RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 CCL24O00175 119 aa6.91□□□□□ -1.3
TRAPPC2-201ENST00000359680 RNASE1P07998 156 aaKnown RBP6.91□□□□□ -1.3
TRAPPC2-201ENST00000359680 GIG44P09565 113 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC2-201ENST00000359680 FHL2Q14192 279 aa6.91□□□□□ -1.3
TRAPPC2-201ENST00000359680 Q8IZM0 81 aa6.91□□□□□ -1.3
TRAPPC2-201ENST00000359680 CR1P17927 2039 aa6.9□□□□□ -1.3
TRAPPC2-201ENST00000359680 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC2-201ENST00000359680 ENHOQ6UWT2 76 aa6.9□□□□□ -1.3
TRAPPC2-201ENST00000359680 FLNCQ14315 2725 aa6.9□□□□□ -1.31
TRAPPC2-201ENST00000359680 PLA2G2AP14555 144 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 POLQO75417 2590 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 NDUFC2O95298 119 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 UTP20O75691 2785 aaKnown RBP6.89□□□□□ -1.31
TRAPPC2-201ENST00000359680 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
TRAPPC2-201ENST00000359680 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
TRAPPC2-201ENST00000359680 OXTP01178 125 aa6.88□□□□□ -1.31
TRAPPC2-201ENST00000359680 JMJD1CQ15652 2540 aa6.88□□□□□ -1.31
TRAPPC2-201ENST00000359680 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
TRAPPC2-201ENST00000359680 TEX15Q9BXT5 2789 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 CUBNO60494 3623 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 DEFB130BP0DP73 79 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 DEFB130AP0DP74 79 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 A0A1B0GUV1 79 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 GYPEP15421 78 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 COX17Q14061 63 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 CFAP46Q8IYW2 2715 aa6.86□□□□□ -1.31
TRAPPC2-201ENST00000359680 RBM3P98179 157 aaKnown RBP6.85□□□□□ -1.31
TRAPPC2-201ENST00000359680 PKD1L2Q7Z442 2459 aa6.85□□□□□ -1.31
TRAPPC2-201ENST00000359680 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
TRAPPC2-201ENST00000359680 FBN2P35556 2912 aa6.84□□□□□ -1.31
TRAPPC2-201ENST00000359680 LINC00528Q8N1L1 170 aa6.84□□□□□ -1.31
TRAPPC2-201ENST00000359680 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
TRAPPC2-201ENST00000359680 EPG5Q9HCE0 2579 aa6.84□□□□□ -1.31
TRAPPC2-201ENST00000359680 ACACBO00763 2458 aa6.84□□□□□ -1.31
TRAPPC2-201ENST00000359680 SETXQ7Z333 2677 aaKnown RBP6.84□□□□□ -1.31
TRAPPC2-201ENST00000359680 LINC00575Q6W349 94 aa6.84□□□□□ -1.32
TRAPPC2-201ENST00000359680 CENPEQ02224 2701 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 MYO18BQ8IUG5 2567 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 FAM236DA0A1B0GTK5 79 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 FAM236CP0DP71 79 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 Q6ZQT0 140 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 A0A096LPF7 62 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 DNAJC9-AS1A6NH13 148 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 Q5XG85 94 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 CD164L2Q6UWJ8 174 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 C19orf73Q9NVV2 129 aa6.83□□□□□ -1.32
TRAPPC2-201ENST00000359680 LRRK2Q5S007 2527 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 WIPF1O43516 503 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 HAMPP81172 84 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 KIAA0087Q14695 138 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 TRAV7A0A075B6U4 112 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 FAM208BQ5VWN6 2430 aa6.82□□□□□ -1.32
TRAPPC2-201ENST00000359680 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 BCE1O60756 84 aa6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 IGLV1-51P01701 117 aa6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 CHCHD10Q8WYQ3 142 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 IGHV4-28A0A0C4DH34 117 aa6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 PTPN13Q12923 2485 aa6.81□□□□□ -1.32
TRAPPC2-201ENST00000359680 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC2-201ENST00000359680 AKAP9Q99996 3911 aa6.8□□□□□ -1.32
TRAPPC2-201ENST00000359680 NAV2Q8IVL1 2488 aa6.8□□□□□ -1.32
TRAPPC2-201ENST00000359680 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
TRAPPC2-201ENST00000359680 C6orf223Q8N319 242 aa6.8□□□□□ -1.32
TRAPPC2-201ENST00000359680 PRO0255Q9UI72 69 aa6.8□□□□□ -1.32
TRAPPC2-201ENST00000359680 SONP18583 2426 aaKnown RBP6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 Q6ZVQ6 151 aa6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 Q8NDZ9 215 aa6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 BBC3Q96PG8 261 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 NIPBLQ6KC79 2804 aaeCLIP6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 SETD2Q9BYW2 2564 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC2-201ENST00000359680 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 NF1P21359 2839 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 H7BZZ5 65 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 M0R2N4 97 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 PDE6GP18545 87 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 KRTAP10-9P60411 292 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 REG3AQ06141 175 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 Q6ZQY7 126 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 LINC00612Q8N6U2 182 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
TRAPPC2-201ENST00000359680 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.32
TRAPPC2-201ENST00000359680 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
TRAPPC2-201ENST00000359680 H3BQ85 93 aa6.77□□□□□ -1.33
TRAPPC2-201ENST00000359680 CXCL6P80162 114 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms