RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 TOMM7Q9P0U1 55 aa10.67□□□□□ -0.7
FAM3D-201ENST00000358781 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
FAM3D-201ENST00000358781 Q8IZM0 81 aa10.66□□□□□ -0.7
FAM3D-201ENST00000358781 IGLV5-45A0A087WSX0 123 aa10.65□□□□□ -0.7
FAM3D-201ENST00000358781 A0A1W2PNN7 141 aa10.65□□□□□ -0.7
FAM3D-201ENST00000358781 PDZD11Q5EBL8 140 aa10.65□□□□□ -0.7
FAM3D-201ENST00000358781 C6orf226Q5I0X4 101 aa10.65□□□□□ -0.7
FAM3D-201ENST00000358781 Q6ZRP5 223 aa10.65□□□□□ -0.7
FAM3D-201ENST00000358781 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
FAM3D-201ENST00000358781 CKS1BP61024 79 aa10.64□□□□□ -0.71
FAM3D-201ENST00000358781 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
FAM3D-201ENST00000358781 SMIM1B2RUZ4 78 aa10.63□□□□□ -0.71
FAM3D-201ENST00000358781 NDUFA6P56556 154 aa10.62□□□□□ -0.71
FAM3D-201ENST00000358781 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
FAM3D-201ENST00000358781 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
FAM3D-201ENST00000358781 NDUFC2-KCTD14E9PQ53 114 aa10.61□□□□□ -0.71
FAM3D-201ENST00000358781 J3QL48 77 aa10.61□□□□□ -0.71
FAM3D-201ENST00000358781 ATP5LO75964 103 aa10.61□□□□□ -0.71
FAM3D-201ENST00000358781 GAGE2EQ4V326 116 aa10.61□□□□□ -0.71
FAM3D-201ENST00000358781 GAGE2DQ9UEU5 116 aa10.61□□□□□ -0.71
FAM3D-201ENST00000358781 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
FAM3D-201ENST00000358781 F8VRH5 84 aa10.59□□□□□ -0.71
FAM3D-201ENST00000358781 OXTP01178 125 aa10.59□□□□□ -0.71
FAM3D-201ENST00000358781 TRGC2P03986 189 aa10.59□□□□□ -0.71
FAM3D-201ENST00000358781 SPINK8P0C7L1 97 aa10.59□□□□□ -0.71
FAM3D-201ENST00000358781 CXCL5P42830 114 aa10.59□□□□□ -0.71
FAM3D-201ENST00000358781 COX7B2Q8TF08 81 aa10.59□□□□□ -0.71
FAM3D-201ENST00000358781 FAM168BA1KXE4 195 aa10.58□□□□□ -0.71
FAM3D-201ENST00000358781 H3BRM9 83 aa10.58□□□□□ -0.71
FAM3D-201ENST00000358781 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
FAM3D-201ENST00000358781 COLCA2A8K830 154 aa10.57□□□□□ -0.72
FAM3D-201ENST00000358781 ZNF22P17026 224 aaPredicted RBP10.57□□□□□ -0.72
FAM3D-201ENST00000358781 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
FAM3D-201ENST00000358781 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
FAM3D-201ENST00000358781 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
FAM3D-201ENST00000358781 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
FAM3D-201ENST00000358781 KRTAP7-1Q8IUC3 87 aa10.55□□□□□ -0.72
FAM3D-201ENST00000358781 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
FAM3D-201ENST00000358781 HSBP1O75506 76 aa10.54□□□□□ -0.72
FAM3D-201ENST00000358781 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
FAM3D-201ENST00000358781 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
FAM3D-201ENST00000358781 PSORS1C2Q9UIG4 136 aa10.53□□□□□ -0.72
FAM3D-201ENST00000358781 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
FAM3D-201ENST00000358781 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
FAM3D-201ENST00000358781 M0QXV9 152 aa10.51□□□□□ -0.73
FAM3D-201ENST00000358781 SERF1AO75920 110 aa10.51□□□□□ -0.73
FAM3D-201ENST00000358781 LINC00310P59036 64 aa10.51□□□□□ -0.73
FAM3D-201ENST00000358781 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
FAM3D-201ENST00000358781 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
FAM3D-201ENST00000358781 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
FAM3D-201ENST00000358781 SCO1O75880 301 aa10.49□□□□□ -0.73
FAM3D-201ENST00000358781 SPINK6Q6UWN8 80 aa10.49□□□□□ -0.73
FAM3D-201ENST00000358781 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
FAM3D-201ENST00000358781 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
FAM3D-201ENST00000358781 TNXBP22105 4242 aa10.47□□□□□ -0.73
FAM3D-201ENST00000358781 C1orf137Q5JT78 98 aa10.47□□□□□ -0.73
FAM3D-201ENST00000358781 NUPR1O60356 82 aa10.46□□□□□ -0.73
FAM3D-201ENST00000358781 LEPROTL1O95214 131 aa10.46□□□□□ -0.73
FAM3D-201ENST00000358781 MT1HL1P0DM35 61 aa10.45□□□□□ -0.74
FAM3D-201ENST00000358781 UBE2BP63146 152 aa10.45□□□□□ -0.74
FAM3D-201ENST00000358781 C22orf24Q9Y442 160 aa10.45□□□□□ -0.74
FAM3D-201ENST00000358781 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
FAM3D-201ENST00000358781 ODF1Q14990 250 aa10.44□□□□□ -0.74
FAM3D-201ENST00000358781 SFTA2Q6UW10 78 aa10.43□□□□□ -0.74
FAM3D-201ENST00000358781 HSPB8Q9UJY1 196 aa10.43□□□□□ -0.74
FAM3D-201ENST00000358781 H0Y8G0 127 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 PFN2P35080 140 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 LBHQ53QV2 105 aaPredicted RBP10.42□□□□□ -0.74
FAM3D-201ENST00000358781 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
FAM3D-201ENST00000358781 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
FAM3D-201ENST00000358781 FABP4P15090 132 aa10.41□□□□□ -0.74
FAM3D-201ENST00000358781 LINC01600Q96MT4 127 aa10.41□□□□□ -0.74
FAM3D-201ENST00000358781 COX17Q14061 63 aa10.4□□□□□ -0.74
FAM3D-201ENST00000358781 MRPL55Q7Z7F7 128 aaKnown RBP10.4□□□□□ -0.74
FAM3D-201ENST00000358781 HIST1H2BKO60814 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BJP06899 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BOP23527 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BBP33778 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BDP58876 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BCP62807 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST2H2BEQ16778 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BHQ93079 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BNQ99877 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 HIST1H2BMQ99879 126 aa10.39□□□□□ -0.75
FAM3D-201ENST00000358781 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
FAM3D-201ENST00000358781 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
FAM3D-201ENST00000358781 PLNP26678 52 aa10.37□□□□□ -0.75
FAM3D-201ENST00000358781 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
FAM3D-201ENST00000358781 HMCN2Q8NDA2 5059 aa10.37□□□□□ -0.75
FAM3D-201ENST00000358781 NKAPP1Q8N9T2 125 aa10.35□□□□□ -0.75
FAM3D-201ENST00000358781 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
FAM3D-201ENST00000358781 DPM2O94777 84 aa10.34□□□□□ -0.75
FAM3D-201ENST00000358781 MAP1LC3CQ9BXW4 147 aa10.34□□□□□ -0.75
FAM3D-201ENST00000358781 GAGE10A6NGK3 116 aa10.33□□□□□ -0.76
FAM3D-201ENST00000358781 RPL37AP8A6NKH3 93 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms