RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 A0A096LPF7 62 aa10.38□□□□□ -0.75
CLCN1-201ENST00000343257 IBA57-AS1B1ANH7 110 aa10.38□□□□□ -0.75
CLCN1-201ENST00000343257 M0R2N4 97 aa10.38□□□□□ -0.75
CLCN1-201ENST00000343257 RPL35AP18077 110 aaKnown RBP10.38□□□□□ -0.75
CLCN1-201ENST00000343257 NBEAL2Q6ZNJ1 2754 aa10.37□□□□□ -0.75
CLCN1-201ENST00000343257 FAM236DA0A1B0GTK5 79 aa10.37□□□□□ -0.75
CLCN1-201ENST00000343257 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
CLCN1-201ENST00000343257 NF1P21359 2839 aa10.37□□□□□ -0.75
CLCN1-201ENST00000343257 UBL5Q9BZL1 73 aa10.37□□□□□ -0.75
CLCN1-201ENST00000343257 Q8N814 137 aa10.36□□□□□ -0.75
CLCN1-201ENST00000343257 C9orf116Q5BN46 136 aaPredicted RBP10.36□□□□□ -0.75
CLCN1-201ENST00000343257 ZFYVE26Q68DK2 2539 aa10.36□□□□□ -0.75
CLCN1-201ENST00000343257 FAM208BQ5VWN6 2430 aa10.36□□□□□ -0.75
CLCN1-201ENST00000343257 A0A096LNT2 108 aa10.36□□□□□ -0.75
CLCN1-201ENST00000343257 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
CLCN1-201ENST00000343257 TMEM86BQ8N661 226 aa10.35□□□□□ -0.75
CLCN1-201ENST00000343257 RMI2Q96E14 147 aa10.35□□□□□ -0.75
CLCN1-201ENST00000343257 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
CLCN1-201ENST00000343257 TEX15Q9BXT5 2789 aa10.35□□□□□ -0.75
CLCN1-201ENST00000343257 S100A7L2Q5SY68 101 aa10.34□□□□□ -0.75
CLCN1-201ENST00000343257 LAMTOR3Q9UHA4 124 aa10.34□□□□□ -0.75
CLCN1-201ENST00000343257 TRAV10A0A0B4J240 114 aa10.34□□□□□ -0.75
CLCN1-201ENST00000343257 WIPF1O43516 503 aa10.34□□□□□ -0.75
CLCN1-201ENST00000343257 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
CLCN1-201ENST00000343257 C6orf99Q4VX62 202 aa10.34□□□□□ -0.75
CLCN1-201ENST00000343257 ANKRD17O75179 2603 aaKnown RBP10.34□□□□□ -0.75
CLCN1-201ENST00000343257 A0A087WZ39 114 aa10.33□□□□□ -0.76
CLCN1-201ENST00000343257 ACACBO00763 2458 aa10.33□□□□□ -0.76
CLCN1-201ENST00000343257 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
CLCN1-201ENST00000343257 NDUFC2O95298 119 aa10.33□□□□□ -0.76
CLCN1-201ENST00000343257 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
CLCN1-201ENST00000343257 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 LINC00336Q6ZUF6 198 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 SPATA3Q8NHX4 192 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 TMEM256-PLSCR3K7ERE1 68 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 DEFB130BP0DP73 79 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 DEFB130AP0DP74 79 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 WFDC11Q8NEX6 87 aa10.32□□□□□ -0.76
CLCN1-201ENST00000343257 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
CLCN1-201ENST00000343257 ABCA12Q86UK0 2595 aa10.3□□□□□ -0.76
CLCN1-201ENST00000343257 MYO18BQ8IUG5 2567 aa10.3□□□□□ -0.76
CLCN1-201ENST00000343257 CFAP46Q8IYW2 2715 aa10.29□□□□□ -0.76
CLCN1-201ENST00000343257 H7BZZ5 65 aa10.29□□□□□ -0.76
CLCN1-201ENST00000343257 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
CLCN1-201ENST00000343257 LY6G6DO95868 133 aa10.29□□□□□ -0.76
CLCN1-201ENST00000343257 LINC01356Q8N9X3 169 aa10.29□□□□□ -0.76
CLCN1-201ENST00000343257 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
CLCN1-201ENST00000343257 CACNA1AO00555 2505 aa10.28□□□□□ -0.76
CLCN1-201ENST00000343257 F8WEM9 126 aa10.28□□□□□ -0.76
CLCN1-201ENST00000343257 Q8NDZ9 215 aa10.28□□□□□ -0.76
CLCN1-201ENST00000343257 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
CLCN1-201ENST00000343257 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
CLCN1-201ENST00000343257 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
CLCN1-201ENST00000343257 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
CLCN1-201ENST00000343257 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
CLCN1-201ENST00000343257 LINC01547P58512 204 aaPredicted RBP10.26□□□□□ -0.77
CLCN1-201ENST00000343257 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
CLCN1-201ENST00000343257 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
CLCN1-201ENST00000343257 Q6YL49 198 aa10.26□□□□□ -0.77
CLCN1-201ENST00000343257 Q8N3U1 123 aa10.26□□□□□ -0.77
CLCN1-201ENST00000343257 APCP25054 2843 aa10.25□□□□□ -0.77
CLCN1-201ENST00000343257 GCN1Q92616 2671 aaKnown RBP10.25□□□□□ -0.77
CLCN1-201ENST00000343257 PLAC8L1A1L4L8 177 aa10.25□□□□□ -0.77
CLCN1-201ENST00000343257 C4orf3Q8WVX3 66 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 GIG44P09565 113 aaPredicted RBP10.24□□□□□ -0.77
CLCN1-201ENST00000343257 Q6ZVQ6 151 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 TRAV7A0A075B6U4 112 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 Q6ZQT0 140 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 ESM1Q9NQ30 184 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
CLCN1-201ENST00000343257 LINC00167Q96N53 147 aa10.23□□□□□ -0.77
CLCN1-201ENST00000343257 GYPEP15421 78 aa10.23□□□□□ -0.77
CLCN1-201ENST00000343257 TM2D3Q9BRN9 247 aa10.23□□□□□ -0.77
CLCN1-201ENST00000343257 Q6ZQY7 126 aa10.22□□□□□ -0.77
CLCN1-201ENST00000343257 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
CLCN1-201ENST00000343257 C16orf74Q96GX8 76 aa10.21□□□□□ -0.78
CLCN1-201ENST00000343257 DOPEY1Q5JWR5 2465 aa10.21□□□□□ -0.78
CLCN1-201ENST00000343257 LINC00575Q6W349 94 aa10.2□□□□□ -0.78
CLCN1-201ENST00000343257 FP248Q71RG6 208 aaPredicted RBP10.2□□□□□ -0.78
CLCN1-201ENST00000343257 C6orf223Q8N319 242 aa10.2□□□□□ -0.78
CLCN1-201ENST00000343257 Q8IZM0 81 aa10.2□□□□□ -0.78
CLCN1-201ENST00000343257 Q8N9L7 120 aa10.19□□□□□ -0.78
CLCN1-201ENST00000343257 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
CLCN1-201ENST00000343257 CR1P17927 2039 aa10.19□□□□□ -0.78
CLCN1-201ENST00000343257 J3QLI3 93 aa10.18□□□□□ -0.78
CLCN1-201ENST00000343257 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
CLCN1-201ENST00000343257 CCL24O00175 119 aa10.18□□□□□ -0.78
CLCN1-201ENST00000343257 C10orf25Q5T742 122 aa10.18□□□□□ -0.78
CLCN1-201ENST00000343257 PKD1L2Q7Z442 2459 aa10.17□□□□□ -0.78
CLCN1-201ENST00000343257 LINC00482Q8N8I6 264 aa10.17□□□□□ -0.78
CLCN1-201ENST00000343257 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
CLCN1-201ENST00000343257 BRK1Q8WUW1 75 aa10.17□□□□□ -0.78
CLCN1-201ENST00000343257 PRO0628Q9UI54 55 aa10.17□□□□□ -0.78
CLCN1-201ENST00000343257 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
CLCN1-201ENST00000343257 ANGP03950 147 aaKnown RBP10.16□□□□□ -0.78
CLCN1-201ENST00000343257 UNQ6190/PRO20217Q6UXQ8 127 aa10.16□□□□□ -0.78
CLCN1-201ENST00000343257 TRBV7-6A0A0J9YX20 115 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms