RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RPL36ALQ969Q0 106 aaKnown RBP13.17□□□□□ -0.3
SCARF1-202ENST00000348987 DEFB114Q30KQ6 69 aa13.16□□□□□ -0.3
SCARF1-202ENST00000348987 DYNLRB2Q8TF09 96 aa13.16□□□□□ -0.3
SCARF1-202ENST00000348987 CCL18P55774 89 aa13.15□□□□□ -0.3
SCARF1-202ENST00000348987 C4orf3Q8WVX3 66 aa13.15□□□□□ -0.3
SCARF1-202ENST00000348987 PDZD2O15018 2839 aa13.15□□□□□ -0.3
SCARF1-202ENST00000348987 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
SCARF1-202ENST00000348987 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
SCARF1-202ENST00000348987 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
SCARF1-202ENST00000348987 GHRHP01286 108 aa13.13□□□□□ -0.31
SCARF1-202ENST00000348987 SS18Q15532 418 aa13.13□□□□□ -0.31
SCARF1-202ENST00000348987 ODF3L2Q3SX64 289 aa13.12□□□□□ -0.31
SCARF1-202ENST00000348987 FASNP49327 2511 aaKnown RBP13.12□□□□□ -0.31
SCARF1-202ENST00000348987 IGKV3OR2-268A0A0C4DH90 116 aa13.12□□□□□ -0.31
SCARF1-202ENST00000348987 CCKP06307 115 aa13.11□□□□□ -0.31
SCARF1-202ENST00000348987 PFN2P35080 140 aa13.11□□□□□ -0.31
SCARF1-202ENST00000348987 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
SCARF1-202ENST00000348987 TRGV1A0A0A0MS02 117 aa13.11□□□□□ -0.31
SCARF1-202ENST00000348987 PAX4O43316 350 aa13.1□□□□□ -0.31
SCARF1-202ENST00000348987 INSP01308 110 aa13.1□□□□□ -0.31
SCARF1-202ENST00000348987 FAM19A1Q7Z5A9 133 aa13.1□□□□□ -0.31
SCARF1-202ENST00000348987 ORMDL1Q9P0S3 153 aa13.1□□□□□ -0.31
SCARF1-202ENST00000348987 UNC79Q9P2D8 2635 aa13.09□□□□□ -0.31
SCARF1-202ENST00000348987 UBE2L6O14933 153 aa13.09□□□□□ -0.31
SCARF1-202ENST00000348987 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
SCARF1-202ENST00000348987 K7EQD1 137 aa13.08□□□□□ -0.32
SCARF1-202ENST00000348987 ENHOQ6UWT2 76 aa13.08□□□□□ -0.32
SCARF1-202ENST00000348987 C20orf197Q8N268 126 aa13.08□□□□□ -0.32
SCARF1-202ENST00000348987 ESM1Q9NQ30 184 aa13.07□□□□□ -0.32
SCARF1-202ENST00000348987 TMEM243Q9BU79 118 aa13.06□□□□□ -0.32
SCARF1-202ENST00000348987 NDUFC2O95298 119 aa13.05□□□□□ -0.32
SCARF1-202ENST00000348987 Q6ZTI0 123 aa13.05□□□□□ -0.32
SCARF1-202ENST00000348987 STHQ8IWL8 128 aa13.05□□□□□ -0.32
SCARF1-202ENST00000348987 DNAJC9-AS1A6NH13 148 aa13.04□□□□□ -0.32
SCARF1-202ENST00000348987 ANK3Q12955 4377 aaKnown RBP13.04□□□□□ -0.32
SCARF1-202ENST00000348987 TRBV10-1A0A0K0K1A3 114 aa13.03□□□□□ -0.32
SCARF1-202ENST00000348987 S100A7L2Q5SY68 101 aa13.03□□□□□ -0.32
SCARF1-202ENST00000348987 TRBV6-4A0A1B0GX49 114 aa13.02□□□□□ -0.32
SCARF1-202ENST00000348987 IBA57-AS1B1ANH7 110 aa13.02□□□□□ -0.32
SCARF1-202ENST00000348987 FN1P02751 2386 aaKnown RBP13.02□□□□□ -0.32
SCARF1-202ENST00000348987 GCN1Q92616 2671 aaKnown RBP13.02□□□□□ -0.33
SCARF1-202ENST00000348987 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.33
SCARF1-202ENST00000348987 NDUFC2-KCTD14E9PQ53 114 aa13.02□□□□□ -0.33
SCARF1-202ENST00000348987 WFDC10AQ9H1F0 79 aa13.02□□□□□ -0.33
SCARF1-202ENST00000348987 C11orf68Q9H3H3 251 aaKnown RBP13.02□□□□□ -0.33
SCARF1-202ENST00000348987 XCL1P47992 114 aa13.01□□□□□ -0.33
SCARF1-202ENST00000348987 CCL24O00175 119 aa13□□□□□ -0.33
SCARF1-202ENST00000348987 FAM236DA0A1B0GTK5 79 aa13□□□□□ -0.33
SCARF1-202ENST00000348987 JMJD7-PLA2G4BH0Y9G9 81 aa13□□□□□ -0.33
SCARF1-202ENST00000348987 FAM236CP0DP71 79 aa13□□□□□ -0.33
SCARF1-202ENST00000348987 ATP5EP2Q5VTU8 51 aa13□□□□□ -0.33
SCARF1-202ENST00000348987 LOC100131303A0A0U1RQF7 123 aa12.99□□□□□ -0.33
SCARF1-202ENST00000348987 IL17DQ8TAD2 202 aa12.99□□□□□ -0.33
SCARF1-202ENST00000348987 IGLV4-60A0A075B6I1 120 aa12.99□□□□□ -0.33
SCARF1-202ENST00000348987 IGHV3OR16-9A0A0B4J2B5 98 aa12.99□□□□□ -0.33
SCARF1-202ENST00000348987 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
SCARF1-202ENST00000348987 LY6G6DO95868 133 aa12.98□□□□□ -0.33
SCARF1-202ENST00000348987 PLA2G2AP14555 144 aa12.98□□□□□ -0.33
SCARF1-202ENST00000348987 LYPD5Q6UWN5 251 aa12.98□□□□□ -0.33
SCARF1-202ENST00000348987 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
SCARF1-202ENST00000348987 PRR3P79522 188 aaKnown RBP12.97□□□□□ -0.33
SCARF1-202ENST00000348987 Q8N814 137 aa12.97□□□□□ -0.33
SCARF1-202ENST00000348987 GIG44P09565 113 aaPredicted RBP12.97□□□□□ -0.33
SCARF1-202ENST00000348987 SMR3AQ99954 134 aa12.97□□□□□ -0.33
SCARF1-202ENST00000348987 UBL5Q9BZL1 73 aa12.96□□□□□ -0.33
SCARF1-202ENST00000348987 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
SCARF1-202ENST00000348987 KMT2BQ9UMN6 2715 aaPredicted RBP12.95□□□□□ -0.34
SCARF1-202ENST00000348987 H7BZZ5 65 aa12.95□□□□□ -0.34
SCARF1-202ENST00000348987 TMEM256-PLSCR3K7ERE1 68 aa12.95□□□□□ -0.34
SCARF1-202ENST00000348987 KRTAP1-1Q07627 177 aa12.95□□□□□ -0.34
SCARF1-202ENST00000348987 VWFP04275 2813 aa12.94□□□□□ -0.34
SCARF1-202ENST00000348987 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
SCARF1-202ENST00000348987 HIVEP2P31629 2446 aa12.94□□□□□ -0.34
SCARF1-202ENST00000348987 A0A087WZ39 114 aa12.94□□□□□ -0.34
SCARF1-202ENST00000348987 MRAPQ8TCY5 172 aa12.94□□□□□ -0.34
SCARF1-202ENST00000348987 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
SCARF1-202ENST00000348987 LINC00336Q6ZUF6 198 aa12.93□□□□□ -0.34
SCARF1-202ENST00000348987 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
SCARF1-202ENST00000348987 TRBV10-3A0A0K0K1G6 114 aa12.92□□□□□ -0.34
SCARF1-202ENST00000348987 TMEM86BQ8N661 226 aa12.92□□□□□ -0.34
SCARF1-202ENST00000348987 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
SCARF1-202ENST00000348987 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
SCARF1-202ENST00000348987 SERP1Q9Y6X1 66 aa12.91□□□□□ -0.34
SCARF1-202ENST00000348987 EPM2AB3EWF7 344 aa12.91□□□□□ -0.34
SCARF1-202ENST00000348987 LINC01006Q8NI28 216 aa12.9□□□□□ -0.34
SCARF1-202ENST00000348987 SNURFQ9Y675 71 aa12.9□□□□□ -0.35
SCARF1-202ENST00000348987 J3QKU1 62 aa12.89□□□□□ -0.35
SCARF1-202ENST00000348987 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
SCARF1-202ENST00000348987 TRAV7A0A075B6U4 112 aa12.88□□□□□ -0.35
SCARF1-202ENST00000348987 TRAV10A0A0B4J240 114 aa12.87□□□□□ -0.35
SCARF1-202ENST00000348987 M0R2N4 97 aa12.87□□□□□ -0.35
SCARF1-202ENST00000348987 TRBV6-8A0A0A6YYG3 113 aa12.86□□□□□ -0.35
SCARF1-202ENST00000348987 RMI2Q96E14 147 aa12.86□□□□□ -0.35
SCARF1-202ENST00000348987 C19orf73Q9NVV2 129 aa12.86□□□□□ -0.35
SCARF1-202ENST00000348987 PRO0628Q9UI54 55 aa12.86□□□□□ -0.35
SCARF1-202ENST00000348987 LINC00959A0A1B0GUT2 108 aa12.85□□□□□ -0.35
SCARF1-202ENST00000348987 HAMPP81172 84 aa12.85□□□□□ -0.35
SCARF1-202ENST00000348987 LINC01547P58512 204 aaPredicted RBP12.84□□□□□ -0.35
SCARF1-202ENST00000348987 KLKP1Q107X0 134 aa12.84□□□□□ -0.35
SCARF1-202ENST00000348987 Q6ZQT0 140 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms