RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 NCR2O95944 276 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 RPS10P46783 165 aaKnown RBP3.49□□□□□ -1.85
VCAM1-202ENST00000347652 RHOHQ15669 191 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 ORMDL2Q53FV1 153 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 ORMDL3Q8N138 153 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 RPL39LQ96EH5 51 aaKnown RBP3.49□□□□□ -1.85
VCAM1-202ENST00000347652 KLK5Q9Y337 293 aaPredicted RBP3.49□□□□□ -1.85
VCAM1-202ENST00000347652 A0A0J9YY99 117 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 TRBV6-5A0A0K0K1A5 114 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 IMUPQ9GZP8 106 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
VCAM1-202ENST00000347652 PPP1R17O96001 155 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 TOMM6Q96B49 74 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 PRELID3AQ96N28 172 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 A0A087X002 238 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 KRTAP4-16G5E9R7 235 aaPredicted RBP3.48□□□□□ -1.85
VCAM1-202ENST00000347652 NPYP01303 97 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 UBE2D3P61077 147 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 UBE2D2P62837 147 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 RPL36AP83881 106 aaKnown RBP3.48□□□□□ -1.85
VCAM1-202ENST00000347652 SLC25A34Q6PIV7 304 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 RPL36ALQ969Q0 106 aaKnown RBP3.48□□□□□ -1.85
VCAM1-202ENST00000347652 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 A0A096LPF7 62 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 TRAV13-1A0A0B4J241 112 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 NUPR2A6NF83 97 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 UBE2L6O14933 153 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
VCAM1-202ENST00000347652 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 ST20Q9HBF5 79 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 ICOSQ9Y6W8 199 aa3.48□□□□□ -1.85
VCAM1-202ENST00000347652 MT-ATP8P03928 68 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 NMUP48645 174 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 C15orf53Q8NAA6 179 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 Q8NBF4 154 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 ALMS1Q8TCU4 4167 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 SDHAF1A6NFY7 115 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 ZC2HC1BQ5TFG8 222 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 LAMTOR3Q9UHA4 124 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 APLNQ9ULZ1 77 aa3.47□□□□□ -1.85
VCAM1-202ENST00000347652 IGLV2-18A0A075B6J9 118 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 I3L3M4 83 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 PRR4Q16378 134 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 C10orf126Q8N4M7 172 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 ATP6V0E2Q8NHE4 81 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 LINC01546A6NGU7 62 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 Q0VG73 95 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 IQCJQ1A5X6 159 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 LINC01554Q52M75 96 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 LYPD5Q6UWN5 251 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 Q8N8P6 123 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 CHAC1Q9BUX1 264 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 SMIM2Q9BVW6 85 aa3.46□□□□□ -1.86
VCAM1-202ENST00000347652 IGHV1-58A0A0C4DH39 117 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 LCE6AA0A183 80 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BKO60814 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BJP06899 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 IFITM1P13164 125 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 LGALS3P17931 250 aaKnown RBP3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BOP23527 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BBP33778 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BDP58876 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BCP62807 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 SS18Q15532 418 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST2H2BEQ16778 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-202ENST00000347652 SPATA12Q7Z6I5 190 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BHQ93079 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 FAM104AQ969W3 186 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BNQ99877 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 HIST1H2BMQ99879 126 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 MIEN1Q9BRT3 115 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 C8orf17Q9NRJ1 99 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 LY6G6CO95867 125 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 ESRGQ1W209 222 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 MPLKIPQ8TAP9 179 aa3.45□□□□□ -1.86
VCAM1-202ENST00000347652 NXT2Q9NPJ8 142 aaKnown RBP3.45□□□□□ -1.86
VCAM1-202ENST00000347652 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 C20orf203Q8NBC4 194 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 DEFB104AQ8WTQ1 72 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 K7EMI3 77 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 LELP1Q5T871 98 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 C9orf153Q5TBE3 101 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 SCXQ7RTU7 201 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 CHCHD7Q9BUK0 85 aa3.44□□□□□ -1.86
VCAM1-202ENST00000347652 EPPK1P58107 5090 aaKnown RBP3.44□□□□□ -1.86
VCAM1-202ENST00000347652 IGHV1-24A0A0C4DH33 117 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 FCER1GP30273 86 aa3.43□□□□□ -1.86
VCAM1-202ENST00000347652 COA6Q5JTJ3 125 aaKnown RBP3.43□□□□□ -1.86
VCAM1-202ENST00000347652 Q6ZUT4 128 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms