RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 HAMPP81172 84 aa11.52□□□□□ -0.57
CLK2-202ENST00000361168 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
CLK2-202ENST00000361168 CARD19Q96LW7 228 aa11.52□□□□□ -0.57
CLK2-202ENST00000361168 PANO1I0J062 215 aa11.51□□□□□ -0.57
CLK2-202ENST00000361168 PLNP26678 52 aa11.51□□□□□ -0.57
CLK2-202ENST00000361168 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
CLK2-202ENST00000361168 Q8IZM0 81 aa11.51□□□□□ -0.57
CLK2-202ENST00000361168 ATOH7Q8N100 152 aa11.51□□□□□ -0.57
CLK2-202ENST00000361168 COX7B2Q8TF08 81 aa11.51□□□□□ -0.57
CLK2-202ENST00000361168 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
CLK2-202ENST00000361168 PRSS2P07478 247 aa11.5□□□□□ -0.57
CLK2-202ENST00000361168 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
CLK2-202ENST00000361168 C6orf48Q9UBA6 75 aa11.5□□□□□ -0.57
CLK2-202ENST00000361168 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
CLK2-202ENST00000361168 STPG4Q8N801 248 aa11.49□□□□□ -0.57
CLK2-202ENST00000361168 HSPG2P98160 4391 aa11.49□□□□□ -0.57
CLK2-202ENST00000361168 CHTF8P0CG12 524 aa11.48□□□□□ -0.57
CLK2-202ENST00000361168 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
CLK2-202ENST00000361168 CKS1BP61024 79 aa11.48□□□□□ -0.57
CLK2-202ENST00000361168 NDUFA1O15239 70 aa11.47□□□□□ -0.57
CLK2-202ENST00000361168 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
CLK2-202ENST00000361168 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
CLK2-202ENST00000361168 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
CLK2-202ENST00000361168 FAT1Q14517 4588 aa11.44□□□□□ -0.58
CLK2-202ENST00000361168 A0A096LNI7 61 aa11.44□□□□□ -0.58
CLK2-202ENST00000361168 RYR1P21817 5038 aa11.44□□□□□ -0.58
CLK2-202ENST00000361168 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
CLK2-202ENST00000361168 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
CLK2-202ENST00000361168 Q6ZRP5 223 aa11.43□□□□□ -0.58
CLK2-202ENST00000361168 Q6ZSA8 131 aa11.43□□□□□ -0.58
CLK2-202ENST00000361168 XGP55808 180 aa11.42□□□□□ -0.58
CLK2-202ENST00000361168 C20orf202A1L168 122 aa11.41□□□□□ -0.58
CLK2-202ENST00000361168 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
CLK2-202ENST00000361168 TTTY13Q9BZ97 58 aa11.41□□□□□ -0.58
CLK2-202ENST00000361168 TRBV30A0A0K0K1B3 111 aa11.4□□□□□ -0.58
CLK2-202ENST00000361168 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
CLK2-202ENST00000361168 E9PLD3 99 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 F8WDY8 70 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 J3QQQ9 107 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 LEPROTO15243 131 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 SCGB1D1O95968 90 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 CXCL5P42830 114 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 RNF151Q2KHN1 245 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 ANKRD39Q53RE8 183 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
CLK2-202ENST00000361168 HERVK_113P61574 105 aa11.38□□□□□ -0.59
CLK2-202ENST00000361168 KRTAP17-1Q9BYP8 105 aa11.38□□□□□ -0.59
CLK2-202ENST00000361168 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
CLK2-202ENST00000361168 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 PFN2P35080 140 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 SCXQ7RTU7 201 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 A0A0U1RRA0 63 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 PTTG1IPP53801 180 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 CIRBP-AS1Q8TBR5 109 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
CLK2-202ENST00000361168 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
CLK2-202ENST00000361168 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
CLK2-202ENST00000361168 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
CLK2-202ENST00000361168 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
CLK2-202ENST00000361168 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
CLK2-202ENST00000361168 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
CLK2-202ENST00000361168 A0A087WYN8 130 aa11.34□□□□□ -0.59
CLK2-202ENST00000361168 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
CLK2-202ENST00000361168 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
CLK2-202ENST00000361168 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
CLK2-202ENST00000361168 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
CLK2-202ENST00000361168 A0A1W2PNN7 141 aa11.33□□□□□ -0.6
CLK2-202ENST00000361168 NMUP48645 174 aa11.33□□□□□ -0.6
CLK2-202ENST00000361168 SMR3BP02814 79 aaPredicted RBP11.32□□□□□ -0.6
CLK2-202ENST00000361168 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
CLK2-202ENST00000361168 KRTAP7-1Q8IUC3 87 aa11.32□□□□□ -0.6
CLK2-202ENST00000361168 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
CLK2-202ENST00000361168 VPS13BQ7Z7G8 4022 aa11.32□□□□□ -0.6
CLK2-202ENST00000361168 CDK2AP2O75956 126 aa11.31□□□□□ -0.6
CLK2-202ENST00000361168 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
CLK2-202ENST00000361168 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
CLK2-202ENST00000361168 TP73-AS1Q9UF72 201 aa11.31□□□□□ -0.6
CLK2-202ENST00000361168 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
CLK2-202ENST00000361168 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
CLK2-202ENST00000361168 DAND5Q8N907 189 aa11.3□□□□□ -0.6
CLK2-202ENST00000361168 AKR1D1P51857 326 aa11.29□□□□□ -0.6
CLK2-202ENST00000361168 LINC00158P58513 81 aa11.29□□□□□ -0.6
CLK2-202ENST00000361168 HERC2O95714 4834 aa11.28□□□□□ -0.6
CLK2-202ENST00000361168 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
CLK2-202ENST00000361168 A0A0J9YXY3 114 aa11.27□□□□□ -0.6
CLK2-202ENST00000361168 ZNF815PA8K554 130 aa11.27□□□□□ -0.6
CLK2-202ENST00000361168 SFTA2Q6UW10 78 aa11.27□□□□□ -0.6
CLK2-202ENST00000361168 HERV-K104P63124 156 aa11.27□□□□□ -0.61
CLK2-202ENST00000361168 SERTAD4-AS1Q5TG53 156 aa11.27□□□□□ -0.61
CLK2-202ENST00000361168 Q8NDZ9 215 aa11.27□□□□□ -0.61
CLK2-202ENST00000361168 SND1-IT1Q9HBX3 110 aa11.27□□□□□ -0.61
CLK2-202ENST00000361168 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.61
CLK2-202ENST00000361168 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
CLK2-202ENST00000361168 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
CLK2-202ENST00000361168 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
CLK2-202ENST00000361168 COX17Q14061 63 aa11.25□□□□□ -0.61
CLK2-202ENST00000361168 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
CLK2-202ENST00000361168 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
CLK2-202ENST00000361168 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms