RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 MYCBP2O75592 4640 aa13.87□□□□□ -0.19
SNX3-202ENST00000349379 IGLC3P0DOY3 106 aa13.86□□□□□ -0.19
SNX3-202ENST00000349379 TOMM7Q9P0U1 55 aa13.86□□□□□ -0.19
SNX3-202ENST00000349379 PRSS2P07478 247 aa13.85□□□□□ -0.19
SNX3-202ENST00000349379 Q6ZRP5 223 aa13.85□□□□□ -0.19
SNX3-202ENST00000349379 PKHD1L1Q86WI1 4243 aa13.84□□□□□ -0.19
SNX3-202ENST00000349379 A0A1W2PNN7 141 aa13.84□□□□□ -0.19
SNX3-202ENST00000349379 C6orf226Q5I0X4 101 aa13.83□□□□□ -0.2
SNX3-202ENST00000349379 C7orf33Q8WU49 177 aa13.83□□□□□ -0.2
SNX3-202ENST00000349379 CXCL5P42830 114 aa13.81□□□□□ -0.2
SNX3-202ENST00000349379 HNRNPA3P51991 378 aaKnown RBP13.81□□□□□ -0.2
SNX3-202ENST00000349379 NDUFA6P56556 154 aa13.81□□□□□ -0.2
SNX3-202ENST00000349379 LINC00310P59036 64 aa13.81□□□□□ -0.2
SNX3-202ENST00000349379 CKS1BP61024 79 aa13.81□□□□□ -0.2
SNX3-202ENST00000349379 C9orf116Q5BN46 136 aaPredicted RBP13.81□□□□□ -0.2
SNX3-202ENST00000349379 BAGE3Q86Y29 109 aa13.81□□□□□ -0.2
SNX3-202ENST00000349379 HERC1Q15751 4861 aa13.8□□□□□ -0.2
SNX3-202ENST00000349379 NDUFC2-KCTD14E9PQ53 114 aa13.8□□□□□ -0.2
SNX3-202ENST00000349379 HSBP1O75506 76 aa13.79□□□□□ -0.2
SNX3-202ENST00000349379 SCO1O75880 301 aa13.79□□□□□ -0.2
SNX3-202ENST00000349379 SPINK8P0C7L1 97 aa13.79□□□□□ -0.2
SNX3-202ENST00000349379 ZNF22P17026 224 aaPredicted RBP13.79□□□□□ -0.2
SNX3-202ENST00000349379 COX7B2Q8TF08 81 aa13.79□□□□□ -0.2
SNX3-202ENST00000349379 F8VRH5 84 aa13.78□□□□□ -0.2
SNX3-202ENST00000349379 H3BRM9 83 aa13.78□□□□□ -0.2
SNX3-202ENST00000349379 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
SNX3-202ENST00000349379 IGLV5-39A0A0G2JS06 123 aa13.77□□□□□ -0.21
SNX3-202ENST00000349379 GAGE2EQ4V326 116 aa13.77□□□□□ -0.21
SNX3-202ENST00000349379 FAM19A2Q8N3H0 131 aa13.77□□□□□ -0.21
SNX3-202ENST00000349379 GAGE2DQ9UEU5 116 aa13.77□□□□□ -0.21
SNX3-202ENST00000349379 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
SNX3-202ENST00000349379 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
SNX3-202ENST00000349379 SERF1AO75920 110 aa13.76□□□□□ -0.21
SNX3-202ENST00000349379 PRR3P79522 188 aaKnown RBP13.76□□□□□ -0.21
SNX3-202ENST00000349379 KRTAP29-1A8MX34 341 aaPredicted RBP13.74□□□□□ -0.21
SNX3-202ENST00000349379 CHTOPQ9Y3Y2 248 aaKnown RBP13.74□□□□□ -0.21
SNX3-202ENST00000349379 LRP1Q07954 4544 aaKnown RBP13.74□□□□□ -0.21
SNX3-202ENST00000349379 FAM168BA1KXE4 195 aa13.73□□□□□ -0.21
SNX3-202ENST00000349379 C9orf129Q5T035 196 aaKnown RBP13.73□□□□□ -0.21
SNX3-202ENST00000349379 KRTAP7-1Q8IUC3 87 aa13.73□□□□□ -0.21
SNX3-202ENST00000349379 FAT3Q8TDW7 4589 aa13.73□□□□□ -0.21
SNX3-202ENST00000349379 NUPR1O60356 82 aa13.72□□□□□ -0.21
SNX3-202ENST00000349379 DMBT1Q9UGM3 2413 aaPredicted RBP13.72□□□□□ -0.21
SNX3-202ENST00000349379 PHF5AQ7RTV0 110 aaKnown RBP13.71□□□□□ -0.21
SNX3-202ENST00000349379 LEPROTL1O95214 131 aa13.69□□□□□ -0.22
SNX3-202ENST00000349379 TMEM170BQ5T4T1 132 aa13.68□□□□□ -0.22
SNX3-202ENST00000349379 FAM19A5Q7Z5A7 132 aaPredicted RBP13.68□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BKO60814 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 OXTP01178 125 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 ODF1Q14990 250 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
SNX3-202ENST00000349379 XAGE1AQ9HD64 81 aa13.65□□□□□ -0.22
SNX3-202ENST00000349379 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
SNX3-202ENST00000349379 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
SNX3-202ENST00000349379 HSPB8Q9UJY1 196 aa13.64□□□□□ -0.23
SNX3-202ENST00000349379 M0QXV9 152 aa13.63□□□□□ -0.23
SNX3-202ENST00000349379 KRTAP11-1Q8IUC1 163 aa13.63□□□□□ -0.23
SNX3-202ENST00000349379 SERTAD4-AS1Q5TG53 156 aa13.62□□□□□ -0.23
SNX3-202ENST00000349379 J3QL48 77 aa13.61□□□□□ -0.23
SNX3-202ENST00000349379 SRSF9Q13242 221 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX3-202ENST00000349379 SFTA2Q6UW10 78 aa13.6□□□□□ -0.23
SNX3-202ENST00000349379 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
SNX3-202ENST00000349379 FABP4P15090 132 aa13.59□□□□□ -0.23
SNX3-202ENST00000349379 H0Y8G0 127 aa13.58□□□□□ -0.24
SNX3-202ENST00000349379 SPINK6Q6UWN8 80 aa13.58□□□□□ -0.24
SNX3-202ENST00000349379 PLA2G2DQ9UNK4 145 aa13.58□□□□□ -0.24
SNX3-202ENST00000349379 ERG28Q9UKR5 140 aa13.57□□□□□ -0.24
SNX3-202ENST00000349379 C22orf24Q9Y442 160 aa13.57□□□□□ -0.24
SNX3-202ENST00000349379 COX17Q14061 63 aa13.56□□□□□ -0.24
SNX3-202ENST00000349379 C1orf137Q5JT78 98 aa13.56□□□□□ -0.24
SNX3-202ENST00000349379 TP73-AS1Q9UF72 201 aa13.56□□□□□ -0.24
SNX3-202ENST00000349379 PFN2P35080 140 aa13.55□□□□□ -0.24
SNX3-202ENST00000349379 PLNP26678 52 aa13.54□□□□□ -0.24
SNX3-202ENST00000349379 COA6Q5JTJ3 125 aaKnown RBP13.54□□□□□ -0.24
SNX3-202ENST00000349379 UBR4Q5T4S7 5183 aa13.53□□□□□ -0.24
SNX3-202ENST00000349379 IGLV5-37A0A075B6J1 123 aa13.53□□□□□ -0.24
SNX3-202ENST00000349379 S100A1P23297 94 aa13.53□□□□□ -0.24
SNX3-202ENST00000349379 UBE2BP63146 152 aa13.53□□□□□ -0.24
SNX3-202ENST00000349379 MAP1LC3CQ9BXW4 147 aa13.53□□□□□ -0.24
SNX3-202ENST00000349379 MT1HL1P0DM35 61 aa13.52□□□□□ -0.25
SNX3-202ENST00000349379 DPM2O94777 84 aa13.51□□□□□ -0.25
SNX3-202ENST00000349379 IGLV7-43P04211 117 aa13.51□□□□□ -0.25
SNX3-202ENST00000349379 LBHQ53QV2 105 aaPredicted RBP13.51□□□□□ -0.25
SNX3-202ENST00000349379 MRPL55Q7Z7F7 128 aaKnown RBP13.51□□□□□ -0.25
SNX3-202ENST00000349379 SND1-IT1Q9HBX3 110 aa13.51□□□□□ -0.25
SNX3-202ENST00000349379 PMCHL2Q9BQD1 86 aa13.5□□□□□ -0.25
SNX3-202ENST00000349379 ATP6V1G1O75348 118 aa13.48□□□□□ -0.25
SNX3-202ENST00000349379 IGKCP01834 107 aa13.48□□□□□ -0.25
SNX3-202ENST00000349379 SYS1-DBNDD2H3BUS1 97 aa13.47□□□□□ -0.25
SNX3-202ENST00000349379 TSPEAR-AS2P59090 65 aa13.47□□□□□ -0.25
SNX3-202ENST00000349379 LINC01600Q96MT4 127 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms