RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 MDC1Q14676 2089 aaKnown RBP2.01□□□□□ -2.09
COL6A5-203ENST00000373157 A0A0G2JMZ2 1700 aa2.01□□□□□ -2.09
COL6A5-203ENST00000373157 LRRC37A2A6NM11 1700 aa2.01□□□□□ -2.09
COL6A5-203ENST00000373157 LRRC37AA6NMS7 1700 aa2.01□□□□□ -2.09
COL6A5-203ENST00000373157 TIAM2Q8IVF5 1701 aa2.01□□□□□ -2.09
COL6A5-203ENST00000373157 DUOX1Q9NRD9 1551 aa2.01□□□□□ -2.09
COL6A5-203ENST00000373157 SMIM27A0A1W2PRY6 76 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 DEFB134Q4QY38 66 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 ENHOQ6UWT2 76 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 TTTY12Q9BZ98 90 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 IGKV2-40A0A087WW87 121 aaPredicted RBP2□□□□□ -2.09
COL6A5-203ENST00000373157 IGKV2D-40P01614 121 aaPredicted RBP2□□□□□ -2.09
COL6A5-203ENST00000373157 IGLV3-1P01715 115 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 RNASE3P12724 160 aaKnown RBP2□□□□□ -2.09
COL6A5-203ENST00000373157 IL9P15248 144 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 TMEM14CQ9P0S9 112 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 CCL26Q9Y258 94 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 PAPPA2Q9BXP8 1791 aa2□□□□□ -2.09
COL6A5-203ENST00000373157 TRAV21A0A0B4J279 112 aa1.99□□□□□ -2.09
COL6A5-203ENST00000373157 IGKV3OR2-268A0A0C4DH90 116 aa1.99□□□□□ -2.09
COL6A5-203ENST00000373157 C10orf113Q5VZT2 155 aa1.99□□□□□ -2.09
COL6A5-203ENST00000373157 TRBV6-1A0A0K0K1D8 114 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 RPL37AP61513 92 aaKnown RBP1.98□□□□□ -2.09
COL6A5-203ENST00000373157 ESPL1Q14674 2120 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 GAFA1Q96PS6 74 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 K7EMI3 77 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 HRES1P13985 223 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 ZNF137PP52743 207 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 HCP5Q6MZN7 132 aa1.98□□□□□ -2.09
COL6A5-203ENST00000373157 PRRC2BQ5JSZ5 2229 aaKnown RBP1.97□□□□□ -2.09
COL6A5-203ENST00000373157 ZNF318Q5VUA4 2279 aa1.97□□□□□ -2.09
COL6A5-203ENST00000373157 IGLV4-60A0A075B6I1 120 aa1.97□□□□□ -2.09
COL6A5-203ENST00000373157 CR1P17927 2039 aa1.97□□□□□ -2.09
COL6A5-203ENST00000373157 RP1P56715 2156 aa1.96□□□□□ -2.1
COL6A5-203ENST00000373157 A0A0G2JQZ4 141 aa1.96□□□□□ -2.1
COL6A5-203ENST00000373157 A0A1W2PNN7 141 aa1.96□□□□□ -2.1
COL6A5-203ENST00000373157 FXYD6P3P58550 94 aa1.96□□□□□ -2.1
COL6A5-203ENST00000373157 FXYD3Q14802 87 aa1.96□□□□□ -2.1
COL6A5-203ENST00000373157 TIMM8BQ9Y5J9 83 aaPredicted RBP1.96□□□□□ -2.1
COL6A5-203ENST00000373157 CACNA1DQ01668 2161 aa1.96□□□□□ -2.1
COL6A5-203ENST00000373157 KRTAP1-4P0C5Y4 121 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 MED12Q93074 2177 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 SPRR4Q96PI1 79 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 PLAC8Q9NZF1 115 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 COL27A1Q8IZC6 1860 aaPredicted RBP1.95□□□□□ -2.1
COL6A5-203ENST00000373157 TNRC6BQ9UPQ9 1833 aaKnown RBP1.95□□□□□ -2.1
COL6A5-203ENST00000373157 TRGV4A0A0C4DH28 118 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
COL6A5-203ENST00000373157 RPL38P63173 70 aaKnown RBP1.95□□□□□ -2.1
COL6A5-203ENST00000373157 C10orf55Q5SWW7 151 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 LINC00322Q6ZN03 302 aaPredicted RBP1.95□□□□□ -2.1
COL6A5-203ENST00000373157 DEFB132Q7Z7B7 95 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 OBSCN-AS1Q96MR7 158 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 ADAMTS9Q9P2N4 1935 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 PRR14LQ5THK1 2151 aa1.95□□□□□ -2.1
COL6A5-203ENST00000373157 DNAJC13O75165 2243 aa1.94□□□□□ -2.1
COL6A5-203ENST00000373157 GOLGA4Q13439 2230 aaKnown RBP1.94□□□□□ -2.1
COL6A5-203ENST00000373157 ARHGAP32A7KAX9 2087 aa1.94□□□□□ -2.1
COL6A5-203ENST00000373157 IGKV2D-24A0A075B6R9 120 aa1.94□□□□□ -2.1
COL6A5-203ENST00000373157 M0R1W7 72 aa1.94□□□□□ -2.1
COL6A5-203ENST00000373157 INTS1Q8N201 2190 aaKnown RBP1.94□□□□□ -2.1
COL6A5-203ENST00000373157 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.93□□□□□ -2.1
COL6A5-203ENST00000373157 NBDYA0A0U1RRE5 68 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 LCE6AA0A183 80 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 SPINK4O60575 86 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 IGLV6-57P01721 117 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 ARL14EPLP0DKL9 152 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 ACYP2P14621 99 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 SPINK7P58062 85 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 COL4A1P02462 1669 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 TET1Q8NFU7 2136 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 TRGV1A0A0A0MS02 117 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 NDUFA4O00483 81 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 Q8N9L7 120 aa1.93□□□□□ -2.1
COL6A5-203ENST00000373157 PLXNB2O15031 1838 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 COL5A1P20908 1838 aaPredicted RBP1.92□□□□□ -2.1
COL6A5-203ENST00000373157 UNC13CQ8NB66 2214 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 TRGV2A0A075B6R0 118 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 A0A087WTM6 91 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 A0A1B0GU69 56 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 H3BRN7 92 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 IGLV3-19P01714 112 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 FXYD4P59646 89 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 ARFGEF3Q5TH69 2177 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 ZFHX3Q15911 3703 aa1.92□□□□□ -2.1
COL6A5-203ENST00000373157 A0A1B0GVY2 172 aa1.91□□□□□ -2.1
COL6A5-203ENST00000373157 I3L3M4 83 aa1.91□□□□□ -2.1
COL6A5-203ENST00000373157 DEFB114Q30KQ6 69 aa1.91□□□□□ -2.1
COL6A5-203ENST00000373157 ABCA4P78363 2273 aa1.91□□□□□ -2.1
COL6A5-203ENST00000373157 ZFHX2Q9C0A1 2572 aaPredicted RBP1.91□□□□□ -2.1
COL6A5-203ENST00000373157 LINC01546A6NGU7 62 aa1.9□□□□□ -2.1
COL6A5-203ENST00000373157 H0YGX0 51 aa1.9□□□□□ -2.1
COL6A5-203ENST00000373157 NCR3O14931 201 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms