RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 CXCL5P42830 114 aa12.29□□□□□ -0.44
HLA-DRB1-201ENST00000360004 RNF151Q2KHN1 245 aa12.29□□□□□ -0.44
HLA-DRB1-201ENST00000360004 SCXQ7RTU7 201 aa12.29□□□□□ -0.44
HLA-DRB1-201ENST00000360004 LINC00474Q9P2X8 69 aa12.29□□□□□ -0.44
HLA-DRB1-201ENST00000360004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.29□□□□□ -0.44
HLA-DRB1-201ENST00000360004 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
HLA-DRB1-201ENST00000360004 A0A096LNI7 61 aa12.27□□□□□ -0.45
HLA-DRB1-201ENST00000360004 TRBV30A0A0K0K1B3 111 aa12.27□□□□□ -0.45
HLA-DRB1-201ENST00000360004 SMR3BP02814 79 aaPredicted RBP12.27□□□□□ -0.45
HLA-DRB1-201ENST00000360004 C6orf48Q9UBA6 75 aa12.27□□□□□ -0.45
HLA-DRB1-201ENST00000360004 S100A6P06703 90 aa12.26□□□□□ -0.45
HLA-DRB1-201ENST00000360004 ODF1Q14990 250 aa12.26□□□□□ -0.45
HLA-DRB1-201ENST00000360004 COA6Q5JTJ3 125 aaKnown RBP12.26□□□□□ -0.45
HLA-DRB1-201ENST00000360004 CIRBP-AS1Q8TBR5 109 aa12.26□□□□□ -0.45
HLA-DRB1-201ENST00000360004 KIAA1109Q2LD37 5005 aa12.26□□□□□ -0.45
HLA-DRB1-201ENST00000360004 PLNP26678 52 aa12.25□□□□□ -0.45
HLA-DRB1-201ENST00000360004 SPACA4Q8TDM5 124 aa12.24□□□□□ -0.45
HLA-DRB1-201ENST00000360004 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
HLA-DRB1-201ENST00000360004 PANO1I0J062 215 aa12.23□□□□□ -0.45
HLA-DRB1-201ENST00000360004 DPM2O94777 84 aa12.23□□□□□ -0.45
HLA-DRB1-201ENST00000360004 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
HLA-DRB1-201ENST00000360004 STPG4Q8N801 248 aa12.23□□□□□ -0.45
HLA-DRB1-201ENST00000360004 PMCHL2Q9BQD1 86 aa12.23□□□□□ -0.45
HLA-DRB1-201ENST00000360004 A0A087WYN8 130 aa12.22□□□□□ -0.45
HLA-DRB1-201ENST00000360004 S100A2P29034 98 aa12.22□□□□□ -0.45
HLA-DRB1-201ENST00000360004 GAGE2EQ4V326 116 aa12.22□□□□□ -0.45
HLA-DRB1-201ENST00000360004 GAGE2DQ9UEU5 116 aa12.22□□□□□ -0.45
HLA-DRB1-201ENST00000360004 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 IGKCP01834 107 aa12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 HERVK_113P61574 105 aa12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 Q8N1X5 172 aa12.21□□□□□ -0.45
HLA-DRB1-201ENST00000360004 RYR1P21817 5038 aa12.2□□□□□ -0.46
HLA-DRB1-201ENST00000360004 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
HLA-DRB1-201ENST00000360004 KRTDAPP60985 99 aa12.2□□□□□ -0.46
HLA-DRB1-201ENST00000360004 EPM2AB3EWF7 344 aa12.19□□□□□ -0.46
HLA-DRB1-201ENST00000360004 NDUFC2-KCTD14E9PQ53 114 aa12.19□□□□□ -0.46
HLA-DRB1-201ENST00000360004 LINC00528Q8N1L1 170 aa12.19□□□□□ -0.46
HLA-DRB1-201ENST00000360004 TLX1NBP0CAT3 122 aa12.18□□□□□ -0.46
HLA-DRB1-201ENST00000360004 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
HLA-DRB1-201ENST00000360004 PET117Q6UWS5 81 aa12.18□□□□□ -0.46
HLA-DRB1-201ENST00000360004 APOBP04114 4563 aaKnown RBP12.18□□□□□ -0.46
HLA-DRB1-201ENST00000360004 C20orf202A1L168 122 aa12.17□□□□□ -0.46
HLA-DRB1-201ENST00000360004 Q5VSD8 79 aa12.17□□□□□ -0.46
HLA-DRB1-201ENST00000360004 Q6ZRP5 223 aa12.17□□□□□ -0.46
HLA-DRB1-201ENST00000360004 PLAC8Q9NZF1 115 aa12.16□□□□□ -0.46
HLA-DRB1-201ENST00000360004 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.46
HLA-DRB1-201ENST00000360004 C3orf79P0CE67 100 aa12.15□□□□□ -0.46
HLA-DRB1-201ENST00000360004 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
HLA-DRB1-201ENST00000360004 ZNF625Q96I27 306 aaPredicted RBP12.14□□□□□ -0.47
HLA-DRB1-201ENST00000360004 HERC2O95714 4834 aa12.14□□□□□ -0.47
HLA-DRB1-201ENST00000360004 PFN2P35080 140 aa12.13□□□□□ -0.47
HLA-DRB1-201ENST00000360004 PLEKHB2Q96CS7 222 aa12.13□□□□□ -0.47
HLA-DRB1-201ENST00000360004 LINC01545Q5VT33 79 aa12.12□□□□□ -0.47
HLA-DRB1-201ENST00000360004 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
HLA-DRB1-201ENST00000360004 LEPROTO15243 131 aa12.11□□□□□ -0.47
HLA-DRB1-201ENST00000360004 LGALS3P17931 250 aaKnown RBP12.11□□□□□ -0.47
HLA-DRB1-201ENST00000360004 FAM19A5Q7Z5A7 132 aaPredicted RBP12.11□□□□□ -0.47
HLA-DRB1-201ENST00000360004 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
HLA-DRB1-201ENST00000360004 DNAH8Q96JB1 4490 aa12.11□□□□□ -0.47
HLA-DRB1-201ENST00000360004 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
HLA-DRB1-201ENST00000360004 SNRPEP62304 92 aaKnown RBP12.1□□□□□ -0.47
HLA-DRB1-201ENST00000360004 MEIG1Q5JSS6 88 aa12.1□□□□□ -0.47
HLA-DRB1-201ENST00000360004 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
HLA-DRB1-201ENST00000360004 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
HLA-DRB1-201ENST00000360004 HSPG2P98160 4391 aa12.09□□□□□ -0.47
HLA-DRB1-201ENST00000360004 MYMXA0A1B0GTQ4 84 aa12.09□□□□□ -0.47
HLA-DRB1-201ENST00000360004 A0A1W2PNN7 141 aa12.08□□□□□ -0.48
HLA-DRB1-201ENST00000360004 AKR1D1P51857 326 aa12.08□□□□□ -0.48
HLA-DRB1-201ENST00000360004 LINC00158P58513 81 aa12.08□□□□□ -0.48
HLA-DRB1-201ENST00000360004 HIST1H2BLQ99880 126 aa12.08□□□□□ -0.48
HLA-DRB1-201ENST00000360004 J3QQQ9 107 aa12.07□□□□□ -0.48
HLA-DRB1-201ENST00000360004 HERV-K104P63124 156 aa12.07□□□□□ -0.48
HLA-DRB1-201ENST00000360004 COX17Q14061 63 aa12.07□□□□□ -0.48
HLA-DRB1-201ENST00000360004 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
HLA-DRB1-201ENST00000360004 FAM168BA1KXE4 195 aa12.06□□□□□ -0.48
HLA-DRB1-201ENST00000360004 C9orf129Q5T035 196 aaKnown RBP12.06□□□□□ -0.48
HLA-DRB1-201ENST00000360004 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
HLA-DRB1-201ENST00000360004 M0QXV9 152 aa12.04□□□□□ -0.48
HLA-DRB1-201ENST00000360004 NMUP48645 174 aa12.04□□□□□ -0.48
HLA-DRB1-201ENST00000360004 KRTAP17-1Q9BYP8 105 aa12.04□□□□□ -0.48
HLA-DRB1-201ENST00000360004 E9PLD3 99 aa12.03□□□□□ -0.48
HLA-DRB1-201ENST00000360004 TSPEAR-AS2P59090 65 aa12.03□□□□□ -0.48
HLA-DRB1-201ENST00000360004 PHF5AQ7RTV0 110 aaKnown RBP12.03□□□□□ -0.48
HLA-DRB1-201ENST00000360004 KRTAP4-5Q9BYR2 181 aa12.03□□□□□ -0.48
HLA-DRB1-201ENST00000360004 UBE2BP63146 152 aa12.02□□□□□ -0.49
HLA-DRB1-201ENST00000360004 ATOH7Q8N100 152 aa12.02□□□□□ -0.49
HLA-DRB1-201ENST00000360004 SMIM13P0DJ93 91 aa12.01□□□□□ -0.49
HLA-DRB1-201ENST00000360004 INAFM2P0DMQ5 153 aa12.01□□□□□ -0.49
HLA-DRB1-201ENST00000360004 C5orf52A6NGY3 159 aa12□□□□□ -0.49
HLA-DRB1-201ENST00000360004 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
HLA-DRB1-201ENST00000360004 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
HLA-DRB1-201ENST00000360004 LBHQ53QV2 105 aaPredicted RBP11.99□□□□□ -0.49
HLA-DRB1-201ENST00000360004 SERTAD4-AS1Q5TG53 156 aa11.98□□□□□ -0.49
HLA-DRB1-201ENST00000360004 TMA7Q9Y2S6 64 aaKnown RBP11.98□□□□□ -0.49
HLA-DRB1-201ENST00000360004 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
HLA-DRB1-201ENST00000360004 SCGB1D1O95968 90 aa11.97□□□□□ -0.49
HLA-DRB1-201ENST00000360004 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms