RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SPAG11BQ08648 103 aa8.09□□□□□ -1.11
NIF3L1-201ENST00000359683 Q8IZM0 81 aa8.09□□□□□ -1.11
NIF3L1-201ENST00000359683 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
NIF3L1-201ENST00000359683 C2orf48Q96LS8 159 aa8.09□□□□□ -1.11
NIF3L1-201ENST00000359683 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
NIF3L1-201ENST00000359683 A0A1B0GVY2 172 aa8.08□□□□□ -1.12
NIF3L1-201ENST00000359683 F8WDY8 70 aa8.08□□□□□ -1.12
NIF3L1-201ENST00000359683 LCE3BQ5TA77 95 aa8.08□□□□□ -1.12
NIF3L1-201ENST00000359683 SCGB1D1O95968 90 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 PRSS2P07478 247 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 JOSD1Q15040 202 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 COX7B2Q8TF08 81 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 TOMM7Q9P0U1 55 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 HERVK_113P61574 105 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 STPG4Q8N801 248 aa8.07□□□□□ -1.12
NIF3L1-201ENST00000359683 PKHD1P08F94 4074 aa8.06□□□□□ -1.12
NIF3L1-201ENST00000359683 PKD1P98161 4303 aa8.06□□□□□ -1.12
NIF3L1-201ENST00000359683 KRTAP10-2P60368 255 aa8.06□□□□□ -1.12
NIF3L1-201ENST00000359683 E9PLD3 99 aa8.05□□□□□ -1.12
NIF3L1-201ENST00000359683 LEPROTO15243 131 aa8.05□□□□□ -1.12
NIF3L1-201ENST00000359683 SYCNQ0VAF6 134 aa8.05□□□□□ -1.12
NIF3L1-201ENST00000359683 CAMK2N2Q96S95 79 aa8.05□□□□□ -1.12
NIF3L1-201ENST00000359683 CDIP1Q9H305 208 aa8.05□□□□□ -1.12
NIF3L1-201ENST00000359683 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 NDUFA1O15239 70 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 CXCL5P42830 114 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 UNQ6190/PRO20217Q6UXQ8 127 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 Q6ZRU5 148 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 PLEKHB2Q96CS7 222 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
NIF3L1-201ENST00000359683 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 FUSP35637 526 aaKnown RBP eCLIP8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 CKS1BP61024 79 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 PYY3Q5JQD4 70 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 CDPF1Q6NVV7 123 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 RNF151Q2KHN1 245 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
NIF3L1-201ENST00000359683 IGKV2D-26A0A0A0MRZ7 120 aa8.02□□□□□ -1.13
NIF3L1-201ENST00000359683 J3QQQ9 107 aa8.02□□□□□ -1.13
NIF3L1-201ENST00000359683 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
NIF3L1-201ENST00000359683 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
NIF3L1-201ENST00000359683 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-201ENST00000359683 C6orf48Q9UBA6 75 aa8.02□□□□□ -1.13
NIF3L1-201ENST00000359683 TRBV30A0A0K0K1B3 111 aa8.01□□□□□ -1.13
NIF3L1-201ENST00000359683 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
NIF3L1-201ENST00000359683 HSBP1L1C9JCN9 74 aa8□□□□□ -1.13
NIF3L1-201ENST00000359683 NDUFA12Q9UI09 145 aa8□□□□□ -1.13
NIF3L1-201ENST00000359683 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
NIF3L1-201ENST00000359683 NMUP48645 174 aa7.99□□□□□ -1.13
NIF3L1-201ENST00000359683 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
NIF3L1-201ENST00000359683 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
NIF3L1-201ENST00000359683 GCSHP23434 173 aa7.98□□□□□ -1.13
NIF3L1-201ENST00000359683 HERV-K104P63124 156 aa7.98□□□□□ -1.13
NIF3L1-201ENST00000359683 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
NIF3L1-201ENST00000359683 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
NIF3L1-201ENST00000359683 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
NIF3L1-201ENST00000359683 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
NIF3L1-201ENST00000359683 LOC107984640A0A0U1RRK4 108 aa7.96□□□□□ -1.14
NIF3L1-201ENST00000359683 C16orf90A8MZG2 172 aa7.96□□□□□ -1.14
NIF3L1-201ENST00000359683 KRTAP10-1P60331 282 aa7.96□□□□□ -1.14
NIF3L1-201ENST00000359683 VAMP8Q9BV40 100 aa7.96□□□□□ -1.14
NIF3L1-201ENST00000359683 TTTY13Q9BZ97 58 aa7.96□□□□□ -1.14
NIF3L1-201ENST00000359683 NDUFC2-KCTD14E9PQ53 114 aa7.95□□□□□ -1.14
NIF3L1-201ENST00000359683 PCP2Q8IVA1 136 aa7.95□□□□□ -1.14
NIF3L1-201ENST00000359683 ERG28Q9UKR5 140 aa7.95□□□□□ -1.14
NIF3L1-201ENST00000359683 PKIGQ9Y2B9 76 aa7.95□□□□□ -1.14
NIF3L1-201ENST00000359683 PAM16Q9Y3D7 125 aa7.95□□□□□ -1.14
NIF3L1-201ENST00000359683 ZNF815PA8K554 130 aa7.94□□□□□ -1.14
NIF3L1-201ENST00000359683 COX17Q14061 63 aa7.94□□□□□ -1.14
NIF3L1-201ENST00000359683 SPATA45Q537H7 98 aa7.94□□□□□ -1.14
NIF3L1-201ENST00000359683 Q6ZRP5 223 aa7.94□□□□□ -1.14
NIF3L1-201ENST00000359683 LINC00518Q8N0U6 118 aa7.94□□□□□ -1.14
NIF3L1-201ENST00000359683 A0A0J9YXY3 114 aa7.93□□□□□ -1.14
NIF3L1-201ENST00000359683 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
NIF3L1-201ENST00000359683 RYR1P21817 5038 aa7.93□□□□□ -1.14
NIF3L1-201ENST00000359683 PFN2P35080 140 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 A0A096LNI7 61 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 SMIM6P0DI80 62 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 SMIM13P0DJ93 91 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 COX8AP10176 69 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 KRTAP9-9Q9BYP9 154 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 KRTAP9-4Q9BYQ2 154 aa7.92□□□□□ -1.14
NIF3L1-201ENST00000359683 LINC00158P58513 81 aa7.91□□□□□ -1.14
NIF3L1-201ENST00000359683 CIRBPQ14011 172 aaKnown RBP7.91□□□□□ -1.14
NIF3L1-201ENST00000359683 Q6ZSA8 131 aa7.91□□□□□ -1.14
NIF3L1-201ENST00000359683 BOD1L2Q8IYS8 172 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms