RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
HLA-DMA-201ENST00000374843 C2orf48Q96LS8 159 aa11.33□□□□□ -0.6
HLA-DMA-201ENST00000374843 MIEN1Q9BRT3 115 aa11.33□□□□□ -0.6
HLA-DMA-201ENST00000374843 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
HLA-DMA-201ENST00000374843 HERV-K104P63124 156 aa11.32□□□□□ -0.6
HLA-DMA-201ENST00000374843 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
HLA-DMA-201ENST00000374843 RYR2Q92736 4967 aa11.32□□□□□ -0.6
HLA-DMA-201ENST00000374843 LRCOL1A6NCL2 159 aa11.31□□□□□ -0.6
HLA-DMA-201ENST00000374843 WFDC2Q14508 124 aa11.31□□□□□ -0.6
HLA-DMA-201ENST00000374843 C2orf91Q6ZV80 131 aa11.31□□□□□ -0.6
HLA-DMA-201ENST00000374843 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
HLA-DMA-201ENST00000374843 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
HLA-DMA-201ENST00000374843 CKS1BP61024 79 aa11.3□□□□□ -0.6
HLA-DMA-201ENST00000374843 C14orf177Q52M58 125 aa11.3□□□□□ -0.6
HLA-DMA-201ENST00000374843 HIGD1BQ9P298 99 aa11.3□□□□□ -0.6
HLA-DMA-201ENST00000374843 C2orf82Q6UX34 121 aa11.29□□□□□ -0.6
HLA-DMA-201ENST00000374843 KMT2CQ8NEZ4 4911 aaKnown RBP11.28□□□□□ -0.6
HLA-DMA-201ENST00000374843 LECT2O14960 151 aa11.28□□□□□ -0.6
HLA-DMA-201ENST00000374843 TIMM17BO60830 172 aa11.28□□□□□ -0.6
HLA-DMA-201ENST00000374843 LINC00526Q96FQ7 95 aa11.28□□□□□ -0.6
HLA-DMA-201ENST00000374843 SCGB1D4Q6XE38 83 aa11.27□□□□□ -0.61
HLA-DMA-201ENST00000374843 TRBV30A0A0K0K1B3 111 aa11.26□□□□□ -0.61
HLA-DMA-201ENST00000374843 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
HLA-DMA-201ENST00000374843 CAMK2N2Q96S95 79 aa11.26□□□□□ -0.61
HLA-DMA-201ENST00000374843 LITAFQ99732 161 aa11.26□□□□□ -0.61
HLA-DMA-201ENST00000374843 A0A087WTM6 91 aa11.25□□□□□ -0.61
HLA-DMA-201ENST00000374843 HNRNPA3P51991 378 aaKnown RBP11.25□□□□□ -0.61
HLA-DMA-201ENST00000374843 CNBPP62633 177 aaKnown RBP11.25□□□□□ -0.61
HLA-DMA-201ENST00000374843 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
HLA-DMA-201ENST00000374843 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
HLA-DMA-201ENST00000374843 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 RTL8CO15255 209 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 SLPIP03973 132 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 DDTP30046 118 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 SYCNQ0VAF6 134 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 Q6ZRU5 148 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
HLA-DMA-201ENST00000374843 TMEM238C9JI98 176 aa11.23□□□□□ -0.61
HLA-DMA-201ENST00000374843 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
HLA-DMA-201ENST00000374843 CARD19Q96LW7 228 aa11.23□□□□□ -0.61
HLA-DMA-201ENST00000374843 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
HLA-DMA-201ENST00000374843 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
HLA-DMA-201ENST00000374843 COX17Q14061 63 aa11.22□□□□□ -0.61
HLA-DMA-201ENST00000374843 MEIG1Q5JSS6 88 aa11.22□□□□□ -0.61
HLA-DMA-201ENST00000374843 Q8N814 137 aa11.22□□□□□ -0.61
HLA-DMA-201ENST00000374843 SPANXDQ9BXN6 97 aa11.22□□□□□ -0.61
HLA-DMA-201ENST00000374843 SPANXCQ9NY87 97 aa11.22□□□□□ -0.61
HLA-DMA-201ENST00000374843 CIRBPQ14011 172 aaKnown RBP11.21□□□□□ -0.61
HLA-DMA-201ENST00000374843 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
HLA-DMA-201ENST00000374843 Q6ZVH6 145 aa11.2□□□□□ -0.62
HLA-DMA-201ENST00000374843 HSD52Q0P140 79 aa11.19□□□□□ -0.62
HLA-DMA-201ENST00000374843 TAL2Q16559 108 aa11.19□□□□□ -0.62
HLA-DMA-201ENST00000374843 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
HLA-DMA-201ENST00000374843 PPDPFQ9H3Y8 114 aa11.19□□□□□ -0.62
HLA-DMA-201ENST00000374843 HECTD4Q9Y4D8 3996 aa11.18□□□□□ -0.62
HLA-DMA-201ENST00000374843 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
HLA-DMA-201ENST00000374843 TNP2Q05952 138 aa11.18□□□□□ -0.62
HLA-DMA-201ENST00000374843 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
HLA-DMA-201ENST00000374843 PTTG1IPP53801 180 aa11.17□□□□□ -0.62
HLA-DMA-201ENST00000374843 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
HLA-DMA-201ENST00000374843 PFN2P35080 140 aa11.16□□□□□ -0.62
HLA-DMA-201ENST00000374843 LINC00158P58513 81 aa11.16□□□□□ -0.62
HLA-DMA-201ENST00000374843 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.15□□□□□ -0.62
HLA-DMA-201ENST00000374843 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
HLA-DMA-201ENST00000374843 IFITM1P13164 125 aa11.15□□□□□ -0.62
HLA-DMA-201ENST00000374843 CTAG1AP78358 180 aa11.15□□□□□ -0.62
HLA-DMA-201ENST00000374843 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
HLA-DMA-201ENST00000374843 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
HLA-DMA-201ENST00000374843 A0A0U1RRA0 63 aa11.14□□□□□ -0.63
HLA-DMA-201ENST00000374843 EREGO14944 169 aa11.14□□□□□ -0.63
HLA-DMA-201ENST00000374843 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
HLA-DMA-201ENST00000374843 DAND5Q8N907 189 aa11.14□□□□□ -0.63
HLA-DMA-201ENST00000374843 PCP4L1A6NKN8 68 aa11.13□□□□□ -0.63
HLA-DMA-201ENST00000374843 GCSHP23434 173 aa11.13□□□□□ -0.63
HLA-DMA-201ENST00000374843 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 CEND1Q8N111 149 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 LINC00308Q8TCZ7 52 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 COPS9Q8WXC6 57 aa11.12□□□□□ -0.63
HLA-DMA-201ENST00000374843 SND1-IT1Q9HBX3 110 aa11.11□□□□□ -0.63
HLA-DMA-201ENST00000374843 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
HLA-DMA-201ENST00000374843 PKD1P98161 4303 aa11.1□□□□□ -0.63
HLA-DMA-201ENST00000374843 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
HLA-DMA-201ENST00000374843 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
HLA-DMA-201ENST00000374843 M0R143 59 aa11.1□□□□□ -0.63
HLA-DMA-201ENST00000374843 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
HLA-DMA-201ENST00000374843 Q6ZRP5 223 aa11.1□□□□□ -0.63
HLA-DMA-201ENST00000374843 BVES-AS1Q5T3Y7 98 aa11.09□□□□□ -0.63
HLA-DMA-201ENST00000374843 MUSTN1Q8IVN3 82 aa11.09□□□□□ -0.63
HLA-DMA-201ENST00000374843 RYR3Q15413 4870 aa11.09□□□□□ -0.63
HLA-DMA-201ENST00000374843 FXYD2P54710 66 aa11.08□□□□□ -0.64
HLA-DMA-201ENST00000374843 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
HLA-DMA-201ENST00000374843 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
HLA-DMA-201ENST00000374843 NPC2P61916 151 aa11.06□□□□□ -0.64
HLA-DMA-201ENST00000374843 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
HLA-DMA-201ENST00000374843 TMEM238LA0A1B0GVL6 79 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms