RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 Q9HAA7 133 aa9.88□□□□□ -0.83
CD48-201ENST00000368045 A0A087WYN8 130 aa9.87□□□□□ -0.83
CD48-201ENST00000368045 COX17Q14061 63 aa9.87□□□□□ -0.83
CD48-201ENST00000368045 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
CD48-201ENST00000368045 NF1P21359 2839 aa9.87□□□□□ -0.83
CD48-201ENST00000368045 PDZD2O15018 2839 aa9.86□□□□□ -0.83
CD48-201ENST00000368045 A0A1B0GX51 115 aa9.86□□□□□ -0.83
CD48-201ENST00000368045 NDUFC2O95298 119 aa9.86□□□□□ -0.83
CD48-201ENST00000368045 APOC4P55056 127 aa9.86□□□□□ -0.83
CD48-201ENST00000368045 OR13C6PQ8NH95 151 aa9.86□□□□□ -0.83
CD48-201ENST00000368045 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
CD48-201ENST00000368045 SMCR5Q8TEV8 140 aa9.85□□□□□ -0.83
CD48-201ENST00000368045 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
CD48-201ENST00000368045 C11orf68Q9H3H3 251 aaKnown RBP9.84□□□□□ -0.83
CD48-201ENST00000368045 IGHV4-28A0A0C4DH34 117 aa9.83□□□□□ -0.84
CD48-201ENST00000368045 KIAA0087Q14695 138 aa9.83□□□□□ -0.84
CD48-201ENST00000368045 LECT2O14960 151 aa9.83□□□□□ -0.84
CD48-201ENST00000368045 GAGE2AQ6NT46 116 aa9.83□□□□□ -0.84
CD48-201ENST00000368045 LINC00269Q8N2A0 174 aa9.83□□□□□ -0.84
CD48-201ENST00000368045 CHCHD10Q8WYQ3 142 aaPredicted RBP9.83□□□□□ -0.84
CD48-201ENST00000368045 SETD2Q9BYW2 2564 aaPredicted RBP9.82□□□□□ -0.84
CD48-201ENST00000368045 ATP5G1P05496 136 aa9.82□□□□□ -0.84
CD48-201ENST00000368045 DAD1P61803 113 aa9.82□□□□□ -0.84
CD48-201ENST00000368045 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
CD48-201ENST00000368045 MUC7Q8TAX7 377 aa9.82□□□□□ -0.84
CD48-201ENST00000368045 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
CD48-201ENST00000368045 A0A096LPF7 62 aa9.81□□□□□ -0.84
CD48-201ENST00000368045 CCDC179H3BU77 68 aa9.81□□□□□ -0.84
CD48-201ENST00000368045 B5MCH6 92 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 MIFP14174 115 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 REG3AQ06141 175 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 SMR3AQ99954 134 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 ORMDL1Q9P0S3 153 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 ACANP16112 2415 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 MTORP42345 2549 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 ANGP03950 147 aaKnown RBP9.8□□□□□ -0.84
CD48-201ENST00000368045 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
CD48-201ENST00000368045 NBPF19A0A087WUL8 3843 aa9.8□□□□□ -0.84
CD48-201ENST00000368045 TMEM126AQ9H061 195 aa9.79□□□□□ -0.84
CD48-201ENST00000368045 FAM236AA0A1B0GUQ0 79 aa9.78□□□□□ -0.84
CD48-201ENST00000368045 FAM236BA0A1B0GV22 79 aa9.78□□□□□ -0.84
CD48-201ENST00000368045 TENM4Q6N022 2769 aa9.78□□□□□ -0.84
CD48-201ENST00000368045 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.84
CD48-201ENST00000368045 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
CD48-201ENST00000368045 Q8NAQ8 132 aa9.78□□□□□ -0.84
CD48-201ENST00000368045 HIVEP2P31629 2446 aa9.77□□□□□ -0.85
CD48-201ENST00000368045 LELP1Q5T871 98 aa9.77□□□□□ -0.85
CD48-201ENST00000368045 C14orf132Q9NPU4 83 aa9.77□□□□□ -0.85
CD48-201ENST00000368045 SPART-AS1P0CW21 52 aa9.76□□□□□ -0.85
CD48-201ENST00000368045 JMJD7-PLA2G4BH0Y9G9 81 aa9.75□□□□□ -0.85
CD48-201ENST00000368045 DEFB4AO15263 64 aa9.75□□□□□ -0.85
CD48-201ENST00000368045 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
CD48-201ENST00000368045 Q8N814 137 aa9.75□□□□□ -0.85
CD48-201ENST00000368045 SPATA3Q8NHX4 192 aa9.75□□□□□ -0.85
CD48-201ENST00000368045 SS18L2Q9UHA2 77 aa9.75□□□□□ -0.85
CD48-201ENST00000368045 Q6JHZ5 121 aa9.74□□□□□ -0.85
CD48-201ENST00000368045 CUBNO60494 3623 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 IGLV10-54A0A075B6I4 117 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 TMEM256-PLSCR3K7ERE1 68 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 CELA1Q9UNI1 258 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 NCR3O14931 201 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 SLPIP03973 132 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 IGHV4-30-4P0DP06 118 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 SPAG11BQ08648 103 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 PRR34Q9NV39 138 aa9.73□□□□□ -0.85
CD48-201ENST00000368045 CCKP06307 115 aa9.72□□□□□ -0.85
CD48-201ENST00000368045 PRR3P79522 188 aaKnown RBP9.72□□□□□ -0.85
CD48-201ENST00000368045 WIPF1O43516 503 aa9.71□□□□□ -0.85
CD48-201ENST00000368045 Q8N3U1 123 aa9.71□□□□□ -0.85
CD48-201ENST00000368045 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
CD48-201ENST00000368045 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
CD48-201ENST00000368045 WFDC9Q8NEX5 89 aa9.7□□□□□ -0.86
CD48-201ENST00000368045 LINC00846Q9NV44 126 aa9.7□□□□□ -0.86
CD48-201ENST00000368045 INAFM1C9JVW0 142 aa9.7□□□□□ -0.86
CD48-201ENST00000368045 C9orf116Q5BN46 136 aaPredicted RBP9.7□□□□□ -0.86
CD48-201ENST00000368045 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
CD48-201ENST00000368045 ITPR2Q14571 2701 aa9.69□□□□□ -0.86
CD48-201ENST00000368045 FN1P02751 2386 aaKnown RBP9.69□□□□□ -0.86
CD48-201ENST00000368045 ATOX1O00244 68 aa9.68□□□□□ -0.86
CD48-201ENST00000368045 UQCRQO14949 82 aa9.68□□□□□ -0.86
CD48-201ENST00000368045 UNQ6190/PRO20217Q6UXQ8 127 aa9.68□□□□□ -0.86
CD48-201ENST00000368045 C3orf22Q8N5N4 141 aa9.68□□□□□ -0.86
CD48-201ENST00000368045 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
CD48-201ENST00000368045 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
CD48-201ENST00000368045 CYSRT1A8MQ03 144 aa9.67□□□□□ -0.86
CD48-201ENST00000368045 H3BQ85 93 aa9.67□□□□□ -0.86
CD48-201ENST00000368045 HTN3P15516 51 aa9.67□□□□□ -0.86
CD48-201ENST00000368045 Q8NDZ9 215 aa9.67□□□□□ -0.86
CD48-201ENST00000368045 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
CD48-201ENST00000368045 ATP5EP2Q5VTU8 51 aa9.66□□□□□ -0.86
CD48-201ENST00000368045 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
CD48-201ENST00000368045 IGLV6-57P01721 117 aa9.65□□□□□ -0.86
CD48-201ENST00000368045 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
CD48-201ENST00000368045 C6orf223Q8N319 242 aa9.65□□□□□ -0.86
CD48-201ENST00000368045 LINC00526Q96FQ7 95 aa9.65□□□□□ -0.86
CD48-201ENST00000368045 H3BNG1 76 aa9.65□□□□□ -0.87
CD48-201ENST00000368045 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms