RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 LRRC9Q6ZRR7 1453 aa0.99□□□□□ -2.25
RNU6-1249P-201ENST00000363237 KIF20BQ96Q89 1820 aa0.99□□□□□ -2.25
RNU6-1249P-201ENST00000363237 GNGT1P63211 74 aa0.98□□□□□ -2.25
RNU6-1249P-201ENST00000363237 LINC00643Q86TS7 51 aa0.98□□□□□ -2.25
RNU6-1249P-201ENST00000363237 ST20Q9HBF5 79 aa0.98□□□□□ -2.25
RNU6-1249P-201ENST00000363237 PAPPAQ13219 1627 aa0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 ADIRFQ15847 76 aa0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 NMSQ5H8A3 153 aa0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 UBE2D4Q9Y2X8 147 aa0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 KDM5DQ9BY66 1539 aa0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 TULP4Q9NRJ4 1543 aa0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 RRBP1Q9P2E9 1410 aaKnown RBP0.97□□□□□ -2.25
RNU6-1249P-201ENST00000363237 JMJD1CQ15652 2540 aa0.96□□□□□ -2.26
RNU6-1249P-201ENST00000363237 TRBV7-4A0A0J9YYF1 115 aa0.96□□□□□ -2.26
RNU6-1249P-201ENST00000363237 C6orf201Q7Z4U5 140 aa0.96□□□□□ -2.26
RNU6-1249P-201ENST00000363237 ASXL3Q9C0F0 2248 aa0.96□□□□□ -2.26
RNU6-1249P-201ENST00000363237 SAMD9Q5K651 1589 aa0.96□□□□□ -2.26
RNU6-1249P-201ENST00000363237 DNAJC13O75165 2243 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 MYMXA0A1B0GTQ4 84 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 A0A1B0GU69 56 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 IQCF6A8MYZ5 107 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 PRB3Q04118 309 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 TP53AIP1Q9HCN2 124 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 KIAA0556O60303 1618 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 CFAP74Q9C0B2 1584 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 LRRC37AA6NMS7 1700 aa0.95□□□□□ -2.26
RNU6-1249P-201ENST00000363237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.94□□□□□ -2.26
RNU6-1249P-201ENST00000363237 PTPN23Q9H3S7 1636 aa0.94□□□□□ -2.26
RNU6-1249P-201ENST00000363237 WFDC2Q14508 124 aa0.94□□□□□ -2.26
RNU6-1249P-201ENST00000363237 PLGLAQ15195 96 aa0.94□□□□□ -2.26
RNU6-1249P-201ENST00000363237 SETBP1Q9Y6X0 1596 aa0.94□□□□□ -2.26
RNU6-1249P-201ENST00000363237 MAP3K1Q13233 1512 aa0.94□□□□□ -2.26
RNU6-1249P-201ENST00000363237 RGPD8O14715 1765 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 RGPD5Q99666 1765 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 ATP7BP35670 1465 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 LINC00959A0A1B0GUT2 108 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 PRO0255Q9UI72 69 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 LTN1O94822 1766 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 BIVM-ERCC5R4GMW8 1640 aa0.93□□□□□ -2.26
RNU6-1249P-201ENST00000363237 I3L2K1 104 aa0.92□□□□□ -2.26
RNU6-1249P-201ENST00000363237 ABCC1P33527 1531 aa0.92□□□□□ -2.26
RNU6-1249P-201ENST00000363237 LRRIQ1Q96JM4 1722 aa0.92□□□□□ -2.26
RNU6-1249P-201ENST00000363237 CCDC141Q6ZP82 1450 aa0.92□□□□□ -2.26
RNU6-1249P-201ENST00000363237 COL14A1Q05707 1796 aaKnown RBP0.91□□□□□ -2.26
RNU6-1249P-201ENST00000363237 OTOGLQ3ZCN5 2332 aa0.91□□□□□ -2.26
RNU6-1249P-201ENST00000363237 CEBPZOSA8MTT3 80 aa0.91□□□□□ -2.26
RNU6-1249P-201ENST00000363237 IGLC3P0DOY3 106 aa0.91□□□□□ -2.26
RNU6-1249P-201ENST00000363237 QSER1Q2KHR3 1735 aa0.91□□□□□ -2.26
RNU6-1249P-201ENST00000363237 AHCTF1Q8WYP5 2266 aa0.9□□□□□ -2.26
RNU6-1249P-201ENST00000363237 A0A1B0GUT8 65 aa0.9□□□□□ -2.27
RNU6-1249P-201ENST00000363237 FAM208BQ5VWN6 2430 aa0.9□□□□□ -2.27
RNU6-1249P-201ENST00000363237 ZNF462Q96JM2 2506 aa0.9□□□□□ -2.27
RNU6-1249P-201ENST00000363237 RGPD1P0DJD0 1748 aa0.89□□□□□ -2.27
RNU6-1249P-201ENST00000363237 PPRC1Q5VV67 1664 aaKnown RBP0.89□□□□□ -2.27
RNU6-1249P-201ENST00000363237 IGLC2P0DOY2 106 aa0.89□□□□□ -2.27
RNU6-1249P-201ENST00000363237 Q8IZM0 81 aa0.89□□□□□ -2.27
RNU6-1249P-201ENST00000363237 DEFB123Q8N688 67 aa0.89□□□□□ -2.27
RNU6-1249P-201ENST00000363237 NKTRP30414 1462 aaKnown RBP0.88□□□□□ -2.27
RNU6-1249P-201ENST00000363237 BVES-AS1Q5T3Y7 98 aa0.88□□□□□ -2.27
RNU6-1249P-201ENST00000363237 SLIT1O75093 1534 aa0.88□□□□□ -2.27
RNU6-1249P-201ENST00000363237 ANKARQ7Z5J8 1434 aa0.88□□□□□ -2.27
RNU6-1249P-201ENST00000363237 RGPD2P0DJD1 1756 aa0.88□□□□□ -2.27
RNU6-1249P-201ENST00000363237 ABCA8O94911 1581 aa0.87□□□□□ -2.27
RNU6-1249P-201ENST00000363237 PIK3C2BO00750 1634 aa0.87□□□□□ -2.27
RNU6-1249P-201ENST00000363237 H3BUT2 72 aa0.87□□□□□ -2.27
RNU6-1249P-201ENST00000363237 KRTAP4-1Q9BYQ7 146 aa0.87□□□□□ -2.27
RNU6-1249P-201ENST00000363237 URB2Q14146 1524 aaKnown RBP0.87□□□□□ -2.27
RNU6-1249P-201ENST00000363237 UBR3Q6ZT12 1888 aa0.86□□□□□ -2.27
RNU6-1249P-201ENST00000363237 SCN11AQ9UI33 1791 aa0.86□□□□□ -2.27
RNU6-1249P-201ENST00000363237 LRRC7Q96NW7 1537 aa0.86□□□□□ -2.27
RNU6-1249P-201ENST00000363237 POLR1AO95602 1720 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1249P-201ENST00000363237 TIAM2Q8IVF5 1701 aa0.86□□□□□ -2.27
RNU6-1249P-201ENST00000363237 NCOA2Q15596 1464 aa0.86□□□□□ -2.27
RNU6-1249P-201ENST00000363237 DEFB112Q30KQ8 113 aa0.85□□□□□ -2.27
RNU6-1249P-201ENST00000363237 USMG5Q96IX5 58 aa0.85□□□□□ -2.27
RNU6-1249P-201ENST00000363237 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.27
RNU6-1249P-201ENST00000363237 FXYD6-FXYD2A0A087WZ82 144 aa0.84□□□□□ -2.27
RNU6-1249P-201ENST00000363237 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
RNU6-1249P-201ENST00000363237 MAGI3Q5TCQ9 1506 aa0.84□□□□□ -2.28
RNU6-1249P-201ENST00000363237 TSC2P49815 1807 aa0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 K7EQZ3 153 aa0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 DEFB121Q5J5C9 76 aa0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 ATP5EP2Q5VTU8 51 aa0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 CCDC88BA6NC98 1476 aa0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 FMN2Q9NZ56 1722 aa0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 CEP170BQ9Y4F5 1589 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1249P-201ENST00000363237 CACNA1HO95180 2353 aa0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 MYO5CQ9NQX4 1742 aa0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 NDUFB1O75438 58 aa0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 COX6B1P14854 86 aa0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 CRCT1Q9UGL9 99 aa0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 BCORQ6W2J9 1755 aa0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1249P-201ENST00000363237 ARFGEF2Q9Y6D5 1785 aa0.81□□□□□ -2.28
RNU6-1249P-201ENST00000363237 Q5VSD8 79 aa0.81□□□□□ -2.28
RNU6-1249P-201ENST00000363237 SPINK6Q6UWN8 80 aa0.81□□□□□ -2.28
RNU6-1249P-201ENST00000363237 C18orf32Q8TCD1 76 aa0.81□□□□□ -2.28
RNU6-1249P-201ENST00000363237 ZNF831Q5JPB2 1677 aa0.81□□□□□ -2.28
RNU6-1249P-201ENST00000363237 CFAP43Q8NDM7 1665 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms