RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 DDTP30046 118 aa7.29□□□□□ -1.24
HLA-DQA1-202ENST00000374949 C10orf126Q8N4M7 172 aa7.29□□□□□ -1.24
HLA-DQA1-202ENST00000374949 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 MYMXA0A1B0GTQ4 84 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 COX7A2LO14548 114 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 FOXI1Q12951 378 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 Q5VSD8 79 aa7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 Q6ZRN7 208 aaPredicted RBP7.28□□□□□ -1.24
HLA-DQA1-202ENST00000374949 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
HLA-DQA1-202ENST00000374949 TTTY13Q9BZ97 58 aa7.27□□□□□ -1.25
HLA-DQA1-202ENST00000374949 FAT1Q14517 4588 aa7.27□□□□□ -1.25
HLA-DQA1-202ENST00000374949 MALP21145 153 aa7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 HNRNPA3P51991 378 aaKnown RBP7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 XGP55808 180 aa7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 TSPEAR-AS2P59090 65 aa7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 COX7B2Q8TF08 81 aa7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 RMI2Q96E14 147 aa7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
HLA-DQA1-202ENST00000374949 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
HLA-DQA1-202ENST00000374949 APOMO95445 188 aa7.25□□□□□ -1.25
HLA-DQA1-202ENST00000374949 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
HLA-DQA1-202ENST00000374949 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
HLA-DQA1-202ENST00000374949 NDUFA12Q9UI09 145 aa7.25□□□□□ -1.25
HLA-DQA1-202ENST00000374949 PRSS2P07478 247 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 KRTAP10-1P60331 282 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 Q9HAA7 133 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 TOMM7Q9P0U1 55 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 TP73-AS1Q9UF72 201 aa7.24□□□□□ -1.25
HLA-DQA1-202ENST00000374949 EREGO14944 169 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 NDUFA1O15239 70 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 CTAG1AP78358 180 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 HAMPP81172 84 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 ORAOV1Q8WV07 137 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 PGPEP1Q9NXJ5 209 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 COX11Q9Y6N1 276 aa7.23□□□□□ -1.25
HLA-DQA1-202ENST00000374949 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
HLA-DQA1-202ENST00000374949 Q8IZM0 81 aa7.22□□□□□ -1.25
HLA-DQA1-202ENST00000374949 TM2D2Q9BX73 214 aa7.22□□□□□ -1.25
HLA-DQA1-202ENST00000374949 A0A0J9YXY3 114 aa7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 LINC00587B1AMM8 73 aa7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 HERV-K104P63124 156 aa7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 SFTA2Q6UW10 78 aa7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 ZNF625Q96I27 306 aaPredicted RBP7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 SRRM2Q9UQ35 2752 aaKnown RBP7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.26
HLA-DQA1-202ENST00000374949 A0A087WTM6 91 aa7.2□□□□□ -1.26
HLA-DQA1-202ENST00000374949 CKS1BP61024 79 aa7.2□□□□□ -1.26
HLA-DQA1-202ENST00000374949 KIAA0087Q14695 138 aa7.2□□□□□ -1.26
HLA-DQA1-202ENST00000374949 CXCL5P42830 114 aa7.19□□□□□ -1.26
HLA-DQA1-202ENST00000374949 SPAG11BQ08648 103 aa7.19□□□□□ -1.26
HLA-DQA1-202ENST00000374949 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
HLA-DQA1-202ENST00000374949 TAL2Q16559 108 aa7.19□□□□□ -1.26
HLA-DQA1-202ENST00000374949 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
HLA-DQA1-202ENST00000374949 TIMM17BO60830 172 aa7.18□□□□□ -1.26
HLA-DQA1-202ENST00000374949 HSD52Q0P140 79 aa7.18□□□□□ -1.26
HLA-DQA1-202ENST00000374949 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
HLA-DQA1-202ENST00000374949 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
HLA-DQA1-202ENST00000374949 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
HLA-DQA1-202ENST00000374949 TMEM238C9JI98 176 aa7.17□□□□□ -1.26
HLA-DQA1-202ENST00000374949 M0R143 59 aa7.17□□□□□ -1.26
HLA-DQA1-202ENST00000374949 GCSHP23434 173 aa7.17□□□□□ -1.26
HLA-DQA1-202ENST00000374949 MEIG1Q5JSS6 88 aa7.17□□□□□ -1.26
HLA-DQA1-202ENST00000374949 NTN5Q8WTR8 489 aaPredicted RBP7.17□□□□□ -1.26
HLA-DQA1-202ENST00000374949 F8WDY8 70 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 PSCAO43653 123 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 HINT1P49773 126 aaPredicted RBP7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 HIGD2BQ4VC39 106 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 C2orf82Q6UX34 121 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 Q6ZVH6 145 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 CEND1Q8N111 149 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 C15orf56Q8N910 161 aa7.16□□□□□ -1.26
HLA-DQA1-202ENST00000374949 GVQW2A0A096LPI5 108 aaPredicted RBP7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 J3QL48 77 aa7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 ADAMTSL4-AS1Q5T5F5 129 aa7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 LINC00526Q96FQ7 95 aa7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 LITAFQ99732 161 aa7.15□□□□□ -1.26
HLA-DQA1-202ENST00000374949 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 SMIM13P0DJ93 91 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 LINC00158P58513 81 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 BATFQ16520 125 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 BVES-AS1Q5T3Y7 98 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 UNQ6190/PRO20217Q6UXQ8 127 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 CAMK2N2Q96S95 79 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
HLA-DQA1-202ENST00000374949 A0A0U1RRA0 63 aa7.13□□□□□ -1.27
HLA-DQA1-202ENST00000374949 IFITM1P13164 125 aa7.13□□□□□ -1.27
HLA-DQA1-202ENST00000374949 PTTG1IPP53801 180 aa7.13□□□□□ -1.27
HLA-DQA1-202ENST00000374949 COX17Q14061 63 aa7.13□□□□□ -1.27
HLA-DQA1-202ENST00000374949 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms