKV1OR2-108A0A075B7D4 117 aa6.16□□□□□ -1.42
UBR4-201ENST00000375218 Q6YL49 198 aa6.16□□□□□ -1.42
UBR4-201ENST00000375218 TRBV7-3A0A075B6L6 115 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 CCL3L1P16619 93 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 MOBPQ13875 183 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 RNASE13Q5GAN3 156 aaKnown RBP6.15□□□□□ -1.42
UBR4-201ENST00000375218 Q5VV11 94 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.42
UBR4-201ENST00000375218 HIGD2BQ4VC39 106 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 ZNF575Q86XF7 245 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 TMEM14BQ9NUH8 114 aa6.15□□□□□ -1.42
UBR4-201ENST00000375218 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.43
UBR4-201ENST00000375218 SERF2P84101 59 aa6.15□□□□□ -1.43
UBR4-201ENST00000375218 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.43
UBR4-201ENST00000375218 IGLV8-61A0A075B6I0 122 aa6.15□□□□□ -1.43
UBR4-201ENST00000375218 IGHV3-21A0A0B4J1V1 117 aa6.15□□□□□ -1.43
UBR4-201ENST00000375218 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.43
UBR4-201ENST00000375218 NDUFA11Q86Y39 141 aa6.14□□□□□ -1.43
UBR4-201ENST00000375218 CTXND1A0A1B0GTU2 59 aa6.14□□□□□ -1.43
UBR4-201ENST00000375218 IGHV3-35A0A0C4DH35 117 aa6.14□□□□□ -1.43
UBR4-201ENST00000375218 TRBV10-3A0A0K0K1G6 114 aa6.14□□□□□ -1.43
UBR4-201ENST00000375218 CYSRT1A8MQ03 144 aa6.14□□□□□ -1.43
UBR4-201ENST00000375218 ERHP84090 104 aaKnown RBP6.14□□□□□ -1.43
UBR4-201ENST00000375218 HUWE1Q7Z6Z7 4374 aaKnown RBP6.13□□□□□ -1.43
UBR4-201ENST00000375218 Q6ZQT0 140 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
UBR4-201ENST00000375218 UBE2D1P51668 147 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 XAGE1AQ9HD64 81 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 APELAP0DMC3 54 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 LYPD1Q8N2G4 141 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 FAM104AQ969W3 186 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 CREBBPQ92793 2442 aa6.13□□□□□ -1.43
UBR4-201ENST00000375218 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 COX6CP09669 75 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 CYP4F30PQ9H0H9 118 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 A0A1B0GW54 56 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 IGLV1-47P01700 117 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 SAA2P0DJI9 122 aaPredicted RBP6.12□□□□□ -1.43
UBR4-201ENST00000375218 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 LECT2O14960 151 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 ICOSQ9Y6W8 199 aa6.12□□□□□ -1.43
UBR4-201ENST00000375218 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 H7C423 109 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 RPL36AP83881 106 aaKnown RBP6.11□□□□□ -1.43
UBR4-201ENST00000375218 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
UBR4-201ENST00000375218 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.11□□□□□ -1.432e-7■■■■■ 38.9
UBR4-201ENST00000375218 DNAL4O96015 105 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 ZNF525Q8N782 197 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 PRR4Q16378 134 aa6.11□□□□□ -1.43
UBR4-201ENST00000375218 IGHV4-30-2A0A087WSY4 118 aa6.1□□□□□ -1.43
UBR4-201ENST00000375218 TRAV12-3A0A0B4J271 114 aa6.1□□□□□ -1.43
UBR4-201ENST00000375218 MINOS1-NBL1R4GNA1 71 aa6.1□□□□□ -1.43
UBR4-201ENST00000375218 ACANP16112 2415 aa6.09□□□□□ -1.43
UBR4-201ENST00000375218 KMT2AQ03164 3969 aa6.09□□□□□ -1.43
UBR4-201ENST00000375218 SMAD5-AS1Q9Y6J3 95 aa6.09□□□□□ -1.43
UBR4-201ENST00000375218 CFC1P0CG37 223 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 ZNF137PP52743 207 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 C10orf25Q5T742 122 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 ZNF833PQ6ZTB9 187 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 Q8NBF4 154 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 NPBQ8NG41 125 aa6.09□□□□□ -1.44
UBR4-201ENST00000375218 KAAG1Q9UBP8 84 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 C7orf33Q8WU49 177 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 WWC2-AS2Q96NR7 200 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 LIMD2Q9BT23 127 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 ZNF355PQ9NSJ1 428 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 IGKV1D-37A0A075B6S9 117 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 FXYD3Q14802 87 aa6.08□□□□□ -1.44
UBR4-201ENST00000375218 BCE1O60756 84 aa6.07□□□□□ -1.44
UBR4-201ENST00000375218 NOTCH3Q9UM47 2321 aa6.07□□□□□ -1.44
UBR4-201ENST00000375218 S4R3C0 116 aa6.07□□□□□ -1.44
UBR4-201ENST00000375218 V9GYV3 84 aa6.07□□□□□ -1.44
UBR4-201ENST00000375218 ODF3BA8MYP8 253 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 C10orf55Q5SWW7 151 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 C2orf66Q6UXQ4 117 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 MAST4O15021 2626 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 NDPQ00604 133 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 DOPEY2Q9Y3R5 2298 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 TLN2Q9Y4G6 2542 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 FBN3Q75N90 2809 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 IGHV7-4-1A0A0J9YVY3 117 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
UBR4-201ENST00000375218 KRTAP1-1Q07627 177 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 TMEM167BQ9NRX6 74 aa6.06□□□□□ -1.44
UBR4-201ENST00000375218 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms