RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 Q8N3U1 123 aa11.1□□□□□ -0.63
NUCKS1-201ENST00000367142 FAM229AH3BQW9 127 aa11.09□□□□□ -0.63
NUCKS1-201ENST00000367142 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
NUCKS1-201ENST00000367142 IGKV2-30P06310 120 aa11.09□□□□□ -0.63
NUCKS1-201ENST00000367142 C7orf65Q6ZTY9 151 aa11.09□□□□□ -0.63
NUCKS1-201ENST00000367142 SOSTDC1Q6X4U4 206 aa11.09□□□□□ -0.63
NUCKS1-201ENST00000367142 A0A087WVE0 104 aa11.08□□□□□ -0.64
NUCKS1-201ENST00000367142 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
NUCKS1-201ENST00000367142 Q6ZSN1 163 aa11.07□□□□□ -0.64
NUCKS1-201ENST00000367142 PMAIP1Q13794 54 aa11.07□□□□□ -0.64
NUCKS1-201ENST00000367142 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
NUCKS1-201ENST00000367142 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
NUCKS1-201ENST00000367142 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
NUCKS1-201ENST00000367142 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
NUCKS1-201ENST00000367142 CRYGAP11844 174 aa11.04□□□□□ -0.64
NUCKS1-201ENST00000367142 A0A1W2PPR1 153 aa11.02□□□□□ -0.65
NUCKS1-201ENST00000367142 C1orf64Q8NEQ6 169 aa11.02□□□□□ -0.65
NUCKS1-201ENST00000367142 ANKHD1Q8IWZ3 2542 aaKnown RBP11.02□□□□□ -0.65
NUCKS1-201ENST00000367142 ARHGAP21Q5T5U3 1957 aa11.01□□□□□ -0.65
NUCKS1-201ENST00000367142 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
NUCKS1-201ENST00000367142 MOBPQ13875 183 aa11□□□□□ -0.65
NUCKS1-201ENST00000367142 PSPHP1O15172 72 aa11□□□□□ -0.65
NUCKS1-201ENST00000367142 KIAA1549Q9HCM3 1950 aa10.99□□□□□ -0.65
NUCKS1-201ENST00000367142 FREM1Q5H8C1 2179 aa10.99□□□□□ -0.65
NUCKS1-201ENST00000367142 A8MTW9 85 aa10.98□□□□□ -0.65
NUCKS1-201ENST00000367142 TMEM254Q8TBM7 123 aa10.98□□□□□ -0.65
NUCKS1-201ENST00000367142 URB1-AS1Q96HZ7 61 aa10.98□□□□□ -0.65
NUCKS1-201ENST00000367142 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
NUCKS1-201ENST00000367142 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
NUCKS1-201ENST00000367142 ACACBO00763 2458 aa10.97□□□□□ -0.65
NUCKS1-201ENST00000367142 KIAA0087Q14695 138 aa10.96□□□□□ -0.65
NUCKS1-201ENST00000367142 CXCL6P80162 114 aa10.96□□□□□ -0.65
NUCKS1-201ENST00000367142 NOTCH2Q04721 2471 aa10.96□□□□□ -0.65
NUCKS1-201ENST00000367142 KIF25-AS1Q9Y6Z4 181 aa10.96□□□□□ -0.66
NUCKS1-201ENST00000367142 A0A1B0GU69 56 aa10.94□□□□□ -0.66
NUCKS1-201ENST00000367142 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
NUCKS1-201ENST00000367142 RTL8CO15255 209 aa10.94□□□□□ -0.66
NUCKS1-201ENST00000367142 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
NUCKS1-201ENST00000367142 CUL9Q8IWT3 2517 aa10.94□□□□□ -0.66
NUCKS1-201ENST00000367142 ACYP2P14621 99 aa10.93□□□□□ -0.66
NUCKS1-201ENST00000367142 SORL1Q92673 2214 aa10.93□□□□□ -0.66
NUCKS1-201ENST00000367142 J3QL48 77 aa10.92□□□□□ -0.66
NUCKS1-201ENST00000367142 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
NUCKS1-201ENST00000367142 H3BNG1 76 aa10.92□□□□□ -0.66
NUCKS1-201ENST00000367142 Q6ZRP5 223 aa10.92□□□□□ -0.66
NUCKS1-201ENST00000367142 Q8NBF4 154 aa10.92□□□□□ -0.66
NUCKS1-201ENST00000367142 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
NUCKS1-201ENST00000367142 PRR14LQ5THK1 2151 aa10.91□□□□□ -0.66
NUCKS1-201ENST00000367142 PLA2G1BP04054 148 aaKnown RBP10.91□□□□□ -0.66
NUCKS1-201ENST00000367142 SMIM29Q86T20 159 aa10.91□□□□□ -0.66
NUCKS1-201ENST00000367142 PCNX3Q9H6A9 2034 aa10.91□□□□□ -0.66
NUCKS1-201ENST00000367142 MUC22E2RYF6 1773 aaPredicted RBP10.9□□□□□ -0.66
NUCKS1-201ENST00000367142 CSPG4Q6UVK1 2322 aa10.9□□□□□ -0.67
NUCKS1-201ENST00000367142 LINC00846Q9NV44 126 aa10.9□□□□□ -0.67
NUCKS1-201ENST00000367142 CEP192Q8TEP8 1941 aa10.89□□□□□ -0.67
NUCKS1-201ENST00000367142 LINC00315P59091 139 aa10.89□□□□□ -0.67
NUCKS1-201ENST00000367142 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
NUCKS1-201ENST00000367142 PTPN13Q12923 2485 aa10.88□□□□□ -0.67
NUCKS1-201ENST00000367142 WNK1Q9H4A3 2382 aa10.88□□□□□ -0.67
NUCKS1-201ENST00000367142 LINC00310P59036 64 aa10.88□□□□□ -0.67
NUCKS1-201ENST00000367142 C10orf142B7Z368 130 aa10.88□□□□□ -0.67
NUCKS1-201ENST00000367142 LINC00313P59037 77 aa10.87□□□□□ -0.67
NUCKS1-201ENST00000367142 C6orf48Q9UBA6 75 aa10.87□□□□□ -0.67
NUCKS1-201ENST00000367142 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
NUCKS1-201ENST00000367142 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
NUCKS1-201ENST00000367142 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
NUCKS1-201ENST00000367142 ATP11AUNQ6ZP68 121 aa10.86□□□□□ -0.67
NUCKS1-201ENST00000367142 PRRC2AP48634 2157 aaKnown RBP10.86□□□□□ -0.67
NUCKS1-201ENST00000367142 BDP1A6H8Y1 2624 aa10.85□□□□□ -0.67
NUCKS1-201ENST00000367142 RAI1Q7Z5J4 1906 aaPredicted RBP10.85□□□□□ -0.67
NUCKS1-201ENST00000367142 Q9UF83 564 aa10.85□□□□□ -0.67
NUCKS1-201ENST00000367142 SPG11Q96JI7 2443 aa10.85□□□□□ -0.67
NUCKS1-201ENST00000367142 A0A1B0GW54 56 aa10.84□□□□□ -0.67
NUCKS1-201ENST00000367142 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
NUCKS1-201ENST00000367142 HIVEP3Q5T1R4 2406 aa10.84□□□□□ -0.67
NUCKS1-201ENST00000367142 SONP18583 2426 aaKnown RBP10.84□□□□□ -0.67
NUCKS1-201ENST00000367142 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
NUCKS1-201ENST00000367142 A0A096LNJ9 63 aa10.83□□□□□ -0.68
NUCKS1-201ENST00000367142 PCDH15Q96QU1 1955 aa10.83□□□□□ -0.68
NUCKS1-201ENST00000367142 IGHV3OR16-9A0A0B4J2B5 98 aa10.83□□□□□ -0.68
NUCKS1-201ENST00000367142 ELOF1P60002 83 aaKnown RBP10.82□□□□□ -0.68
NUCKS1-201ENST00000367142 EPM2AB3EWF7 344 aa10.81□□□□□ -0.68
NUCKS1-201ENST00000367142 CHTF8P0CG12 524 aa10.81□□□□□ -0.68
NUCKS1-201ENST00000367142 COL5A1P20908 1838 aaPredicted RBP10.81□□□□□ -0.68
NUCKS1-201ENST00000367142 NAV3Q8IVL0 2385 aa10.81□□□□□ -0.68
NUCKS1-201ENST00000367142 LRP4O75096 1905 aa10.8□□□□□ -0.68
NUCKS1-201ENST00000367142 SPAG11AQ6PDA7 123 aa10.8□□□□□ -0.68
NUCKS1-201ENST00000367142 TANC2Q9HCD6 1990 aa10.8□□□□□ -0.68
NUCKS1-201ENST00000367142 RPL37AP61513 92 aaKnown RBP10.79□□□□□ -0.68
NUCKS1-201ENST00000367142 Q96NJ1 140 aa10.79□□□□□ -0.68
NUCKS1-201ENST00000367142 Q6ZRX8 168 aa10.79□□□□□ -0.68
NUCKS1-201ENST00000367142 NAV2Q8IVL1 2488 aa10.79□□□□□ -0.68
NUCKS1-201ENST00000367142 H3BPC8 53 aa10.78□□□□□ -0.68
NUCKS1-201ENST00000367142 LINC00476Q8WZB0 136 aa10.78□□□□□ -0.68
NUCKS1-201ENST00000367142 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
NUCKS1-201ENST00000367142 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
NUCKS1-201ENST00000367142 ADAMTS20P59510 1910 aa10.76□□□□□ -0.69
NUCKS1-201ENST00000367142 BCE1O60756 84 aa10.76□□□□□ -0.69
NUCKS1-201ENST00000367142 LINC00588Q9Y4M8 146 aa10.76□□□□□ -0.69
NUCKS1-201ENST00000367142 EXPH5Q8NEV8 1989 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms