RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 TMEM170BQ5T4T1 132 aa12.13□□□□□ -0.47
NPM3-201ENST00000370110 CKS1BP61024 79 aa12.12□□□□□ -0.47
NPM3-201ENST00000370110 MAP1LC3CQ9BXW4 147 aa12.12□□□□□ -0.47
NPM3-201ENST00000370110 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
NPM3-201ENST00000370110 Q6ZSA8 131 aa12.11□□□□□ -0.47
NPM3-201ENST00000370110 MRPL35Q9NZE8 188 aaKnown RBP12.11□□□□□ -0.47
NPM3-201ENST00000370110 PKIGQ9Y2B9 76 aa12.11□□□□□ -0.47
NPM3-201ENST00000370110 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
NPM3-201ENST00000370110 F8WDY8 70 aa12.1□□□□□ -0.47
NPM3-201ENST00000370110 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
NPM3-201ENST00000370110 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
NPM3-201ENST00000370110 HMCN2Q8NDA2 5059 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 LRP1Q07954 4544 aaKnown RBP12.09□□□□□ -0.47
NPM3-201ENST00000370110 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 SMIM1B2RUZ4 78 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 F8VRH5 84 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 C2orf82Q6UX34 121 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 UNQ6190/PRO20217Q6UXQ8 127 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 LINC00528Q8N1L1 170 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
NPM3-201ENST00000370110 KRTAP29-1A8MX34 341 aaPredicted RBP12.08□□□□□ -0.48
NPM3-201ENST00000370110 KIAA0087Q14695 138 aa12.08□□□□□ -0.48
NPM3-201ENST00000370110 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
NPM3-201ENST00000370110 Q8IZM0 81 aa12.08□□□□□ -0.48
NPM3-201ENST00000370110 S100A6P06703 90 aa12.07□□□□□ -0.48
NPM3-201ENST00000370110 RPL18AQ02543 176 aaKnown RBP12.07□□□□□ -0.48
NPM3-201ENST00000370110 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
NPM3-201ENST00000370110 LOC107984640A0A0U1RRK4 108 aa12.06□□□□□ -0.48
NPM3-201ENST00000370110 PLA2G1BP04054 148 aaKnown RBP12.06□□□□□ -0.48
NPM3-201ENST00000370110 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
NPM3-201ENST00000370110 ODF1Q14990 250 aa12.06□□□□□ -0.48
NPM3-201ENST00000370110 C10orf25Q5T742 122 aa12.06□□□□□ -0.48
NPM3-201ENST00000370110 PMCHL2Q9BQD1 86 aa12.06□□□□□ -0.48
NPM3-201ENST00000370110 MAJINQ3KP22 176 aa12.05□□□□□ -0.48
NPM3-201ENST00000370110 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.05□□□□□ -0.48
NPM3-201ENST00000370110 RNF151Q2KHN1 245 aa12.04□□□□□ -0.48
NPM3-201ENST00000370110 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
NPM3-201ENST00000370110 DPM2O94777 84 aa12.03□□□□□ -0.48
NPM3-201ENST00000370110 S100A2P29034 98 aa12.03□□□□□ -0.48
NPM3-201ENST00000370110 CXCL5P42830 114 aa12.03□□□□□ -0.48
NPM3-201ENST00000370110 SCXQ7RTU7 201 aa12.03□□□□□ -0.48
NPM3-201ENST00000370110 A0A096LNI7 61 aa12.02□□□□□ -0.49
NPM3-201ENST00000370110 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.49
NPM3-201ENST00000370110 SYS1-DBNDD2H3BUS1 97 aa12.02□□□□□ -0.49
NPM3-201ENST00000370110 PLNP26678 52 aa12.02□□□□□ -0.49
NPM3-201ENST00000370110 KRTAP10-4P60372 401 aaPredicted RBP12.02□□□□□ -0.49
NPM3-201ENST00000370110 KRTDAPP60985 99 aa12.02□□□□□ -0.49
NPM3-201ENST00000370110 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
NPM3-201ENST00000370110 PANO1I0J062 215 aa12.01□□□□□ -0.49
NPM3-201ENST00000370110 IGKCP01834 107 aa12.01□□□□□ -0.49
NPM3-201ENST00000370110 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
NPM3-201ENST00000370110 FAT3Q8TDW7 4589 aa12.01□□□□□ -0.49
NPM3-201ENST00000370110 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
NPM3-201ENST00000370110 C9orf116Q5BN46 136 aaPredicted RBP12□□□□□ -0.49
NPM3-201ENST00000370110 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
NPM3-201ENST00000370110 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
NPM3-201ENST00000370110 PTTG1IPP53801 180 aa11.99□□□□□ -0.49
NPM3-201ENST00000370110 GAGE2EQ4V326 116 aa11.99□□□□□ -0.49
NPM3-201ENST00000370110 GAGE2DQ9UEU5 116 aa11.99□□□□□ -0.49
NPM3-201ENST00000370110 C3orf79P0CE67 100 aa11.98□□□□□ -0.49
NPM3-201ENST00000370110 HERVK_113P61574 105 aa11.98□□□□□ -0.49
NPM3-201ENST00000370110 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
NPM3-201ENST00000370110 STPG4Q8N801 248 aa11.98□□□□□ -0.49
NPM3-201ENST00000370110 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
NPM3-201ENST00000370110 A0A087WYN8 130 aa11.96□□□□□ -0.49
NPM3-201ENST00000370110 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
NPM3-201ENST00000370110 C20orf202A1L168 122 aa11.95□□□□□ -0.5
NPM3-201ENST00000370110 NDUFC2-KCTD14E9PQ53 114 aa11.95□□□□□ -0.5
NPM3-201ENST00000370110 SNRPEP62304 92 aaKnown RBP11.95□□□□□ -0.5
NPM3-201ENST00000370110 Q6ZRP5 223 aa11.95□□□□□ -0.5
NPM3-201ENST00000370110 ZNF625Q96I27 306 aaPredicted RBP11.95□□□□□ -0.5
NPM3-201ENST00000370110 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
NPM3-201ENST00000370110 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
NPM3-201ENST00000370110 PFN2P35080 140 aa11.92□□□□□ -0.5
NPM3-201ENST00000370110 SERTAD4-AS1Q5TG53 156 aa11.92□□□□□ -0.5
NPM3-201ENST00000370110 LINC01545Q5VT33 79 aa11.92□□□□□ -0.5
NPM3-201ENST00000370110 LEPROTO15243 131 aa11.91□□□□□ -0.5
NPM3-201ENST00000370110 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
NPM3-201ENST00000370110 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
NPM3-201ENST00000370110 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
NPM3-201ENST00000370110 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.5
NPM3-201ENST00000370110 PLAC8Q9NZF1 115 aa11.9□□□□□ -0.5
NPM3-201ENST00000370110 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
NPM3-201ENST00000370110 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
NPM3-201ENST00000370110 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
NPM3-201ENST00000370110 OXTP01178 125 aa11.88□□□□□ -0.51
NPM3-201ENST00000370110 MEIG1Q5JSS6 88 aa11.88□□□□□ -0.51
NPM3-201ENST00000370110 C7orf33Q8WU49 177 aa11.88□□□□□ -0.51
NPM3-201ENST00000370110 NDUFA12Q9UI09 145 aa11.88□□□□□ -0.51
NPM3-201ENST00000370110 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
NPM3-201ENST00000370110 MYMXA0A1B0GTQ4 84 aa11.87□□□□□ -0.51
NPM3-201ENST00000370110 A0A1W2PNN7 141 aa11.87□□□□□ -0.51
NPM3-201ENST00000370110 J3QQQ9 107 aa11.87□□□□□ -0.51
NPM3-201ENST00000370110 LINC00158P58513 81 aa11.87□□□□□ -0.51
NPM3-201ENST00000370110 FAM19A5Q7Z5A7 132 aaPredicted RBP11.87□□□□□ -0.51
NPM3-201ENST00000370110 C5orf52A6NGY3 159 aa11.86□□□□□ -0.51
NPM3-201ENST00000370110 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
NPM3-201ENST00000370110 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
NPM3-201ENST00000370110 PLA2G2DQ9UNK4 145 aa11.86□□□□□ -0.51
NPM3-201ENST00000370110 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms