RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 Q8N814 137 aa10.33□□□□□ -0.76
TRAF1-201ENST00000373887 CRYGAP11844 174 aa10.33□□□□□ -0.76
TRAF1-201ENST00000373887 ODF3L2Q3SX64 289 aa10.32□□□□□ -0.76
TRAF1-201ENST00000373887 COX6A2Q02221 97 aa10.31□□□□□ -0.76
TRAF1-201ENST00000373887 MRGPRG-AS1Q2M3A8 158 aa10.31□□□□□ -0.76
TRAF1-201ENST00000373887 TRBV7-7A0A0K0K1E9 115 aa10.31□□□□□ -0.76
TRAF1-201ENST00000373887 Q6ZTC4 211 aa10.31□□□□□ -0.76
TRAF1-201ENST00000373887 IGLV5-52A0A0A0MRZ9 124 aa10.3□□□□□ -0.76
TRAF1-201ENST00000373887 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
TRAF1-201ENST00000373887 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
TRAF1-201ENST00000373887 PIEZO1Q92508 2521 aa10.3□□□□□ -0.76
TRAF1-201ENST00000373887 H0Y9P7 68 aa10.3□□□□□ -0.76
TRAF1-201ENST00000373887 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
TRAF1-201ENST00000373887 HCFC1P51610 2035 aa10.29□□□□□ -0.76
TRAF1-201ENST00000373887 KLLNB2CW77 178 aa10.29□□□□□ -0.76
TRAF1-201ENST00000373887 Q9BRP9 147 aa10.29□□□□□ -0.76
TRAF1-201ENST00000373887 NAV3Q8IVL0 2385 aa10.29□□□□□ -0.76
TRAF1-201ENST00000373887 EXPH5Q8NEV8 1989 aa10.29□□□□□ -0.76
TRAF1-201ENST00000373887 WDR87Q6ZQQ6 2873 aa10.29□□□□□ -0.76
TRAF1-201ENST00000373887 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
TRAF1-201ENST00000373887 YPEL4Q96NS1 127 aa10.28□□□□□ -0.76
TRAF1-201ENST00000373887 LINC00575Q6W349 94 aa10.28□□□□□ -0.76
TRAF1-201ENST00000373887 LINC00242Q5T6M2 205 aa10.27□□□□□ -0.77
TRAF1-201ENST00000373887 Q8N3U1 123 aa10.27□□□□□ -0.77
TRAF1-201ENST00000373887 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
TRAF1-201ENST00000373887 Q9UF83 564 aa10.26□□□□□ -0.77
TRAF1-201ENST00000373887 A0A087WSZ3 146 aa10.25□□□□□ -0.77
TRAF1-201ENST00000373887 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
TRAF1-201ENST00000373887 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
TRAF1-201ENST00000373887 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
TRAF1-201ENST00000373887 C16orf95Q9H693 158 aa10.24□□□□□ -0.77
TRAF1-201ENST00000373887 ATG2AQ2TAZ0 1938 aa10.24□□□□□ -0.77
TRAF1-201ENST00000373887 EGFEM1PQ0D2K5 195 aa10.23□□□□□ -0.77
TRAF1-201ENST00000373887 HCG22E2RYF7 251 aa10.23□□□□□ -0.77
TRAF1-201ENST00000373887 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
TRAF1-201ENST00000373887 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
TRAF1-201ENST00000373887 CPAMD8Q8IZJ3 1885 aa10.23□□□□□ -0.77
TRAF1-201ENST00000373887 ZNF580Q9UK33 172 aa10.22□□□□□ -0.77
TRAF1-201ENST00000373887 A8MTW9 85 aa10.21□□□□□ -0.77
TRAF1-201ENST00000373887 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.77
TRAF1-201ENST00000373887 PRLHP81277 87 aa10.21□□□□□ -0.77
TRAF1-201ENST00000373887 ADAMTSL4-AS1Q5T5F5 129 aa10.21□□□□□ -0.77
TRAF1-201ENST00000373887 MYO18BQ8IUG5 2567 aa10.21□□□□□ -0.78
TRAF1-201ENST00000373887 CENPFP49454 3210 aa10.2□□□□□ -0.78
TRAF1-201ENST00000373887 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
TRAF1-201ENST00000373887 IGKV2-30P06310 120 aa10.19□□□□□ -0.78
TRAF1-201ENST00000373887 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
TRAF1-201ENST00000373887 C7orf65Q6ZTY9 151 aa10.18□□□□□ -0.78
TRAF1-201ENST00000373887 C2orf48Q96LS8 159 aa10.17□□□□□ -0.78
TRAF1-201ENST00000373887 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
TRAF1-201ENST00000373887 FHL2Q14192 279 aa10.16□□□□□ -0.78
TRAF1-201ENST00000373887 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
TRAF1-201ENST00000373887 TMEM254Q8TBM7 123 aa10.15□□□□□ -0.78
TRAF1-201ENST00000373887 FSHBP01225 129 aa10.14□□□□□ -0.79
TRAF1-201ENST00000373887 C1orf64Q8NEQ6 169 aa10.14□□□□□ -0.79
TRAF1-201ENST00000373887 URB1-AS1Q96HZ7 61 aa10.14□□□□□ -0.79
TRAF1-201ENST00000373887 Q6ZSN1 163 aa10.13□□□□□ -0.79
TRAF1-201ENST00000373887 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
TRAF1-201ENST00000373887 UTRNP46939 3433 aa10.11□□□□□ -0.79
TRAF1-201ENST00000373887 SMIM29Q86T20 159 aa10.11□□□□□ -0.79
TRAF1-201ENST00000373887 LINC00846Q9NV44 126 aa10.11□□□□□ -0.79
TRAF1-201ENST00000373887 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
TRAF1-201ENST00000373887 A0A1B0GU69 56 aa10.1□□□□□ -0.79
TRAF1-201ENST00000373887 TET2Q6N021 2002 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-201ENST00000373887 LINC00310P59036 64 aa10.1□□□□□ -0.79
TRAF1-201ENST00000373887 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
TRAF1-201ENST00000373887 FHL3Q13643 280 aa10.09□□□□□ -0.79
TRAF1-201ENST00000373887 Q6ZRU5 148 aa10.09□□□□□ -0.79
TRAF1-201ENST00000373887 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
TRAF1-201ENST00000373887 KRTAP24-1Q3LI83 254 aa10.08□□□□□ -0.8
TRAF1-201ENST00000373887 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
TRAF1-201ENST00000373887 LYPD5Q6UWN5 251 aa10.08□□□□□ -0.8
TRAF1-201ENST00000373887 EML5Q05BV3 1969 aa10.08□□□□□ -0.8
TRAF1-201ENST00000373887 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
TRAF1-201ENST00000373887 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
TRAF1-201ENST00000373887 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
TRAF1-201ENST00000373887 LINC00337Q8N6G1 96 aa10.07□□□□□ -0.8
TRAF1-201ENST00000373887 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
TRAF1-201ENST00000373887 AMELXQ99217 191 aa10.06□□□□□ -0.8
TRAF1-201ENST00000373887 MDFIQ99750 246 aa10.05□□□□□ -0.8
TRAF1-201ENST00000373887 IGLV8-61A0A075B6I0 122 aa10.04□□□□□ -0.8
TRAF1-201ENST00000373887 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
TRAF1-201ENST00000373887 KIAA0087Q14695 138 aa10.03□□□□□ -0.8
TRAF1-201ENST00000373887 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.81
TRAF1-201ENST00000373887 COL4A2P08572 1712 aa10.02□□□□□ -0.81
TRAF1-201ENST00000373887 NHLRC4P0CG21 123 aaPredicted RBP10.02□□□□□ -0.81
TRAF1-201ENST00000373887 LRRK2Q5S007 2527 aa10.01□□□□□ -0.81
TRAF1-201ENST00000373887 MOBPQ13875 183 aa10□□□□□ -0.81
TRAF1-201ENST00000373887 ZFYVE26Q68DK2 2539 aa9.99□□□□□ -0.81
TRAF1-201ENST00000373887 CXCL6P80162 114 aa9.99□□□□□ -0.81
TRAF1-201ENST00000373887 AGRNO00468 2067 aa9.99□□□□□ -0.81
TRAF1-201ENST00000373887 DOPEY1Q5JWR5 2465 aa9.98□□□□□ -0.81
TRAF1-201ENST00000373887 ACYP2P14621 99 aa9.98□□□□□ -0.81
TRAF1-201ENST00000373887 C4orf26Q17RF5 130 aa9.98□□□□□ -0.81
TRAF1-201ENST00000373887 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
TRAF1-201ENST00000373887 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
TRAF1-201ENST00000373887 ANKRD11Q6UB99 2663 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-201ENST00000373887 SPATA3Q8NHX4 192 aa9.97□□□□□ -0.81
TRAF1-201ENST00000373887 ABCA12Q86UK0 2595 aa9.97□□□□□ -0.81
TRAF1-201ENST00000373887 F8WDY8 70 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms