RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 KRTAP10-1P60331 282 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 COA6Q5JTJ3 125 aaKnown RBP7.68□□□□□ -1.18
SNCA-202ENST00000345009 CARD19Q96LW7 228 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 CHAC1Q9BUX1 264 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 MAP1LC3CQ9BXW4 147 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 NDUFA1O15239 70 aa7.67□□□□□ -1.18
SNCA-202ENST00000345009 CDK2AP2O75956 126 aa7.67□□□□□ -1.18
SNCA-202ENST00000345009 CKS1BP61024 79 aa7.67□□□□□ -1.18
SNCA-202ENST00000345009 F8VRH5 84 aa7.66□□□□□ -1.18
SNCA-202ENST00000345009 SLPIP03973 132 aa7.66□□□□□ -1.18
SNCA-202ENST00000345009 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
SNCA-202ENST00000345009 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
SNCA-202ENST00000345009 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
SNCA-202ENST00000345009 H0Y8G0 127 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 TMEM170BQ5T4T1 132 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 Q8IZM0 81 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 DPH3Q96FX2 82 aa7.65□□□□□ -1.18
SNCA-202ENST00000345009 MRPL35Q9NZE8 188 aaKnown RBP7.65□□□□□ -1.18
SNCA-202ENST00000345009 PLNP26678 52 aa7.64□□□□□ -1.19
SNCA-202ENST00000345009 CXCL5P42830 114 aa7.64□□□□□ -1.19
SNCA-202ENST00000345009 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
SNCA-202ENST00000345009 C11orf86A6NJI1 115 aa7.63□□□□□ -1.19
SNCA-202ENST00000345009 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
SNCA-202ENST00000345009 PLA2G1BP04054 148 aaKnown RBP7.63□□□□□ -1.19
SNCA-202ENST00000345009 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
SNCA-202ENST00000345009 Q6ZRU5 148 aa7.63□□□□□ -1.19
SNCA-202ENST00000345009 COX7B2Q8TF08 81 aa7.63□□□□□ -1.19
SNCA-202ENST00000345009 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
SNCA-202ENST00000345009 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
SNCA-202ENST00000345009 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
SNCA-202ENST00000345009 S100A2P29034 98 aa7.62□□□□□ -1.19
SNCA-202ENST00000345009 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
SNCA-202ENST00000345009 ODF1Q14990 250 aa7.62□□□□□ -1.19
SNCA-202ENST00000345009 SFTA2Q6UW10 78 aa7.62□□□□□ -1.19
SNCA-202ENST00000345009 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
SNCA-202ENST00000345009 DPM2O94777 84 aa7.61□□□□□ -1.19
SNCA-202ENST00000345009 S100A12P80511 92 aa7.61□□□□□ -1.19
SNCA-202ENST00000345009 LCE4AQ5TA78 99 aa7.61□□□□□ -1.19
SNCA-202ENST00000345009 UNQ6190/PRO20217Q6UXQ8 127 aa7.61□□□□□ -1.19
SNCA-202ENST00000345009 Q6ZSA8 131 aa7.61□□□□□ -1.19
SNCA-202ENST00000345009 DNAH5Q8TE73 4624 aa7.6□□□□□ -1.19
SNCA-202ENST00000345009 SYS1-DBNDD2H3BUS1 97 aa7.6□□□□□ -1.19
SNCA-202ENST00000345009 PET117Q6UWS5 81 aa7.6□□□□□ -1.19
SNCA-202ENST00000345009 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
SNCA-202ENST00000345009 CBY1Q9Y3M2 126 aa7.6□□□□□ -1.19
SNCA-202ENST00000345009 LRP1BQ9NZR2 4599 aa7.6□□□□□ -1.19
SNCA-202ENST00000345009 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
SNCA-202ENST00000345009 C20orf202A1L168 122 aa7.59□□□□□ -1.19
SNCA-202ENST00000345009 IGKCP01834 107 aa7.59□□□□□ -1.19
SNCA-202ENST00000345009 AKR1D1P51857 326 aa7.59□□□□□ -1.19
SNCA-202ENST00000345009 HERVK_113P61574 105 aa7.59□□□□□ -1.19
SNCA-202ENST00000345009 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
SNCA-202ENST00000345009 IGKV2-24A0A0C4DH68 120 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 TMEM223A0PJW6 202 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 XGP55808 180 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
SNCA-202ENST00000345009 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 MAJINQ3KP22 176 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 C10orf25Q5T742 122 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 C6orf48Q9UBA6 75 aa7.58□□□□□ -1.2
SNCA-202ENST00000345009 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
SNCA-202ENST00000345009 TLX1NBP0CAT3 122 aa7.57□□□□□ -1.2
SNCA-202ENST00000345009 PTTG1IPP53801 180 aa7.57□□□□□ -1.2
SNCA-202ENST00000345009 KRTDAPP60985 99 aa7.57□□□□□ -1.2
SNCA-202ENST00000345009 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
SNCA-202ENST00000345009 A0A096LNI7 61 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 C3orf79P0CE67 100 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 LINC01545Q5VT33 79 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 SCXQ7RTU7 201 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 SPACA4Q8TDM5 124 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 PMCHL2Q9BQD1 86 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 KRTAP4-11Q9BYQ6 195 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
SNCA-202ENST00000345009 CHTF8P0CG12 524 aa7.55□□□□□ -1.2
SNCA-202ENST00000345009 HIST3H2BBQ8N257 126 aa7.55□□□□□ -1.2
SNCA-202ENST00000345009 CIRBP-AS1Q8TBR5 109 aa7.55□□□□□ -1.2
SNCA-202ENST00000345009 PLEKHB2Q96CS7 222 aa7.55□□□□□ -1.2
SNCA-202ENST00000345009 A0A087WYN8 130 aa7.54□□□□□ -1.2
SNCA-202ENST00000345009 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
SNCA-202ENST00000345009 SNRPEP62304 92 aaKnown RBP7.54□□□□□ -1.2
SNCA-202ENST00000345009 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
SNCA-202ENST00000345009 STPG4Q8N801 248 aa7.54□□□□□ -1.2
SNCA-202ENST00000345009 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
SNCA-202ENST00000345009 MYMXA0A1B0GTQ4 84 aa7.53□□□□□ -1.2
SNCA-202ENST00000345009 COX17Q14061 63 aa7.53□□□□□ -1.2
SNCA-202ENST00000345009 C9orf116Q5BN46 136 aaPredicted RBP7.53□□□□□ -1.2
SNCA-202ENST00000345009 HIST1H2BLQ99880 126 aa7.53□□□□□ -1.2
SNCA-202ENST00000345009 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
SNCA-202ENST00000345009 LEPROTO15243 131 aa7.52□□□□□ -1.21
SNCA-202ENST00000345009 HERV-K104P63124 156 aa7.52□□□□□ -1.21
SNCA-202ENST00000345009 HAMPP81172 84 aa7.52□□□□□ -1.21
SNCA-202ENST00000345009 Q6ZRP5 223 aa7.52□□□□□ -1.21
SNCA-202ENST00000345009 RYR1P21817 5038 aa7.52□□□□□ -1.21
SNCA-202ENST00000345009 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
SNCA-202ENST00000345009 PANO1I0J062 215 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms