RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 HSPB8Q9UJY1 196 aa7.73□□□□□ -1.17
PDCD1-202ENST00000343705 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
PDCD1-202ENST00000343705 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
PDCD1-202ENST00000343705 FABP4P15090 132 aa7.72□□□□□ -1.17
PDCD1-202ENST00000343705 LINC01561Q8N1V8 128 aa7.72□□□□□ -1.17
PDCD1-202ENST00000343705 ORAOV1Q8WV07 137 aa7.72□□□□□ -1.17
PDCD1-202ENST00000343705 HIST1H2BLQ99880 126 aa7.72□□□□□ -1.17
PDCD1-202ENST00000343705 OPRPNQ99935 248 aaPredicted RBP7.72□□□□□ -1.17
PDCD1-202ENST00000343705 MRPL35Q9NZE8 188 aaKnown RBP7.72□□□□□ -1.17
PDCD1-202ENST00000343705 A0A087WZ39 114 aa7.71□□□□□ -1.18
PDCD1-202ENST00000343705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
PDCD1-202ENST00000343705 NDUFA1O15239 70 aa7.71□□□□□ -1.18
PDCD1-202ENST00000343705 HNRNPA3P51991 378 aaKnown RBP7.71□□□□□ -1.18
PDCD1-202ENST00000343705 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
PDCD1-202ENST00000343705 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
PDCD1-202ENST00000343705 SEC11AP67812 179 aa7.7□□□□□ -1.18
PDCD1-202ENST00000343705 LINC00242Q5T6M2 205 aa7.7□□□□□ -1.18
PDCD1-202ENST00000343705 VCX2Q9H322 139 aa7.7□□□□□ -1.18
PDCD1-202ENST00000343705 HERC1Q15751 4861 aa7.7□□□□□ -1.18
PDCD1-202ENST00000343705 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
PDCD1-202ENST00000343705 Q6ZRP5 223 aa7.69□□□□□ -1.18
PDCD1-202ENST00000343705 LINC00173Q6ZV60 143 aa7.69□□□□□ -1.18
PDCD1-202ENST00000343705 MAP1LC3CQ9BXW4 147 aa7.69□□□□□ -1.18
PDCD1-202ENST00000343705 TLX1NBP0CAT3 122 aa7.68□□□□□ -1.18
PDCD1-202ENST00000343705 UBE2D1P51668 147 aa7.68□□□□□ -1.18
PDCD1-202ENST00000343705 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
PDCD1-202ENST00000343705 AMELXQ99217 191 aa7.68□□□□□ -1.18
PDCD1-202ENST00000343705 PMVKQ15126 192 aa7.67□□□□□ -1.18
PDCD1-202ENST00000343705 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
PDCD1-202ENST00000343705 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
PDCD1-202ENST00000343705 TRAV12-1A0A0B4J245 112 aa7.66□□□□□ -1.18
PDCD1-202ENST00000343705 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
PDCD1-202ENST00000343705 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
PDCD1-202ENST00000343705 KRTDAPP60985 99 aa7.66□□□□□ -1.18
PDCD1-202ENST00000343705 PET117Q6UWS5 81 aa7.66□□□□□ -1.18
PDCD1-202ENST00000343705 SYS1-DBNDD2H3BUS1 97 aa7.65□□□□□ -1.18
PDCD1-202ENST00000343705 PRSS2P07478 247 aa7.65□□□□□ -1.18
PDCD1-202ENST00000343705 HERVK_113P63121 156 aa7.65□□□□□ -1.18
PDCD1-202ENST00000343705 C9orf116Q5BN46 136 aaPredicted RBP7.65□□□□□ -1.18
PDCD1-202ENST00000343705 CST9LQ9H4G1 147 aa7.65□□□□□ -1.18
PDCD1-202ENST00000343705 A0A1W2PNN7 141 aa7.64□□□□□ -1.19
PDCD1-202ENST00000343705 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
PDCD1-202ENST00000343705 REG3GQ6UW15 175 aa7.64□□□□□ -1.19
PDCD1-202ENST00000343705 UNQ6190/PRO20217Q6UXQ8 127 aa7.64□□□□□ -1.19
PDCD1-202ENST00000343705 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
PDCD1-202ENST00000343705 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
PDCD1-202ENST00000343705 C20orf202A1L168 122 aa7.63□□□□□ -1.19
PDCD1-202ENST00000343705 H0Y8G0 127 aa7.63□□□□□ -1.19
PDCD1-202ENST00000343705 ZC2HC1BQ5TFG8 222 aa7.63□□□□□ -1.19
PDCD1-202ENST00000343705 GEMIN7Q9H840 131 aaKnown RBP7.63□□□□□ -1.19
PDCD1-202ENST00000343705 C6orf48Q9UBA6 75 aa7.63□□□□□ -1.19
PDCD1-202ENST00000343705 CHTOPQ9Y3Y2 248 aaKnown RBP7.63□□□□□ -1.19
PDCD1-202ENST00000343705 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 AKR1D1P51857 326 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 CKS1BP61024 79 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 ODF1Q14990 250 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 LINC01545Q5VT33 79 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 Q8IZM0 81 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 LINC01600Q96MT4 127 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
PDCD1-202ENST00000343705 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
PDCD1-202ENST00000343705 LOC105371267A0A1B0GV96 52 aa7.61□□□□□ -1.19
PDCD1-202ENST00000343705 F8VRH5 84 aa7.61□□□□□ -1.19
PDCD1-202ENST00000343705 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
PDCD1-202ENST00000343705 SRSF9Q13242 221 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDCD1-202ENST00000343705 CXCL5P42830 114 aa7.6□□□□□ -1.19
PDCD1-202ENST00000343705 GAGE2EQ4V326 116 aa7.6□□□□□ -1.19
PDCD1-202ENST00000343705 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
PDCD1-202ENST00000343705 PLA2G2DQ9UNK4 145 aa7.6□□□□□ -1.19
PDCD1-202ENST00000343705 TINCRA0A1B0GVN0 87 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 DPM2O94777 84 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 SCGB1D1O95968 90 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 IGLC3P0DOY3 106 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
PDCD1-202ENST00000343705 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 TOMM7Q9P0U1 55 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 CDKN2A-AS1Q9UH64 79 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 PSORS1C2Q9UIG4 136 aa7.59□□□□□ -1.19
PDCD1-202ENST00000343705 IGKCP01834 107 aa7.58□□□□□ -1.2
PDCD1-202ENST00000343705 PLNP26678 52 aa7.58□□□□□ -1.2
PDCD1-202ENST00000343705 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
PDCD1-202ENST00000343705 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
PDCD1-202ENST00000343705 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
PDCD1-202ENST00000343705 IGLV5-45A0A087WSX0 123 aa7.56□□□□□ -1.2
PDCD1-202ENST00000343705 C11orf86A6NJI1 115 aa7.56□□□□□ -1.2
PDCD1-202ENST00000343705 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
PDCD1-202ENST00000343705 LINC00469Q8N7U9 141 aa7.56□□□□□ -1.2
PDCD1-202ENST00000343705 H3BRM9 83 aa7.55□□□□□ -1.2
PDCD1-202ENST00000343705 M0QXV9 152 aa7.55□□□□□ -1.2
PDCD1-202ENST00000343705 PYY3Q5JQD4 70 aa7.55□□□□□ -1.2
PDCD1-202ENST00000343705 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
PDCD1-202ENST00000343705 IGLV7-43P04211 117 aa7.54□□□□□ -1.2
PDCD1-202ENST00000343705 ZNF22P17026 224 aaPredicted RBP7.54□□□□□ -1.2
PDCD1-202ENST00000343705 UBE2BP63146 152 aa7.54□□□□□ -1.2
PDCD1-202ENST00000343705 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
PDCD1-202ENST00000343705 DIRC1Q969H9 104 aa7.54□□□□□ -1.2
PDCD1-202ENST00000343705 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
PDCD1-202ENST00000343705 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms