RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 A0A0J9YXV3 536 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 K7EQG2 157 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 C11orf53Q8IXP5 236 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 REG3AQ06141 175 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF581Q9P0T4 197 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 CDSNQ15517 529 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 POM121L12Q8N7R1 296 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 A0A0U1RRA0 63 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 A6NDX4 124 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 LINC00208Q96KT6 92 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 POLR2KP53803 58 aaKnown RBP2.42□□□□□ -2.02
CSMD3-202ENST00000339701 SCXQ7RTU7 201 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF702PQ9H963 129 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 CR1P17927 2039 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 LMO4P61968 165 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 ASB16-AS1Q495Z4 193 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 CEP350Q5VT06 3117 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 CYYR1Q96J86 154 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 KRTAP24-1Q3LI83 254 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 ATP11AUNQ6ZP68 121 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 DCANP1Q8TF63 244 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 CTSZQ9UBR2 303 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV2-11P01706 119 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 CD164Q04900 197 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 FHL3Q13643 280 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 WFDC2Q14508 124 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 Q8N9W7 124 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 DEFB105AQ8NG35 78 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 SETXQ7Z333 2677 aaKnown RBP2.41□□□□□ -2.02
CSMD3-202ENST00000339701 M0QY20 66 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 RSPO1Q2MKA7 263 aaPredicted RBP2.41□□□□□ -2.02
CSMD3-202ENST00000339701 C6orf99Q4VX62 202 aa2.41□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV4-3A0A075B6K6 122 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 KLKP1Q107X0 134 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF295-AS1Q8N0V1 137 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 CDKN2A-AS1Q9UH64 79 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 SDIM1Q6ZPB5 146 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 MAP6D1Q9H9H5 199 aa2.4□□□□□ -2.02
CSMD3-202ENST00000339701 LINC01546A6NGU7 62 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 NUPR1O60356 82 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 CDIP1Q9H305 208 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 PRRC2CQ9Y520 2896 aaKnown RBP2.4□□□□□ -2.03
CSMD3-202ENST00000339701 RBX1P62877 108 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 C10orf55Q5SWW7 151 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 LOC110117498A0A087WWA1 95 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 IGHV4-28A0A0C4DH34 117 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 KRTAP10-9P60411 292 aa2.4□□□□□ -2.03
CSMD3-202ENST00000339701 TRIAP1O43715 76 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 WISP2O76076 250 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 NOTCH1P46531 2555 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 A8MUN3 132 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 PRR4Q16378 134 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 BEAN1Q3B7T3 259 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 AKAP13Q12802 2813 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 UQCR11O14957 56 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 GPHA2Q96T91 129 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 Q8N3U1 123 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 TRAV22A0A0B4J277 110 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 Q8N814 137 aa2.39□□□□□ -2.03
CSMD3-202ENST00000339701 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
CSMD3-202ENST00000339701 C1orf137Q5JT78 98 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 ENHOQ6UWT2 76 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 IGKV3D-7A0A0C4DH55 119 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 ZNF503-AS2A6NEH8 195 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 SMKR1H3BMG3 65 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 LINC00846Q9NV44 126 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 Q6ZVQ6 151 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 PRR15Q8IV56 129 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 Q6ZQY7 126 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 LY6LH3BQJ8 138 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 SPAG11AQ6PDA7 123 aa2.38□□□□□ -2.03
CSMD3-202ENST00000339701 SERTAD4-AS1Q5TG53 156 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 CIRBP-AS1Q8TBR5 109 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 M0R2T5 61 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 K7ERJ3 54 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 Q6ZTC4 211 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 IGLV5-45A0A087WSX0 123 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 C7orf65Q6ZTY9 151 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 C11orf72Q8NBR9 251 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 GVQW2A0A096LPI5 108 aaPredicted RBP2.37□□□□□ -2.03
CSMD3-202ENST00000339701 TFF1P04155 84 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 FAM19A5Q7Z5A7 132 aaPredicted RBP2.37□□□□□ -2.03
CSMD3-202ENST00000339701 Q8N6K4 173 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 DEFB104AQ8WTQ1 72 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 ITPR3Q14573 2671 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 IGKV1D-37A0A075B6S9 117 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 WIPF1O43516 503 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
CSMD3-202ENST00000339701 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 IGIPA6NJ69 53 aa2.37□□□□□ -2.03
CSMD3-202ENST00000339701 CDC42SE2Q9NRR3 84 aa2.36□□□□□ -2.03
CSMD3-202ENST00000339701 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.36□□□□□ -2.03
CSMD3-202ENST00000339701 A0A1B0GU69 56 aa2.36□□□□□ -2.03
CSMD3-202ENST00000339701 IGKV2-29A2NJV5 120 aaPredicted RBP2.36□□□□□ -2.03
CSMD3-202ENST00000339701 MAPKAPK5-AS1Q8N8E1 139 aa2.36□□□□□ -2.03
CSMD3-202ENST00000339701 MLANAQ16655 118 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms