RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 FAM231DQ6ZW35 169 aa3.12□□□□□ -1.91
RNU4-4P-201ENST00000364588 TMEM191AQ9H0A3 160 aa3.12□□□□□ -1.91
RNU4-4P-201ENST00000364588 FAM168BA1KXE4 195 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 TMEM250H0YL14 139 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 SLC51BQ86UW2 128 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 UBE2D4Q9Y2X8 147 aa3.11□□□□□ -1.91
RNU4-4P-201ENST00000364588 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 ALKAL2Q6UX46 152 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 FAM19A5Q7Z5A7 132 aaPredicted RBP3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 LINC01551Q86U37 167 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 TSKUQ8WUA8 353 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 ORAOV1Q8WV07 137 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 DIRC1Q969H9 104 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 FAM210AQ96ND0 272 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 KIR2DL4Q99706 377 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 SMIM7Q9BQ49 75 aa3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
RNU4-4P-201ENST00000364588 C5orf52A6NGY3 159 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 ZNF727A8MUV8 499 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 H0Y9J4 135 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 NDUFA1O15239 70 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 RPL39P62891 51 aaKnown RBP3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 PRR4Q16378 134 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 MRPL51Q4U2R6 128 aaKnown RBP3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 UNQ6190/PRO20217Q6UXQ8 127 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 TCTE3Q8IZS6 198 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 OR10D4PQ8NGN7 298 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 EIF5A2Q9GZV4 153 aaKnown RBP3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 OSTCQ9NRP0 149 aa3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 MRPL35Q9NZE8 188 aaKnown RBP3.09□□□□□ -1.91
RNU4-4P-201ENST00000364588 IGHV3OR16-9A0A0B4J2B5 98 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 PPP1R2P9O14990 202 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 PPP1R17O96001 155 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 UBE2BP63146 152 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 FAM104AQ969W3 186 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 IMMP2LQ96T52 175 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 TIMM21Q9BVV7 248 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 V9GYV3 84 aa3.08□□□□□ -1.92
RNU4-4P-201ENST00000364588 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 M0QXV9 152 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 TCAPO15273 167 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 SRP19P09132 144 aaKnown RBP3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 CKS2P33552 79 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 UBE2D1P51668 147 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 HBBP68871 147 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 FAM104BQ5XKR9 115 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 C2orf82Q6UX34 121 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 SMIM2Q9BVW6 85 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 SMDT1Q9H4I9 107 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 NAT8BQ9UHF3 227 aa3.07□□□□□ -1.92
RNU4-4P-201ENST00000364588 TGIF2-C20orf24A0A0A6YYL0 155 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 D6R8Y8 96 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 F8WDY8 70 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 TSPAN13O95857 204 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 NPYP01303 97 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 TLX1NBP0CAT3 122 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 RPL23P62829 140 aaKnown RBP3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 KIAA0087Q14695 138 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 ADIRFQ15847 76 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 TMEM241Q24JQ0 296 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 C9orf129Q5T035 196 aaKnown RBP3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 SPANXA1Q9NS26 97 aa3.06□□□□□ -1.92
RNU4-4P-201ENST00000364588 TRBV24-1A0A075B6N3 115 aa3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 SMIM27A0A1W2PRY6 76 aa3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 LINC00862A6NCI5 91 aa3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 RPL13AP40429 203 aaKnown RBP3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 RPL32P62910 135 aaKnown RBP3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 MRPS36P82909 103 aaKnown RBP3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 FAM74A3Q4VXF1 159 aa3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 MRPL54Q6P161 138 aaKnown RBP3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 LINC00469Q8N7U9 141 aa3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 PACRGQ96M98 296 aaPredicted RBP3.05□□□□□ -1.92
RNU4-4P-201ENST00000364588 TRBV30A0A0K0K1B3 111 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 C9JQL5 133 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 NDUFC2-KCTD14E9PQ53 114 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 ZNF861PO60384 105 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 RAB5AP20339 215 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 IFI27P40305 119 aaPredicted RBP3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 PET117Q6UWS5 81 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 AKAP14Q86UN6 197 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 TOMM7Q9P0U1 55 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 NAT8Q9UHE5 227 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 MUC2Q02817 5179 aa3.04□□□□□ -1.92
RNU4-4P-201ENST00000364588 A0A0U1RQV1 116 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 LOC389332A0A1B0GUA5 103 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 A0A1B0GW15 77 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 A0A1B0GXF2 115 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 F8W036 122 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 TMEM141Q96I45 108 aa3.03□□□□□ -1.92
RNU4-4P-201ENST00000364588 PRELID3AQ96N28 172 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms