RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 F8VRH5 84 aa10.11□□□□□ -0.79
PRPF38B-202ENST00000370022 F8WDY8 70 aa10.11□□□□□ -0.79
PRPF38B-202ENST00000370022 H3BRM9 83 aa10.11□□□□□ -0.79
PRPF38B-202ENST00000370022 SPAG11BQ08648 103 aa10.11□□□□□ -0.79
PRPF38B-202ENST00000370022 FUSP35637 526 aaKnown RBP eCLIP10.1□□□□□ -0.79
PRPF38B-202ENST00000370022 C2orf48Q96LS8 159 aa10.1□□□□□ -0.79
PRPF38B-202ENST00000370022 VAMP8Q9BV40 100 aa10.1□□□□□ -0.79
PRPF38B-202ENST00000370022 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
PRPF38B-202ENST00000370022 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
PRPF38B-202ENST00000370022 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
PRPF38B-202ENST00000370022 H0Y8G0 127 aa10.09□□□□□ -0.79
PRPF38B-202ENST00000370022 SLPIP03973 132 aa10.09□□□□□ -0.79
PRPF38B-202ENST00000370022 ODF1Q14990 250 aa10.09□□□□□ -0.79
PRPF38B-202ENST00000370022 C11orf86A6NJI1 115 aa10.08□□□□□ -0.8
PRPF38B-202ENST00000370022 SMIM1B2RUZ4 78 aa10.08□□□□□ -0.8
PRPF38B-202ENST00000370022 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
PRPF38B-202ENST00000370022 PRSS2P07478 247 aa10.07□□□□□ -0.8
PRPF38B-202ENST00000370022 SYCNQ0VAF6 134 aa10.07□□□□□ -0.8
PRPF38B-202ENST00000370022 Q8IZM0 81 aa10.07□□□□□ -0.8
PRPF38B-202ENST00000370022 CAMK2N2Q96S95 79 aa10.07□□□□□ -0.8
PRPF38B-202ENST00000370022 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 PLNP26678 52 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 PKIGQ9Y2B9 76 aa10.06□□□□□ -0.8
PRPF38B-202ENST00000370022 BATFQ16520 125 aa10.05□□□□□ -0.8
PRPF38B-202ENST00000370022 STPG4Q8N801 248 aa10.05□□□□□ -0.8
PRPF38B-202ENST00000370022 PKHD1P08F94 4074 aa10.05□□□□□ -0.8
PRPF38B-202ENST00000370022 NDUFA1O15239 70 aa10.05□□□□□ -0.8
PRPF38B-202ENST00000370022 C6orf226Q5I0X4 101 aa10.05□□□□□ -0.8
PRPF38B-202ENST00000370022 A0A1B0GV72 72 aa10.04□□□□□ -0.8
PRPF38B-202ENST00000370022 SPINK8P0C7L1 97 aa10.04□□□□□ -0.8
PRPF38B-202ENST00000370022 CXCL5P42830 114 aa10.04□□□□□ -0.8
PRPF38B-202ENST00000370022 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
PRPF38B-202ENST00000370022 TOMM7Q9P0U1 55 aa10.04□□□□□ -0.8
PRPF38B-202ENST00000370022 DPM2O94777 84 aa10.03□□□□□ -0.8
PRPF38B-202ENST00000370022 CKS1BP61024 79 aa10.03□□□□□ -0.8
PRPF38B-202ENST00000370022 LINC01620Q4KN68 170 aa10.03□□□□□ -0.8
PRPF38B-202ENST00000370022 Q6ZRU5 148 aa10.03□□□□□ -0.8
PRPF38B-202ENST00000370022 COX7B2Q8TF08 81 aa10.03□□□□□ -0.8
PRPF38B-202ENST00000370022 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
PRPF38B-202ENST00000370022 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
PRPF38B-202ENST00000370022 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
PRPF38B-202ENST00000370022 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 IGKCP01834 107 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 SDIM1Q6ZPB5 146 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 KRTDAPP60985 99 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 LINC01545Q5VT33 79 aa10.01□□□□□ -0.81
PRPF38B-202ENST00000370022 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
PRPF38B-202ENST00000370022 Q6ZSA8 131 aa10□□□□□ -0.81
PRPF38B-202ENST00000370022 PMCHL2Q9BQD1 86 aa10□□□□□ -0.81
PRPF38B-202ENST00000370022 DYNC1H1Q14204 4646 aaKnown RBP9.99□□□□□ -0.81
PRPF38B-202ENST00000370022 HERC2O95714 4834 aa9.99□□□□□ -0.81
PRPF38B-202ENST00000370022 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
PRPF38B-202ENST00000370022 C2orf82Q6UX34 121 aa9.99□□□□□ -0.81
PRPF38B-202ENST00000370022 PAM16Q9Y3D7 125 aa9.99□□□□□ -0.81
PRPF38B-202ENST00000370022 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
PRPF38B-202ENST00000370022 SFTA2Q6UW10 78 aa9.98□□□□□ -0.81
PRPF38B-202ENST00000370022 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
PRPF38B-202ENST00000370022 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
PRPF38B-202ENST00000370022 HERVK_113P61574 105 aa9.97□□□□□ -0.81
PRPF38B-202ENST00000370022 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
PRPF38B-202ENST00000370022 VAMP3Q15836 100 aa9.97□□□□□ -0.81
PRPF38B-202ENST00000370022 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
PRPF38B-202ENST00000370022 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.81
PRPF38B-202ENST00000370022 TLX1NBP0CAT3 122 aa9.96□□□□□ -0.82
PRPF38B-202ENST00000370022 SPATA45Q537H7 98 aa9.96□□□□□ -0.82
PRPF38B-202ENST00000370022 CIRBPQ14011 172 aaKnown RBP9.95□□□□□ -0.82
PRPF38B-202ENST00000370022 FAM30AQ9NZY2 134 aa9.95□□□□□ -0.82
PRPF38B-202ENST00000370022 PLEKHB2Q96CS7 222 aa9.93□□□□□ -0.82
PRPF38B-202ENST00000370022 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 LEPROTO15243 131 aa9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 A0A096LNI7 61 aa9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 XGP55808 180 aa9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
PRPF38B-202ENST00000370022 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
PRPF38B-202ENST00000370022 E9PLD3 99 aa9.91□□□□□ -0.82
PRPF38B-202ENST00000370022 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
PRPF38B-202ENST00000370022 CHTF8P0CG12 524 aa9.9□□□□□ -0.82
PRPF38B-202ENST00000370022 C9orf116Q5BN46 136 aaPredicted RBP9.9□□□□□ -0.82
PRPF38B-202ENST00000370022 Q6ZRP5 223 aa9.9□□□□□ -0.82
PRPF38B-202ENST00000370022 DPH3Q96FX2 82 aa9.9□□□□□ -0.82
PRPF38B-202ENST00000370022 PANO1I0J062 215 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 J3QQQ9 107 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 NMUP48645 174 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 HERV-K104P63124 156 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 COX17Q14061 63 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 CIRBP-AS1Q8TBR5 109 aa9.89□□□□□ -0.83
PRPF38B-202ENST00000370022 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 HINT1P49773 126 aaPredicted RBP9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 KRTAP17-1Q9BYP8 105 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms