RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 LOC389332A0A1B0GUA5 103 aa7.67□□□□□ -1.18
TRAPPC3-201ENST00000373159 SRSF3P84103 164 aaKnown RBP7.67□□□□□ -1.18
TRAPPC3-201ENST00000373159 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
TRAPPC3-201ENST00000373159 MUC17Q685J3 4493 aa7.66□□□□□ -1.18
TRAPPC3-201ENST00000373159 IGIPA6NJ69 53 aa7.66□□□□□ -1.18
TRAPPC3-201ENST00000373159 Q8N8P6 123 aa7.66□□□□□ -1.18
TRAPPC3-201ENST00000373159 MAP1LC3AQ9H492 121 aa7.66□□□□□ -1.18
TRAPPC3-201ENST00000373159 F8VRH5 84 aa7.65□□□□□ -1.18
TRAPPC3-201ENST00000373159 HERVK_113P63121 156 aa7.65□□□□□ -1.18
TRAPPC3-201ENST00000373159 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
TRAPPC3-201ENST00000373159 K7EMI3 77 aa7.64□□□□□ -1.19
TRAPPC3-201ENST00000373159 SEC11AP67812 179 aa7.64□□□□□ -1.19
TRAPPC3-201ENST00000373159 ORMDL2Q53FV1 153 aa7.64□□□□□ -1.19
TRAPPC3-201ENST00000373159 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
TRAPPC3-201ENST00000373159 PAPPA-AS1Q5QFB9 102 aa7.63□□□□□ -1.19
TRAPPC3-201ENST00000373159 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
TRAPPC3-201ENST00000373159 hCG_2014768A0A024R1R8 64 aa7.62□□□□□ -1.19
TRAPPC3-201ENST00000373159 RPL37AP8A6NKH3 93 aa7.62□□□□□ -1.19
TRAPPC3-201ENST00000373159 CXCL5P42830 114 aa7.62□□□□□ -1.19
TRAPPC3-201ENST00000373159 KRTAP13-2Q52LG2 175 aa7.62□□□□□ -1.19
TRAPPC3-201ENST00000373159 FAM229BQ4G0N7 80 aa7.61□□□□□ -1.19
TRAPPC3-201ENST00000373159 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
TRAPPC3-201ENST00000373159 GEMIN7Q9H840 131 aaKnown RBP7.61□□□□□ -1.19
TRAPPC3-201ENST00000373159 IGLV5-37A0A075B6J1 123 aa7.6□□□□□ -1.19
TRAPPC3-201ENST00000373159 G0S2P27469 103 aa7.6□□□□□ -1.19
TRAPPC3-201ENST00000373159 CTAG1AP78358 180 aa7.6□□□□□ -1.19
TRAPPC3-201ENST00000373159 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
TRAPPC3-201ENST00000373159 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
TRAPPC3-201ENST00000373159 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
TRAPPC3-201ENST00000373159 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
TRAPPC3-201ENST00000373159 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
TRAPPC3-201ENST00000373159 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
TRAPPC3-201ENST00000373159 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
TRAPPC3-201ENST00000373159 UBE2AP49459 152 aa7.58□□□□□ -1.2
TRAPPC3-201ENST00000373159 PDZD11Q5EBL8 140 aa7.58□□□□□ -1.2
TRAPPC3-201ENST00000373159 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
TRAPPC3-201ENST00000373159 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
TRAPPC3-201ENST00000373159 COX7B2Q8TF08 81 aa7.57□□□□□ -1.2
TRAPPC3-201ENST00000373159 TOMM6Q96B49 74 aa7.57□□□□□ -1.2
TRAPPC3-201ENST00000373159 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
TRAPPC3-201ENST00000373159 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
TRAPPC3-201ENST00000373159 PNRC1Q12796 327 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC3-201ENST00000373159 ERASQ7Z444 233 aa7.56□□□□□ -1.2
TRAPPC3-201ENST00000373159 IGLV5-45A0A087WSX0 123 aa7.55□□□□□ -1.2
TRAPPC3-201ENST00000373159 IGKV2D-26A0A0A0MRZ7 120 aa7.55□□□□□ -1.2
TRAPPC3-201ENST00000373159 MT-ND4LP03901 98 aa7.55□□□□□ -1.2
TRAPPC3-201ENST00000373159 RAB5BP61020 215 aa7.55□□□□□ -1.2
TRAPPC3-201ENST00000373159 NKAPP1Q8N9T2 125 aa7.55□□□□□ -1.2
TRAPPC3-201ENST00000373159 ANAPC16Q96DE5 110 aa7.55□□□□□ -1.2
TRAPPC3-201ENST00000373159 SCGB3A1Q96QR1 104 aa7.54□□□□□ -1.2
TRAPPC3-201ENST00000373159 IGKV2-28A0A075B6P5 120 aa7.52□□□□□ -1.21
TRAPPC3-201ENST00000373159 LINC01549A6NIU2 74 aa7.52□□□□□ -1.21
TRAPPC3-201ENST00000373159 IGKV2D-28P01615 120 aa7.52□□□□□ -1.21
TRAPPC3-201ENST00000373159 ADCYAP1P18509 176 aa7.52□□□□□ -1.21
TRAPPC3-201ENST00000373159 SCO1O75880 301 aa7.51□□□□□ -1.21
TRAPPC3-201ENST00000373159 SPINK8P0C7L1 97 aa7.51□□□□□ -1.21
TRAPPC3-201ENST00000373159 PLEKHB2Q96CS7 222 aa7.51□□□□□ -1.21
TRAPPC3-201ENST00000373159 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
TRAPPC3-201ENST00000373159 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
TRAPPC3-201ENST00000373159 CST9LQ9H4G1 147 aa7.51□□□□□ -1.21
TRAPPC3-201ENST00000373159 ATP5LO75964 103 aa7.5□□□□□ -1.21
TRAPPC3-201ENST00000373159 PRLHP81277 87 aa7.5□□□□□ -1.21
TRAPPC3-201ENST00000373159 FAM19A1Q7Z5A9 133 aa7.5□□□□□ -1.21
TRAPPC3-201ENST00000373159 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
TRAPPC3-201ENST00000373159 LINC01546A6NGU7 62 aa7.48□□□□□ -1.21
TRAPPC3-201ENST00000373159 TMEM238C9JI98 176 aa7.48□□□□□ -1.21
TRAPPC3-201ENST00000373159 H3BRM9 83 aa7.48□□□□□ -1.21
TRAPPC3-201ENST00000373159 VPREB1P12018 145 aa7.48□□□□□ -1.21
TRAPPC3-201ENST00000373159 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
TRAPPC3-201ENST00000373159 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
TRAPPC3-201ENST00000373159 M0R378 163 aa7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 PFN2P35080 140 aa7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 RPL24P83731 157 aaKnown RBP7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 PMVKQ15126 192 aa7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 GNB1LQ9BYB4 327 aa7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 SND1-IT1Q9HBX3 110 aa7.47□□□□□ -1.21
TRAPPC3-201ENST00000373159 IGLV5-39A0A0G2JS06 123 aa7.46□□□□□ -1.22
TRAPPC3-201ENST00000373159 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC3-201ENST00000373159 CBLN2Q8IUK8 224 aa7.46□□□□□ -1.22
TRAPPC3-201ENST00000373159 A0A1B0GVG6 124 aa7.45□□□□□ -1.22
TRAPPC3-201ENST00000373159 COX17Q14061 63 aa7.45□□□□□ -1.22
TRAPPC3-201ENST00000373159 ERG28Q9UKR5 140 aa7.44□□□□□ -1.22
TRAPPC3-201ENST00000373159 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
TRAPPC3-201ENST00000373159 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
TRAPPC3-201ENST00000373159 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 TRAV9-1A0A075B6T8 112 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 RAB14P61106 215 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 ASB16-AS1Q495Z4 193 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 Q8NDZ9 215 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
TRAPPC3-201ENST00000373159 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC3-201ENST00000373159 FA2HQ7L5A8 372 aa7.4□□□□□ -1.22
TRAPPC3-201ENST00000373159 LINC01547P58512 204 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC3-201ENST00000373159 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms