RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
NIPAL3-202ENST00000339255 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
NIPAL3-202ENST00000339255 KMT2AQ03164 3969 aa9.55□□□□□ -0.88
NIPAL3-202ENST00000339255 DNAH6Q9C0G6 4158 aa9.54□□□□□ -0.88
NIPAL3-202ENST00000339255 LINC00587B1AMM8 73 aa9.54□□□□□ -0.88
NIPAL3-202ENST00000339255 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
NIPAL3-202ENST00000339255 MIEN1Q9BRT3 115 aa9.54□□□□□ -0.88
NIPAL3-202ENST00000339255 PRO1933Q9H354 126 aa9.54□□□□□ -0.88
NIPAL3-202ENST00000339255 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
NIPAL3-202ENST00000339255 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
NIPAL3-202ENST00000339255 WFDC2Q14508 124 aa9.53□□□□□ -0.88
NIPAL3-202ENST00000339255 LINC00526Q96FQ7 95 aa9.53□□□□□ -0.88
NIPAL3-202ENST00000339255 A0A087WTM6 91 aa9.52□□□□□ -0.89
NIPAL3-202ENST00000339255 A0A0J9YXY3 114 aa9.52□□□□□ -0.89
NIPAL3-202ENST00000339255 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.89
NIPAL3-202ENST00000339255 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 EREGO14944 169 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 TIMM17BO60830 172 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 HIGD1BQ9P298 99 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 COX17Q14061 63 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 RNF151Q2KHN1 245 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 CARD19Q96LW7 228 aa9.51□□□□□ -0.89
NIPAL3-202ENST00000339255 TMEM238C9JI98 176 aa9.5□□□□□ -0.89
NIPAL3-202ENST00000339255 RTL8CO15255 209 aa9.5□□□□□ -0.89
NIPAL3-202ENST00000339255 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
NIPAL3-202ENST00000339255 Q8N814 137 aa9.5□□□□□ -0.89
NIPAL3-202ENST00000339255 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
NIPAL3-202ENST00000339255 Q6ZRU5 148 aa9.49□□□□□ -0.89
NIPAL3-202ENST00000339255 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
NIPAL3-202ENST00000339255 C10orf25Q5T742 122 aa9.48□□□□□ -0.89
NIPAL3-202ENST00000339255 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
NIPAL3-202ENST00000339255 HNRNPA3P51991 378 aaKnown RBP9.48□□□□□ -0.89
NIPAL3-202ENST00000339255 C2orf91Q6ZV80 131 aa9.48□□□□□ -0.89
NIPAL3-202ENST00000339255 SLPIP03973 132 aa9.47□□□□□ -0.89
NIPAL3-202ENST00000339255 Q6ZVH6 145 aa9.47□□□□□ -0.89
NIPAL3-202ENST00000339255 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
NIPAL3-202ENST00000339255 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
NIPAL3-202ENST00000339255 GCSHP23434 173 aa9.46□□□□□ -0.89
NIPAL3-202ENST00000339255 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.89
NIPAL3-202ENST00000339255 LITAFQ99732 161 aa9.46□□□□□ -0.89
NIPAL3-202ENST00000339255 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 SMIM13P0DJ93 91 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 DDTP30046 118 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 LINC00158P58513 81 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 TNP2Q05952 138 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 NDUFC2-KCTD14E9PQ53 114 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 PFN2P35080 140 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 C9orf116Q5BN46 136 aaPredicted RBP9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
NIPAL3-202ENST00000339255 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
NIPAL3-202ENST00000339255 TAL2Q16559 108 aa9.44□□□□□ -0.9
NIPAL3-202ENST00000339255 HIST1H4GQ99525 98 aa9.44□□□□□ -0.9
NIPAL3-202ENST00000339255 ADAMTSL4-AS1Q5T5F5 129 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 A0A0U1RRA0 63 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 LOC107984640A0A0U1RRK4 108 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 IFITM1P13164 125 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 PTTG1IPP53801 180 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 HSD52Q0P140 79 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
NIPAL3-202ENST00000339255 DAND5Q8N907 189 aa9.4□□□□□ -0.9
NIPAL3-202ENST00000339255 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 DNAH10Q8IVF4 4471 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 IGLV5-52A0A0A0MRZ9 124 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 LOC107984156A0A0G2JMH3 177 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 CTAG1AP78358 180 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 RPL18AQ02543 176 aaKnown RBP9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 ARL17AQ8IVW1 177 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 LINC00308Q8TCZ7 52 aa9.39□□□□□ -0.91
NIPAL3-202ENST00000339255 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
NIPAL3-202ENST00000339255 M0R143 59 aa9.38□□□□□ -0.91
NIPAL3-202ENST00000339255 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
NIPAL3-202ENST00000339255 Q6ZRP5 223 aa9.38□□□□□ -0.91
NIPAL3-202ENST00000339255 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
NIPAL3-202ENST00000339255 CEND1Q8N111 149 aa9.37□□□□□ -0.91
NIPAL3-202ENST00000339255 SACSQ9NZJ4 4579 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 A6NJY4 79 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 C16orf90A8MZG2 172 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 HYDINQ4G0P3 5121 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
NIPAL3-202ENST00000339255 SDIM1Q6ZPB5 146 aa9.35□□□□□ -0.91
NIPAL3-202ENST00000339255 DNAH2Q9P225 4427 aa9.34□□□□□ -0.91
NIPAL3-202ENST00000339255 NPC2P61916 151 aa9.34□□□□□ -0.91
NIPAL3-202ENST00000339255 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
NIPAL3-202ENST00000339255 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
NIPAL3-202ENST00000339255 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-202ENST00000339255 FRAS1Q86XX4 4008 aa9.33□□□□□ -0.92
NIPAL3-202ENST00000339255 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
NIPAL3-202ENST00000339255 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
NIPAL3-202ENST00000339255 A0A096LNI7 61 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms