RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
LIN54-201ENST00000340417 J3QL48 77 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 PPDPFLQ8WWR9 84 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 BAHCC1Q9P281 2608 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 TRBV10-2A0A0K0K1G8 114 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 FAM19A4Q96LR4 140 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 ITPR3Q14573 2671 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 FXYD2P54710 66 aa8.91□□□□□ -0.98
LIN54-201ENST00000340417 KLK9Q2XQG4 91 aa8.9□□□□□ -0.98
LIN54-201ENST00000340417 BRCA2P51587 3418 aa8.9□□□□□ -0.98
LIN54-201ENST00000340417 Q6ZRU5 148 aa8.9□□□□□ -0.98
LIN54-201ENST00000340417 FLNAP21333 2647 aaKnown RBP8.9□□□□□ -0.98
LIN54-201ENST00000340417 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
LIN54-201ENST00000340417 LINC01620Q4KN68 170 aa8.9□□□□□ -0.98
LIN54-201ENST00000340417 ZNF73O43830 326 aaPredicted RBP8.9□□□□□ -0.99
LIN54-201ENST00000340417 TCL1BO95988 128 aa8.89□□□□□ -0.99
LIN54-201ENST00000340417 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
LIN54-201ENST00000340417 F8W1H4 67 aa8.89□□□□□ -0.99
LIN54-201ENST00000340417 MRPL55Q7Z7F7 128 aaKnown RBP8.89□□□□□ -0.99
LIN54-201ENST00000340417 DLEU1O43261 78 aa8.89□□□□□ -0.99
LIN54-201ENST00000340417 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
LIN54-201ENST00000340417 K7EP34 96 aa8.88□□□□□ -0.99
LIN54-201ENST00000340417 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
LIN54-201ENST00000340417 TIMM17BO60830 172 aa8.88□□□□□ -0.99
LIN54-201ENST00000340417 PDE6GP18545 87 aa8.87□□□□□ -0.99
LIN54-201ENST00000340417 UBE2V1Q13404 147 aa8.87□□□□□ -0.99
LIN54-201ENST00000340417 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
LIN54-201ENST00000340417 MGAM2Q2M2H8 2515 aa8.86□□□□□ -0.99
LIN54-201ENST00000340417 A0A0B4J2C4 111 aa8.86□□□□□ -0.99
LIN54-201ENST00000340417 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
LIN54-201ENST00000340417 SLPIP03973 132 aa8.86□□□□□ -0.99
LIN54-201ENST00000340417 PRUNE2Q8WUY3 3088 aa8.84□□□□□ -0.99
LIN54-201ENST00000340417 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
LIN54-201ENST00000340417 Q6ZQY7 126 aa8.83□□□□□ -1
LIN54-201ENST00000340417 LINC00336Q6ZUF6 198 aa8.83□□□□□ -1
LIN54-201ENST00000340417 TRBV10-3A0A0K0K1G6 114 aa8.83□□□□□ -1
LIN54-201ENST00000340417 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
LIN54-201ENST00000340417 AMELXQ99217 191 aa8.82□□□□□ -1
LIN54-201ENST00000340417 KIF25-AS1Q9Y6Z4 181 aa8.82□□□□□ -1
LIN54-201ENST00000340417 A0A1B0GX51 115 aa8.82□□□□□ -1
LIN54-201ENST00000340417 MAPKAPK5-AS1Q8N8E1 139 aa8.82□□□□□ -1
LIN54-201ENST00000340417 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
LIN54-201ENST00000340417 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
LIN54-201ENST00000340417 DNAH10OSP0CZ25 163 aa8.81□□□□□ -1
LIN54-201ENST00000340417 C22orf24Q9Y442 160 aa8.8□□□□□ -1
LIN54-201ENST00000340417 UPK3BQ9BT76 320 aa8.8□□□□□ -1
LIN54-201ENST00000340417 IGKV4-1P06312 121 aa8.79□□□□□ -1
LIN54-201ENST00000340417 BPY2O14599 106 aa8.79□□□□□ -1
LIN54-201ENST00000340417 Q8N3U1 123 aa8.79□□□□□ -1
LIN54-201ENST00000340417 C14orf132Q9NPU4 83 aa8.79□□□□□ -1
LIN54-201ENST00000340417 PRYO14603 147 aa8.79□□□□□ -1
LIN54-201ENST00000340417 MP68P56378 58 aa8.79□□□□□ -1
LIN54-201ENST00000340417 LINC00337Q8N6G1 96 aa8.79□□□□□ -1
LIN54-201ENST00000340417 SMIM11BQ8TCY0 68 aa8.79□□□□□ -1
LIN54-201ENST00000340417 CCKP06307 115 aa8.78□□□□□ -1
LIN54-201ENST00000340417 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
LIN54-201ENST00000340417 PRR3P79522 188 aaKnown RBP8.78□□□□□ -1
LIN54-201ENST00000340417 A0A0C4DFX4 3053 aa8.78□□□□□ -1
LIN54-201ENST00000340417 ACYP1P07311 99 aa8.78□□□□□ -1
LIN54-201ENST00000340417 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1
LIN54-201ENST00000340417 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
LIN54-201ENST00000340417 PRLHP81277 87 aa8.77□□□□□ -1.01
LIN54-201ENST00000340417 Q6ZRP5 223 aa8.77□□□□□ -1.01
LIN54-201ENST00000340417 H3BT86 120 aa8.77□□□□□ -1.01
LIN54-201ENST00000340417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.76□□□□□ -1.01
LIN54-201ENST00000340417 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
LIN54-201ENST00000340417 MAST4O15021 2626 aa8.75□□□□□ -1.01
LIN54-201ENST00000340417 CASC10Q5T4H9 136 aa8.74□□□□□ -1.01
LIN54-201ENST00000340417 Q9BRP9 147 aa8.74□□□□□ -1.01
LIN54-201ENST00000340417 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
LIN54-201ENST00000340417 ATRQ13535 2644 aa8.74□□□□□ -1.01
LIN54-201ENST00000340417 ENHOQ6UWT2 76 aa8.74□□□□□ -1.01
LIN54-201ENST00000340417 CR1P17927 2039 aa8.74□□□□□ -1.01
LIN54-201ENST00000340417 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
LIN54-201ENST00000340417 TEX49A0A1B0GTD5 131 aa8.73□□□□□ -1.01
LIN54-201ENST00000340417 LST1O00453 97 aa8.72□□□□□ -1.01
LIN54-201ENST00000340417 TRIAP1O43715 76 aa8.72□□□□□ -1.01
LIN54-201ENST00000340417 Q9UF83 564 aa8.72□□□□□ -1.01
LIN54-201ENST00000340417 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
LIN54-201ENST00000340417 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
LIN54-201ENST00000340417 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.01
LIN54-201ENST00000340417 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
LIN54-201ENST00000340417 IGHV3OR16-9A0A0B4J2B5 98 aa8.7□□□□□ -1.02
LIN54-201ENST00000340417 SMCR5Q8TEV8 140 aa8.7□□□□□ -1.02
LIN54-201ENST00000340417 AKAP13Q12802 2813 aa8.7□□□□□ -1.02
LIN54-201ENST00000340417 CENPEQ02224 2701 aa8.7□□□□□ -1.02
LIN54-201ENST00000340417 TEP1Q99973 2627 aaKnown RBP8.7□□□□□ -1.02
LIN54-201ENST00000340417 A8MTW9 85 aa8.7□□□□□ -1.02
LIN54-201ENST00000340417 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
LIN54-201ENST00000340417 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
LIN54-201ENST00000340417 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
LIN54-201ENST00000340417 MGAQ8IWI9 3026 aa8.69□□□□□ -1.02
LIN54-201ENST00000340417 A0A087WTM6 91 aa8.69□□□□□ -1.02
LIN54-201ENST00000340417 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
LIN54-201ENST00000340417 Q6JHZ5 121 aa8.68□□□□□ -1.02
LIN54-201ENST00000340417 NDUFC2O95298 119 aa8.68□□□□□ -1.02
LIN54-201ENST00000340417 SMR3BP02814 79 aaPredicted RBP8.68□□□□□ -1.02
LIN54-201ENST00000340417 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
LIN54-201ENST00000340417 YPEL4Q96NS1 127 aa8.68□□□□□ -1.02
LIN54-201ENST00000340417 IGSF10Q6WRI0 2623 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms