RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
TMEM53-204ENST00000372243 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
TMEM53-204ENST00000372243 S100A12P80511 92 aa10.34□□□□□ -0.75
TMEM53-204ENST00000372243 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
TMEM53-204ENST00000372243 PAM16Q9Y3D7 125 aa10.34□□□□□ -0.75
TMEM53-204ENST00000372243 SLPIP03973 132 aa10.33□□□□□ -0.76
TMEM53-204ENST00000372243 SYCNQ0VAF6 134 aa10.33□□□□□ -0.76
TMEM53-204ENST00000372243 SPATA45Q537H7 98 aa10.33□□□□□ -0.76
TMEM53-204ENST00000372243 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
TMEM53-204ENST00000372243 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
TMEM53-204ENST00000372243 MYMXA0A1B0GTQ4 84 aa10.32□□□□□ -0.76
TMEM53-204ENST00000372243 RYR3Q15413 4870 aa10.32□□□□□ -0.76
TMEM53-204ENST00000372243 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
TMEM53-204ENST00000372243 HERV-K104P63124 156 aa10.31□□□□□ -0.76
TMEM53-204ENST00000372243 UNQ6190/PRO20217Q6UXQ8 127 aa10.31□□□□□ -0.76
TMEM53-204ENST00000372243 Q6ZRU5 148 aa10.31□□□□□ -0.76
TMEM53-204ENST00000372243 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.31□□□□□ -0.76
TMEM53-204ENST00000372243 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
TMEM53-204ENST00000372243 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
TMEM53-204ENST00000372243 CARD19Q96LW7 228 aa10.31□□□□□ -0.76
TMEM53-204ENST00000372243 C10orf25Q5T742 122 aa10.3□□□□□ -0.76
TMEM53-204ENST00000372243 PCP2Q8IVA1 136 aa10.3□□□□□ -0.76
TMEM53-204ENST00000372243 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
TMEM53-204ENST00000372243 COX8AP10176 69 aa10.29□□□□□ -0.76
TMEM53-204ENST00000372243 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
TMEM53-204ENST00000372243 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
TMEM53-204ENST00000372243 DNAH11Q96DT5 4516 aa10.27□□□□□ -0.76
TMEM53-204ENST00000372243 DLEU1O43261 78 aa10.27□□□□□ -0.76
TMEM53-204ENST00000372243 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.76
TMEM53-204ENST00000372243 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.76
TMEM53-204ENST00000372243 C12orf57Q99622 126 aa10.27□□□□□ -0.76
TMEM53-204ENST00000372243 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.76
TMEM53-204ENST00000372243 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
TMEM53-204ENST00000372243 PKD1P98161 4303 aa10.26□□□□□ -0.77
TMEM53-204ENST00000372243 A0A0J9YXY3 114 aa10.26□□□□□ -0.77
TMEM53-204ENST00000372243 COX17Q14061 63 aa10.26□□□□□ -0.77
TMEM53-204ENST00000372243 LINC00518Q8N0U6 118 aa10.26□□□□□ -0.77
TMEM53-204ENST00000372243 HECTD4Q9Y4D8 3996 aa10.25□□□□□ -0.77
TMEM53-204ENST00000372243 C14orf144Q96I85 54 aa10.25□□□□□ -0.77
TMEM53-204ENST00000372243 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
TMEM53-204ENST00000372243 IGLV5-52A0A0A0MRZ9 124 aa10.24□□□□□ -0.77
TMEM53-204ENST00000372243 A0A1B0GVY2 172 aa10.24□□□□□ -0.77
TMEM53-204ENST00000372243 TLX1NBP0CAT3 122 aa10.24□□□□□ -0.77
TMEM53-204ENST00000372243 PKIGQ9Y2B9 76 aa10.24□□□□□ -0.77
TMEM53-204ENST00000372243 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
TMEM53-204ENST00000372243 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
TMEM53-204ENST00000372243 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
TMEM53-204ENST00000372243 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
TMEM53-204ENST00000372243 TIMM17BO60830 172 aa10.22□□□□□ -0.77
TMEM53-204ENST00000372243 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
TMEM53-204ENST00000372243 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
TMEM53-204ENST00000372243 LOC107984640A0A0U1RRK4 108 aa10.22□□□□□ -0.77
TMEM53-204ENST00000372243 NDUFC2-KCTD14E9PQ53 114 aa10.22□□□□□ -0.77
TMEM53-204ENST00000372243 PFN2P35080 140 aa10.21□□□□□ -0.78
TMEM53-204ENST00000372243 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
TMEM53-204ENST00000372243 LINC00158P58513 81 aa10.19□□□□□ -0.78
TMEM53-204ENST00000372243 SDIM1Q6ZPB5 146 aa10.19□□□□□ -0.78
TMEM53-204ENST00000372243 LITAFQ99732 161 aa10.19□□□□□ -0.78
TMEM53-204ENST00000372243 UQCR10Q9UDW1 63 aa10.19□□□□□ -0.78
TMEM53-204ENST00000372243 TMEM238C9JI98 176 aa10.18□□□□□ -0.78
TMEM53-204ENST00000372243 FUSP35637 526 aaKnown RBP eCLIP10.18□□□□□ -0.78
TMEM53-204ENST00000372243 Q6ZRP5 223 aa10.18□□□□□ -0.78
TMEM53-204ENST00000372243 TP73-AS1Q9UF72 201 aa10.18□□□□□ -0.78
TMEM53-204ENST00000372243 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
TMEM53-204ENST00000372243 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 C16orf90A8MZG2 172 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 GCSHP23434 173 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 RPL18AQ02543 176 aaKnown RBP10.17□□□□□ -0.78
TMEM53-204ENST00000372243 LINC01620Q4KN68 170 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 ADAMTSL4-AS1Q5T5F5 129 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 Q6ZVH6 145 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
TMEM53-204ENST00000372243 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
TMEM53-204ENST00000372243 SPANXDQ9BXN6 97 aa10.16□□□□□ -0.78
TMEM53-204ENST00000372243 PRO1933Q9H354 126 aa10.16□□□□□ -0.78
TMEM53-204ENST00000372243 SPANXCQ9NY87 97 aa10.16□□□□□ -0.78
TMEM53-204ENST00000372243 TSTD3H0UI37 97 aa10.15□□□□□ -0.78
TMEM53-204ENST00000372243 PTTG1IPP53801 180 aa10.15□□□□□ -0.78
TMEM53-204ENST00000372243 C2orf91Q6ZV80 131 aa10.15□□□□□ -0.78
TMEM53-204ENST00000372243 MIEN1Q9BRT3 115 aa10.15□□□□□ -0.78
TMEM53-204ENST00000372243 LINC00474Q9P2X8 69 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 A0A096LNI7 61 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 DAND5Q8N907 189 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
TMEM53-204ENST00000372243 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
TMEM53-204ENST00000372243 IFITM1P13164 125 aa10.12□□□□□ -0.79
TMEM53-204ENST00000372243 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
TMEM53-204ENST00000372243 SRSF9Q13242 221 aaKnown RBP eCLIP10.11□□□□□ -0.79
TMEM53-204ENST00000372243 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
TMEM53-204ENST00000372243 COPS9Q8WXC6 57 aa10.11□□□□□ -0.79
TMEM53-204ENST00000372243 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
TMEM53-204ENST00000372243 IGKV2-24A0A0C4DH68 120 aa10.1□□□□□ -0.79
TMEM53-204ENST00000372243 LINC00308Q8TCZ7 52 aa10.1□□□□□ -0.79
TMEM53-204ENST00000372243 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms