RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 NDUFA1O15239 70 aa15.73■□□□□ 0.11
HMGA2-201ENST00000354636 CXCL5P42830 114 aa15.73■□□□□ 0.11
HMGA2-201ENST00000354636 PYY3Q5JQD4 70 aa15.73■□□□□ 0.11
HMGA2-201ENST00000354636 UNQ6190/PRO20217Q6UXQ8 127 aa15.73■□□□□ 0.11
HMGA2-201ENST00000354636 C10orf25Q5T742 122 aa15.72■□□□□ 0.11
HMGA2-201ENST00000354636 PLEKHB2Q96CS7 222 aa15.72■□□□□ 0.11
HMGA2-201ENST00000354636 TSPEAR-AS2P59090 65 aa15.71■□□□□ 0.11
HMGA2-201ENST00000354636 CARD19Q96LW7 228 aa15.71■□□□□ 0.11
HMGA2-201ENST00000354636 DNAH5Q8TE73 4624 aa15.71■□□□□ 0.1
HMGA2-201ENST00000354636 MAJINQ3KP22 176 aa15.7■□□□□ 0.1
HMGA2-201ENST00000354636 CDPF1Q6NVV7 123 aa15.7■□□□□ 0.1
HMGA2-201ENST00000354636 C9orf163Q8N9P6 203 aa15.7■□□□□ 0.1
HMGA2-201ENST00000354636 J3QQQ9 107 aa15.69■□□□□ 0.1
HMGA2-201ENST00000354636 ANKRD39Q53RE8 183 aa15.69■□□□□ 0.1
HMGA2-201ENST00000354636 IGKV2D-26A0A0A0MRZ7 120 aa15.68■□□□□ 0.1
HMGA2-201ENST00000354636 LOC105371267A0A1B0GV96 52 aa15.68■□□□□ 0.1
HMGA2-201ENST00000354636 ZNF625Q96I27 306 aaPredicted RBP15.68■□□□□ 0.1
HMGA2-201ENST00000354636 C6orf48Q9UBA6 75 aa15.68■□□□□ 0.1
HMGA2-201ENST00000354636 LINC01620Q4KN68 170 aa15.67■□□□□ 0.1
HMGA2-201ENST00000354636 TRBV30A0A0K0K1B3 111 aa15.66■□□□□ 0.1
HMGA2-201ENST00000354636 HSBP1L1C9JCN9 74 aa15.66■□□□□ 0.1
HMGA2-201ENST00000354636 RNF151Q2KHN1 245 aa15.66■□□□□ 0.1
HMGA2-201ENST00000354636 SFTA2Q6UW10 78 aa15.66■□□□□ 0.1
HMGA2-201ENST00000354636 PKHD1P08F94 4074 aa15.66■□□□□ 0.1
HMGA2-201ENST00000354636 LGALS3P17931 250 aaKnown RBP15.65■□□□□ 0.1
HMGA2-201ENST00000354636 NDUFA12Q9UI09 145 aa15.65■□□□□ 0.1
HMGA2-201ENST00000354636 C16orf90A8MZG2 172 aa15.64■□□□□ 0.09
HMGA2-201ENST00000354636 GCSHP23434 173 aa15.63■□□□□ 0.09
HMGA2-201ENST00000354636 NMUP48645 174 aa15.63■□□□□ 0.09
HMGA2-201ENST00000354636 C9orf116Q5BN46 136 aaPredicted RBP15.62■□□□□ 0.09
HMGA2-201ENST00000354636 MYMXA0A1B0GTQ4 84 aa15.61■□□□□ 0.09
HMGA2-201ENST00000354636 SDIM1Q6ZPB5 146 aa15.6■□□□□ 0.09
HMGA2-201ENST00000354636 HERV-K104P63124 156 aa15.59■□□□□ 0.09
HMGA2-201ENST00000354636 TTTY13Q9BZ97 58 aa15.59■□□□□ 0.09
HMGA2-201ENST00000354636 VAMP8Q9BV40 100 aa15.58■□□□□ 0.09
HMGA2-201ENST00000354636 TLX1NBP0CAT3 122 aa15.58■□□□□ 0.08
HMGA2-201ENST00000354636 PAM16Q9Y3D7 125 aa15.58■□□□□ 0.08
HMGA2-201ENST00000354636 LOC107984640A0A0U1RRK4 108 aa15.56■□□□□ 0.08
HMGA2-201ENST00000354636 PCP2Q8IVA1 136 aa15.56■□□□□ 0.08
HMGA2-201ENST00000354636 ZNF815PA8K554 130 aa15.55■□□□□ 0.08
HMGA2-201ENST00000354636 NDUFC2-KCTD14E9PQ53 114 aa15.55■□□□□ 0.08
HMGA2-201ENST00000354636 ERG28Q9UKR5 140 aa15.55■□□□□ 0.08
HMGA2-201ENST00000354636 DYNC1H1Q14204 4646 aaKnown RBP15.55■□□□□ 0.08
HMGA2-201ENST00000354636 KRTAP10-1P60331 282 aa15.54■□□□□ 0.08
HMGA2-201ENST00000354636 SPATA45Q537H7 98 aa15.54■□□□□ 0.08
HMGA2-201ENST00000354636 PKIGQ9Y2B9 76 aa15.54■□□□□ 0.08
HMGA2-201ENST00000354636 RPL18AQ02543 176 aaKnown RBP15.53■□□□□ 0.08
HMGA2-201ENST00000354636 COX17Q14061 63 aa15.53■□□□□ 0.08
HMGA2-201ENST00000354636 Q6ZRP5 223 aa15.53■□□□□ 0.08
HMGA2-201ENST00000354636 PFN2P35080 140 aa15.53■□□□□ 0.08
HMGA2-201ENST00000354636 LRP1BQ9NZR2 4599 aa15.52■□□□□ 0.08
HMGA2-201ENST00000354636 A0A0J9YXY3 114 aa15.52■□□□□ 0.07
HMGA2-201ENST00000354636 SMIM6P0DI80 62 aa15.51■□□□□ 0.07
HMGA2-201ENST00000354636 GAGE2BQ13066 116 aa15.51■□□□□ 0.07
HMGA2-201ENST00000354636 MEIG1Q5JSS6 88 aa15.51■□□□□ 0.07
HMGA2-201ENST00000354636 A0A096LNI7 61 aa15.5■□□□□ 0.07
HMGA2-201ENST00000354636 LINC00587B1AMM8 73 aa15.5■□□□□ 0.07
HMGA2-201ENST00000354636 EPPK1P58107 5090 aaKnown RBP15.5■□□□□ 0.07
HMGA2-201ENST00000354636 IGKV2-24A0A0C4DH68 120 aa15.49■□□□□ 0.07
HMGA2-201ENST00000354636 SMIM13P0DJ93 91 aa15.49■□□□□ 0.07
HMGA2-201ENST00000354636 DNAH8Q96JB1 4490 aa15.49■□□□□ 0.07
HMGA2-201ENST00000354636 COX8AP10176 69 aa15.48■□□□□ 0.07
HMGA2-201ENST00000354636 PTTG1IPP53801 180 aa15.48■□□□□ 0.07
HMGA2-201ENST00000354636 LINC00158P58513 81 aa15.48■□□□□ 0.07
HMGA2-201ENST00000354636 GAGE2EQ4V326 116 aa15.48■□□□□ 0.07
HMGA2-201ENST00000354636 DPH3Q96FX2 82 aa15.48■□□□□ 0.07
HMGA2-201ENST00000354636 GAGE2DQ9UEU5 116 aa15.48■□□□□ 0.07
HMGA2-201ENST00000354636 A0A0U1RRA0 63 aa15.47■□□□□ 0.07
HMGA2-201ENST00000354636 CHTF8P0CG12 524 aa15.47■□□□□ 0.07
HMGA2-201ENST00000354636 S100A12P80511 92 aa15.47■□□□□ 0.07
HMGA2-201ENST00000354636 PANO1I0J062 215 aa15.46■□□□□ 0.07
HMGA2-201ENST00000354636 Q6ZSA8 131 aa15.46■□□□□ 0.07
HMGA2-201ENST00000354636 BOD1L2Q8IYS8 172 aa15.46■□□□□ 0.07
HMGA2-201ENST00000354636 C14orf144Q96I85 54 aa15.46■□□□□ 0.07
HMGA2-201ENST00000354636 FAM30AQ9NZY2 134 aa15.46■□□□□ 0.07
HMGA2-201ENST00000354636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.46■□□□□ 0.07
HMGA2-201ENST00000354636 CIRBPQ14011 172 aaKnown RBP15.45■□□□□ 0.06
HMGA2-201ENST00000354636 SCGB1D4Q6XE38 83 aa15.44■□□□□ 0.06
HMGA2-201ENST00000354636 LINC00474Q9P2X8 69 aa15.44■□□□□ 0.06
HMGA2-201ENST00000354636 DLEU1O43261 78 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 TIMM17BO60830 172 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 SPACA4Q8TDM5 124 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 LITAFQ99732 161 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 MIR7-3HGQ8N6C7 128 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 XAGE1AQ9HD64 81 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 TP73-AS1Q9UF72 201 aa15.43■□□□□ 0.06
HMGA2-201ENST00000354636 C9orf129Q5T035 196 aaKnown RBP15.42■□□□□ 0.06
HMGA2-201ENST00000354636 ADAMTSL4-AS1Q5T5F5 129 aa15.42■□□□□ 0.06
HMGA2-201ENST00000354636 SND1-IT1Q9HBX3 110 aa15.42■□□□□ 0.06
HMGA2-201ENST00000354636 DAND5Q8N907 189 aa15.39■□□□□ 0.05
HMGA2-201ENST00000354636 SLC25A34Q6PIV7 304 aa15.38■□□□□ 0.05
HMGA2-201ENST00000354636 TMEM238C9JI98 176 aa15.37■□□□□ 0.05
HMGA2-201ENST00000354636 HAMPP81172 84 aa15.36■□□□□ 0.05
HMGA2-201ENST00000354636 C12orf57Q99622 126 aa15.36■□□□□ 0.05
HMGA2-201ENST00000354636 A0A087WYN8 130 aa15.35■□□□□ 0.05
HMGA2-201ENST00000354636 APOBP04114 4563 aaKnown RBP15.35■□□□□ 0.05
HMGA2-201ENST00000354636 A0A1W2PNN7 141 aa15.34■□□□□ 0.05
HMGA2-201ENST00000354636 SPANXDQ9BXN6 97 aa15.34■□□□□ 0.05
HMGA2-201ENST00000354636 SPANXCQ9NY87 97 aa15.34■□□□□ 0.05
HMGA2-201ENST00000354636 LOC107984156A0A0G2JMH3 177 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms