RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
PBX1-201ENST00000340699 NDUFA6P56556 154 aa14.09□□□□□ -0.15
PBX1-201ENST00000340699 C9orf116Q5BN46 136 aaPredicted RBP14.09□□□□□ -0.15
PBX1-201ENST00000340699 A0A096LNJ9 63 aa14.08□□□□□ -0.16
PBX1-201ENST00000340699 PMCHL1Q16048 86 aa14.08□□□□□ -0.16
PBX1-201ENST00000340699 Q6ZRP5 223 aa14.08□□□□□ -0.16
PBX1-201ENST00000340699 GAGE2EQ4V326 116 aa14.07□□□□□ -0.16
PBX1-201ENST00000340699 GAGE2DQ9UEU5 116 aa14.07□□□□□ -0.16
PBX1-201ENST00000340699 MYCBP2O75592 4640 aa14.07□□□□□ -0.16
PBX1-201ENST00000340699 OXTP01178 125 aa14.06□□□□□ -0.16
PBX1-201ENST00000340699 IGLV5-45A0A087WSX0 123 aa14.05□□□□□ -0.16
PBX1-201ENST00000340699 ATP5LO75964 103 aa14.05□□□□□ -0.16
PBX1-201ENST00000340699 PRR3P79522 188 aaKnown RBP14.05□□□□□ -0.16
PBX1-201ENST00000340699 PDZD11Q5EBL8 140 aa14.05□□□□□ -0.16
PBX1-201ENST00000340699 SMIM1B2RUZ4 78 aa14.04□□□□□ -0.16
PBX1-201ENST00000340699 NDUFC2-KCTD14E9PQ53 114 aa14.04□□□□□ -0.16
PBX1-201ENST00000340699 H3BRM9 83 aa14.04□□□□□ -0.16
PBX1-201ENST00000340699 DMBT1Q9UGM3 2413 aaPredicted RBP14.03□□□□□ -0.16
PBX1-201ENST00000340699 CXCL5P42830 114 aa14.03□□□□□ -0.16
PBX1-201ENST00000340699 CHCHD1Q96BP2 118 aaKnown RBP14.03□□□□□ -0.16
PBX1-201ENST00000340699 F8VRH5 84 aa14.02□□□□□ -0.17
PBX1-201ENST00000340699 COX7B2Q8TF08 81 aa14.02□□□□□ -0.17
PBX1-201ENST00000340699 SPINK8P0C7L1 97 aa14.01□□□□□ -0.17
PBX1-201ENST00000340699 IGLC3P0DOY3 106 aa14.01□□□□□ -0.17
PBX1-201ENST00000340699 TRGC2P03986 189 aa13.99□□□□□ -0.17
PBX1-201ENST00000340699 PHF5AQ7RTV0 110 aaKnown RBP13.99□□□□□ -0.17
PBX1-201ENST00000340699 BAGE3Q86Y29 109 aa13.99□□□□□ -0.17
PBX1-201ENST00000340699 FAM168BA1KXE4 195 aa13.98□□□□□ -0.17
PBX1-201ENST00000340699 FAM19A5Q7Z5A7 132 aaPredicted RBP13.98□□□□□ -0.17
PBX1-201ENST00000340699 PKHD1L1Q86WI1 4243 aa13.96□□□□□ -0.17
PBX1-201ENST00000340699 HSBP1O75506 76 aa13.96□□□□□ -0.17
PBX1-201ENST00000340699 ZNF22P17026 224 aaPredicted RBP13.94□□□□□ -0.18
PBX1-201ENST00000340699 C9orf129Q5T035 196 aaKnown RBP13.94□□□□□ -0.18
PBX1-201ENST00000340699 IFI27L1Q96BM0 104 aa13.93□□□□□ -0.18
PBX1-201ENST00000340699 PSORS1C2Q9UIG4 136 aa13.93□□□□□ -0.18
PBX1-201ENST00000340699 CHTOPQ9Y3Y2 248 aaKnown RBP13.93□□□□□ -0.18
PBX1-201ENST00000340699 SPINK6Q6UWN8 80 aa13.92□□□□□ -0.18
PBX1-201ENST00000340699 COLCA2A8K830 154 aa13.91□□□□□ -0.18
PBX1-201ENST00000340699 M0QXV9 152 aa13.91□□□□□ -0.18
PBX1-201ENST00000340699 TMEM170BQ5T4T1 132 aa13.91□□□□□ -0.18
PBX1-201ENST00000340699 IGLV5-39A0A0G2JS06 123 aa13.9□□□□□ -0.18
PBX1-201ENST00000340699 C11orf86A6NJI1 115 aa13.9□□□□□ -0.18
PBX1-201ENST00000340699 C1orf137Q5JT78 98 aa13.9□□□□□ -0.18
PBX1-201ENST00000340699 FAM19A2Q8N3H0 131 aa13.9□□□□□ -0.18
PBX1-201ENST00000340699 XAGE1AQ9HD64 81 aa13.9□□□□□ -0.18
PBX1-201ENST00000340699 TRAV12-1A0A0B4J245 112 aa13.89□□□□□ -0.19
PBX1-201ENST00000340699 UBE2BP63146 152 aa13.89□□□□□ -0.19
PBX1-201ENST00000340699 LRP1Q07954 4544 aaKnown RBP13.89□□□□□ -0.19
PBX1-201ENST00000340699 HERC1Q15751 4861 aa13.89□□□□□ -0.19
PBX1-201ENST00000340699 KRTAP7-1Q8IUC3 87 aa13.88□□□□□ -0.19
PBX1-201ENST00000340699 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
PBX1-201ENST00000340699 FAT3Q8TDW7 4589 aa13.86□□□□□ -0.19
PBX1-201ENST00000340699 SERF1AO75920 110 aa13.86□□□□□ -0.19
PBX1-201ENST00000340699 REG3GQ6UW15 175 aa13.86□□□□□ -0.19
PBX1-201ENST00000340699 LEPROTL1O95214 131 aa13.84□□□□□ -0.19
PBX1-201ENST00000340699 SERTAD4-AS1Q5TG53 156 aa13.84□□□□□ -0.19
PBX1-201ENST00000340699 C22orf24Q9Y442 160 aa13.84□□□□□ -0.19
PBX1-201ENST00000340699 LBHQ53QV2 105 aaPredicted RBP13.83□□□□□ -0.2
PBX1-201ENST00000340699 SFTA2Q6UW10 78 aa13.82□□□□□ -0.2
PBX1-201ENST00000340699 H0Y8G0 127 aa13.81□□□□□ -0.2
PBX1-201ENST00000340699 IGLV7-43P04211 117 aa13.81□□□□□ -0.2
PBX1-201ENST00000340699 PFN2P35080 140 aa13.81□□□□□ -0.2
PBX1-201ENST00000340699 KRTAP11-1Q8IUC1 163 aa13.81□□□□□ -0.2
PBX1-201ENST00000340699 TMEM223A0PJW6 202 aa13.8□□□□□ -0.2
PBX1-201ENST00000340699 SCO1O75880 301 aa13.8□□□□□ -0.2
PBX1-201ENST00000340699 LINC00310P59036 64 aa13.8□□□□□ -0.2
PBX1-201ENST00000340699 LINC01600Q96MT4 127 aa13.79□□□□□ -0.2
PBX1-201ENST00000340699 TP73-AS1Q9UF72 201 aa13.79□□□□□ -0.2
PBX1-201ENST00000340699 HSPB8Q9UJY1 196 aa13.79□□□□□ -0.2
PBX1-201ENST00000340699 ERG28Q9UKR5 140 aa13.79□□□□□ -0.2
PBX1-201ENST00000340699 MT1HL1P0DM35 61 aa13.78□□□□□ -0.2
PBX1-201ENST00000340699 COX17Q14061 63 aa13.78□□□□□ -0.2
PBX1-201ENST00000340699 ODF1Q14990 250 aa13.78□□□□□ -0.2
PBX1-201ENST00000340699 ZNF625Q96I27 306 aaPredicted RBP13.78□□□□□ -0.2
PBX1-201ENST00000340699 PLA2G2DQ9UNK4 145 aa13.78□□□□□ -0.2
PBX1-201ENST00000340699 NUPR1O60356 82 aa13.77□□□□□ -0.21
PBX1-201ENST00000340699 FABP4P15090 132 aa13.77□□□□□ -0.21
PBX1-201ENST00000340699 MRPL55Q7Z7F7 128 aaKnown RBP13.77□□□□□ -0.21
PBX1-201ENST00000340699 DIRC1Q969H9 104 aa13.76□□□□□ -0.21
PBX1-201ENST00000340699 NKAPP1Q8N9T2 125 aa13.74□□□□□ -0.21
PBX1-201ENST00000340699 IGLV5-37A0A075B6J1 123 aa13.71□□□□□ -0.21
PBX1-201ENST00000340699 PLNP26678 52 aa13.71□□□□□ -0.21
PBX1-201ENST00000340699 LINC00167Q96N53 147 aa13.71□□□□□ -0.21
PBX1-201ENST00000340699 SND1-IT1Q9HBX3 110 aa13.71□□□□□ -0.21
PBX1-201ENST00000340699 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 LINC00158P58513 81 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST2H2BEQ16778 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BHQ93079 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BNQ99877 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 HIST1H2BMQ99879 126 aa13.7□□□□□ -0.22
PBX1-201ENST00000340699 MAP1LC3CQ9BXW4 147 aa13.69□□□□□ -0.22
PBX1-201ENST00000340699 GAGE10A6NGK3 116 aa13.68□□□□□ -0.22
PBX1-201ENST00000340699 RPL37AP8A6NKH3 93 aa13.68□□□□□ -0.22
PBX1-201ENST00000340699 H0Y9J4 135 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 418.3 ms