RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
RCC1-201ENST00000373831 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
RCC1-201ENST00000373831 NDUFA1O15239 70 aa9.54□□□□□ -0.88
RCC1-201ENST00000373831 PSCAO43653 123 aa9.54□□□□□ -0.88
RCC1-201ENST00000373831 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
RCC1-201ENST00000373831 PRSS2P07478 247 aa9.53□□□□□ -0.88
RCC1-201ENST00000373831 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
RCC1-201ENST00000373831 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
RCC1-201ENST00000373831 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
RCC1-201ENST00000373831 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.89
RCC1-201ENST00000373831 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
RCC1-201ENST00000373831 CFAP161Q6P656 301 aa9.52□□□□□ -0.89
RCC1-201ENST00000373831 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
RCC1-201ENST00000373831 A0A0J9YXY3 114 aa9.51□□□□□ -0.89
RCC1-201ENST00000373831 TSTD3H0UI37 97 aa9.51□□□□□ -0.89
RCC1-201ENST00000373831 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
RCC1-201ENST00000373831 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
RCC1-201ENST00000373831 SLPIP03973 132 aa9.5□□□□□ -0.89
RCC1-201ENST00000373831 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
RCC1-201ENST00000373831 CKS1BP61024 79 aa9.5□□□□□ -0.89
RCC1-201ENST00000373831 KIAA1109Q2LD37 5005 aa9.49□□□□□ -0.89
RCC1-201ENST00000373831 HECTD4Q9Y4D8 3996 aa9.49□□□□□ -0.89
RCC1-201ENST00000373831 CXCL5P42830 114 aa9.49□□□□□ -0.89
RCC1-201ENST00000373831 C2orf48Q96LS8 159 aa9.49□□□□□ -0.89
RCC1-201ENST00000373831 RTL8CO15255 209 aa9.48□□□□□ -0.89
RCC1-201ENST00000373831 LITAFQ99732 161 aa9.48□□□□□ -0.89
RCC1-201ENST00000373831 HERV-K104P63124 156 aa9.47□□□□□ -0.89
RCC1-201ENST00000373831 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
RCC1-201ENST00000373831 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
RCC1-201ENST00000373831 Q6ZRU5 148 aa9.47□□□□□ -0.89
RCC1-201ENST00000373831 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
RCC1-201ENST00000373831 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
RCC1-201ENST00000373831 SFTA2Q6UW10 78 aa9.46□□□□□ -0.89
RCC1-201ENST00000373831 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
RCC1-201ENST00000373831 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.9
RCC1-201ENST00000373831 A0A087WTM6 91 aa9.46□□□□□ -0.9
RCC1-201ENST00000373831 DDTP30046 118 aa9.46□□□□□ -0.9
RCC1-201ENST00000373831 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
RCC1-201ENST00000373831 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
RCC1-201ENST00000373831 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
RCC1-201ENST00000373831 SMIM13P0DJ93 91 aa9.45□□□□□ -0.9
RCC1-201ENST00000373831 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
RCC1-201ENST00000373831 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
RCC1-201ENST00000373831 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
RCC1-201ENST00000373831 PCP4L1A6NKN8 68 aa9.44□□□□□ -0.9
RCC1-201ENST00000373831 F8WDY8 70 aa9.44□□□□□ -0.9
RCC1-201ENST00000373831 TNP2Q05952 138 aa9.44□□□□□ -0.9
RCC1-201ENST00000373831 ERG28Q9UKR5 140 aa9.44□□□□□ -0.9
RCC1-201ENST00000373831 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
RCC1-201ENST00000373831 TIMM17BO60830 172 aa9.43□□□□□ -0.9
RCC1-201ENST00000373831 C14orf177Q52M58 125 aa9.43□□□□□ -0.9
RCC1-201ENST00000373831 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
RCC1-201ENST00000373831 Q8N814 137 aa9.43□□□□□ -0.9
RCC1-201ENST00000373831 DAND5Q8N907 189 aa9.43□□□□□ -0.9
RCC1-201ENST00000373831 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
RCC1-201ENST00000373831 PFN2P35080 140 aa9.42□□□□□ -0.9
RCC1-201ENST00000373831 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
RCC1-201ENST00000373831 CNBPP62633 177 aaKnown RBP9.41□□□□□ -0.9
RCC1-201ENST00000373831 CTAG1AP78358 180 aa9.41□□□□□ -0.9
RCC1-201ENST00000373831 SPANXB1Q9NS25 103 aaPredicted RBP9.41□□□□□ -0.9
RCC1-201ENST00000373831 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
RCC1-201ENST00000373831 TMEM238C9JI98 176 aa9.4□□□□□ -0.9
RCC1-201ENST00000373831 LINC00158P58513 81 aa9.4□□□□□ -0.9
RCC1-201ENST00000373831 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.9
RCC1-201ENST00000373831 SPANXCQ9NY87 97 aa9.4□□□□□ -0.9
RCC1-201ENST00000373831 PKD1P98161 4303 aa9.4□□□□□ -0.91
RCC1-201ENST00000373831 CIRBPQ14011 172 aaKnown RBP9.39□□□□□ -0.91
RCC1-201ENST00000373831 COX17Q14061 63 aa9.39□□□□□ -0.91
RCC1-201ENST00000373831 RNF151Q2KHN1 245 aa9.39□□□□□ -0.91
RCC1-201ENST00000373831 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
RCC1-201ENST00000373831 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
RCC1-201ENST00000373831 FUSP35637 526 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■■□□ 15.1
RCC1-201ENST00000373831 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
RCC1-201ENST00000373831 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
RCC1-201ENST00000373831 LINC00587B1AMM8 73 aa9.37□□□□□ -0.91
RCC1-201ENST00000373831 NPC2P61916 151 aa9.37□□□□□ -0.91
RCC1-201ENST00000373831 HSD52Q0P140 79 aa9.37□□□□□ -0.91
RCC1-201ENST00000373831 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
RCC1-201ENST00000373831 HIST1H4GQ99525 98 aa9.37□□□□□ -0.91
RCC1-201ENST00000373831 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
RCC1-201ENST00000373831 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
RCC1-201ENST00000373831 TAL2Q16559 108 aa9.36□□□□□ -0.91
RCC1-201ENST00000373831 Q6ZRP5 223 aa9.36□□□□□ -0.91
RCC1-201ENST00000373831 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
RCC1-201ENST00000373831 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
RCC1-201ENST00000373831 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
RCC1-201ENST00000373831 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.35□□□□□ -0.91
RCC1-201ENST00000373831 TLX1NBP0CAT3 122 aa9.35□□□□□ -0.91
RCC1-201ENST00000373831 LINC01620Q4KN68 170 aa9.35□□□□□ -0.91
RCC1-201ENST00000373831 Q6ZVH6 145 aa9.35□□□□□ -0.91
RCC1-201ENST00000373831 CEND1Q8N111 149 aa9.35□□□□□ -0.91
RCC1-201ENST00000373831 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
RCC1-201ENST00000373831 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
RCC1-201ENST00000373831 DYNC1H1Q14204 4646 aaKnown RBP9.34□□□□□ -0.92
RCC1-201ENST00000373831 GCSHP23434 173 aa9.33□□□□□ -0.92
RCC1-201ENST00000373831 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
RCC1-201ENST00000373831 FXYD2P54710 66 aa9.33□□□□□ -0.92
RCC1-201ENST00000373831 BVES-AS1Q5T3Y7 98 aa9.33□□□□□ -0.92
RCC1-201ENST00000373831 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
RCC1-201ENST00000373831 IFITM1P13164 125 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms