RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 D6R8Y8 96 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 LINC00643Q86TS7 51 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 IGKV2-24A0A0C4DH68 120 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 SDHAF1A6NFY7 115 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 SUMO2P61956 95 aaKnown RBP4.95□□□□□ -1.62
USP1-202ENST00000371146 HBBP68871 147 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 ZFP2Q6ZN57 461 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 Q6ZSN1 163 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 SERP2Q8N6R1 65 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 CYSTM1Q9H1C7 97 aa4.95□□□□□ -1.62
USP1-202ENST00000371146 MRPS36P82909 103 aaKnown RBP4.94□□□□□ -1.62
USP1-202ENST00000371146 ESRGQ1W209 222 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 SDIM1Q6ZPB5 146 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 KLLNB2CW77 178 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
USP1-202ENST00000371146 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
USP1-202ENST00000371146 LOC107984156A0A0G2JMH3 177 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 SRSF9Q13242 221 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP1-202ENST00000371146 HIGD2BQ4VC39 106 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 ARL17AQ8IVW1 177 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 IFI27L1Q96BM0 104 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 HIST1H4GQ99525 98 aa4.94□□□□□ -1.62
USP1-202ENST00000371146 K7EQD1 137 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 GAS8-AS1O95177 125 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 IGLV2-11P01706 119 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 CACNG7P62955 275 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 IGLV2-8P01709 118 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 VPREB1P12018 145 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 IGKV2D-26A0A0A0MRZ7 120 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 HERVK_113P61574 105 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 SUMO4Q6EEV6 95 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 LINC00269Q8N2A0 174 aa4.93□□□□□ -1.62
USP1-202ENST00000371146 ZNF625Q96I27 306 aaPredicted RBP4.93□□□□□ -1.62
USP1-202ENST00000371146 TRBV7-6A0A0J9YX20 115 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 LINC01549A6NIU2 74 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 FP248Q71RG6 208 aaPredicted RBP4.92□□□□□ -1.62
USP1-202ENST00000371146 OPRPNQ99935 248 aaPredicted RBP4.92□□□□□ -1.62
USP1-202ENST00000371146 H3BS24 57 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 CSNK1G2-AS1Q8NCQ2 148 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 A0A096LNJ9 63 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 C1orf134Q5TEV5 83 aa4.92□□□□□ -1.62
USP1-202ENST00000371146 C3orf84H3BNL1 204 aa4.91□□□□□ -1.62
USP1-202ENST00000371146 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
USP1-202ENST00000371146 RPL18AQ02543 176 aaKnown RBP4.91□□□□□ -1.62
USP1-202ENST00000371146 FHL2Q14192 279 aa4.91□□□□□ -1.62
USP1-202ENST00000371146 TMEM243Q9BU79 118 aa4.91□□□□□ -1.62
USP1-202ENST00000371146 LENEPQ9Y5L5 61 aa4.91□□□□□ -1.62
USP1-202ENST00000371146 DNAH10OSP0CZ25 163 aa4.9□□□□□ -1.62
USP1-202ENST00000371146 RPL39P62891 51 aaKnown RBP4.9□□□□□ -1.62
USP1-202ENST00000371146 TEX49A0A1B0GTD5 131 aa4.9□□□□□ -1.62
USP1-202ENST00000371146 GFRA4Q9GZZ7 299 aa4.9□□□□□ -1.62
USP1-202ENST00000371146 ORMDL3Q8N138 153 aa4.9□□□□□ -1.63
USP1-202ENST00000371146 LINC00588Q9Y4M8 146 aa4.9□□□□□ -1.63
USP1-202ENST00000371146 K7EMI3 77 aa4.89□□□□□ -1.63
USP1-202ENST00000371146 HBDP02042 147 aa4.89□□□□□ -1.63
USP1-202ENST00000371146 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
USP1-202ENST00000371146 FAM104BQ5XKR9 115 aa4.89□□□□□ -1.63
USP1-202ENST00000371146 USP17L23D6RBM5 183 aa4.89□□□□□ -1.63
USP1-202ENST00000371146 MRPL51Q4U2R6 128 aaKnown RBP4.89□□□□□ -1.63
USP1-202ENST00000371146 ATXN8Q156A1 80 aa4.88□□□□□ -1.63
USP1-202ENST00000371146 LYPD5Q6UWN5 251 aa4.88□□□□□ -1.63
USP1-202ENST00000371146 C11orf72Q8NBR9 251 aa4.88□□□□□ -1.63
USP1-202ENST00000371146 PLAC8L1A1L4L8 177 aa4.88□□□□□ -1.63
USP1-202ENST00000371146 IFI27P40305 119 aaPredicted RBP4.88□□□□□ -1.63
USP1-202ENST00000371146 LINC00476Q8WZB0 136 aa4.88□□□□□ -1.63
USP1-202ENST00000371146 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
USP1-202ENST00000371146 LINC00315P59091 139 aa4.87□□□□□ -1.63
USP1-202ENST00000371146 MAPKAPK5-AS1Q8N8E1 139 aa4.87□□□□□ -1.63
USP1-202ENST00000371146 C16orf90A8MZG2 172 aa4.87□□□□□ -1.63
USP1-202ENST00000371146 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
USP1-202ENST00000371146 RBM12B-AS1Q9P1G2 102 aa4.86□□□□□ -1.63
USP1-202ENST00000371146 CSMD3Q7Z407 3707 aa4.86□□□□□ -1.63
USP1-202ENST00000371146 VCYO14598 125 aa4.86□□□□□ -1.63
USP1-202ENST00000371146 PRSS2P07478 247 aa4.86□□□□□ -1.63
USP1-202ENST00000371146 ORMDL2Q53FV1 153 aa4.86□□□□□ -1.63
USP1-202ENST00000371146 LINC01546A6NGU7 62 aa4.85□□□□□ -1.63
USP1-202ENST00000371146 I3L3M4 83 aa4.85□□□□□ -1.63
USP1-202ENST00000371146 ZNF22P17026 224 aaPredicted RBP4.85□□□□□ -1.63
USP1-202ENST00000371146 SERTAD4-AS1Q5TG53 156 aa4.85□□□□□ -1.63
USP1-202ENST00000371146 IGHV1-58A0A0C4DH39 117 aa4.85□□□□□ -1.63
USP1-202ENST00000371146 PRO1854Q9UHT4 67 aa4.85□□□□□ -1.63
USP1-202ENST00000371146 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 TRBV6-1A0A0K0K1D8 114 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 ATP5EP56381 51 aaPredicted RBP4.84□□□□□ -1.63
USP1-202ENST00000371146 REG3AQ06141 175 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 LINC00467Q9BRT7 94 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 A0A0J9YXV3 536 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 SS18Q15532 418 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 Q8N8P6 123 aa4.84□□□□□ -1.63
USP1-202ENST00000371146 IGLV4-60A0A075B6I1 120 aa4.84□□□□□ -1.64
USP1-202ENST00000371146 TRBV6-8A0A0A6YYG3 113 aa4.84□□□□□ -1.64
USP1-202ENST00000371146 NBDYA0A0U1RRE5 68 aa4.84□□□□□ -1.64
USP1-202ENST00000371146 TNP2Q05952 138 aa4.84□□□□□ -1.64
USP1-202ENST00000371146 C2orf82Q6UX34 121 aa4.84□□□□□ -1.64
USP1-202ENST00000371146 APLNQ9ULZ1 77 aa4.84□□□□□ -1.64
USP1-202ENST00000371146 TRBV6-4A0A1B0GX49 114 aa4.83□□□□□ -1.64
USP1-202ENST00000371146 KLK9Q2XQG4 91 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms