RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 SYCNQ0VAF6 134 aa9.81□□□□□ -0.84
CMC1-201ENST00000334841 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
CMC1-201ENST00000334841 PYY3Q5JQD4 70 aa9.81□□□□□ -0.84
CMC1-201ENST00000334841 CARD19Q96LW7 228 aa9.81□□□□□ -0.84
CMC1-201ENST00000334841 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
CMC1-201ENST00000334841 IGKV2D-26A0A0A0MRZ7 120 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 F8WDY8 70 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 NDUFA1O15239 70 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 CXCL5P42830 114 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 CKS1BP61024 79 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
CMC1-201ENST00000334841 LOC105371267A0A1B0GV96 52 aa9.79□□□□□ -0.84
CMC1-201ENST00000334841 J3QQQ9 107 aa9.79□□□□□ -0.84
CMC1-201ENST00000334841 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
CMC1-201ENST00000334841 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
CMC1-201ENST00000334841 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
CMC1-201ENST00000334841 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
CMC1-201ENST00000334841 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
CMC1-201ENST00000334841 CDPF1Q6NVV7 123 aa9.78□□□□□ -0.84
CMC1-201ENST00000334841 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
CMC1-201ENST00000334841 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
CMC1-201ENST00000334841 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
CMC1-201ENST00000334841 LGALS3P17931 250 aaKnown RBP9.76□□□□□ -0.85
CMC1-201ENST00000334841 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
CMC1-201ENST00000334841 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
CMC1-201ENST00000334841 NMUP48645 174 aa9.75□□□□□ -0.85
CMC1-201ENST00000334841 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
CMC1-201ENST00000334841 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
CMC1-201ENST00000334841 DNAH5Q8TE73 4624 aa9.75□□□□□ -0.85
CMC1-201ENST00000334841 RNF151Q2KHN1 245 aa9.74□□□□□ -0.85
CMC1-201ENST00000334841 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
CMC1-201ENST00000334841 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
CMC1-201ENST00000334841 GCSHP23434 173 aa9.72□□□□□ -0.85
CMC1-201ENST00000334841 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
CMC1-201ENST00000334841 VAMP8Q9BV40 100 aa9.72□□□□□ -0.85
CMC1-201ENST00000334841 PAM16Q9Y3D7 125 aa9.72□□□□□ -0.85
CMC1-201ENST00000334841 C16orf90A8MZG2 172 aa9.71□□□□□ -0.86
CMC1-201ENST00000334841 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
CMC1-201ENST00000334841 HERV-K104P63124 156 aa9.71□□□□□ -0.86
CMC1-201ENST00000334841 SDIM1Q6ZPB5 146 aa9.71□□□□□ -0.86
CMC1-201ENST00000334841 ERG28Q9UKR5 140 aa9.71□□□□□ -0.86
CMC1-201ENST00000334841 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
CMC1-201ENST00000334841 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
CMC1-201ENST00000334841 ZNF815PA8K554 130 aa9.7□□□□□ -0.86
CMC1-201ENST00000334841 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
CMC1-201ENST00000334841 SPATA45Q537H7 98 aa9.7□□□□□ -0.86
CMC1-201ENST00000334841 A0A096LNI7 61 aa9.69□□□□□ -0.86
CMC1-201ENST00000334841 NDUFC2-KCTD14E9PQ53 114 aa9.69□□□□□ -0.86
CMC1-201ENST00000334841 SMIM6P0DI80 62 aa9.69□□□□□ -0.86
CMC1-201ENST00000334841 RPL18AQ02543 176 aaKnown RBP9.69□□□□□ -0.86
CMC1-201ENST00000334841 Q6ZRP5 223 aa9.69□□□□□ -0.86
CMC1-201ENST00000334841 TP73-AS1Q9UF72 201 aa9.69□□□□□ -0.86
CMC1-201ENST00000334841 A0A0J9YXY3 114 aa9.68□□□□□ -0.86
CMC1-201ENST00000334841 PFN2P35080 140 aa9.68□□□□□ -0.86
CMC1-201ENST00000334841 PANO1I0J062 215 aa9.67□□□□□ -0.86
CMC1-201ENST00000334841 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
CMC1-201ENST00000334841 MEIG1Q5JSS6 88 aa9.67□□□□□ -0.86
CMC1-201ENST00000334841 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
CMC1-201ENST00000334841 DYNC1H1Q14204 4646 aaKnown RBP9.67□□□□□ -0.86
CMC1-201ENST00000334841 IGKV2-24A0A0C4DH68 120 aa9.66□□□□□ -0.86
CMC1-201ENST00000334841 A0A0U1RRA0 63 aa9.66□□□□□ -0.86
CMC1-201ENST00000334841 SMIM13P0DJ93 91 aa9.66□□□□□ -0.86
CMC1-201ENST00000334841 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
CMC1-201ENST00000334841 GAGE2BQ13066 116 aa9.66□□□□□ -0.86
CMC1-201ENST00000334841 COX17Q14061 63 aa9.66□□□□□ -0.86
CMC1-201ENST00000334841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.66□□□□□ -0.86
CMC1-201ENST00000334841 EPPK1P58107 5090 aaKnown RBP9.65□□□□□ -0.86
CMC1-201ENST00000334841 COX8AP10176 69 aa9.65□□□□□ -0.86
CMC1-201ENST00000334841 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
CMC1-201ENST00000334841 Q6ZSA8 131 aa9.65□□□□□ -0.86
CMC1-201ENST00000334841 FAM30AQ9NZY2 134 aa9.65□□□□□ -0.86
CMC1-201ENST00000334841 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
CMC1-201ENST00000334841 LINC00158P58513 81 aa9.64□□□□□ -0.87
CMC1-201ENST00000334841 BOD1L2Q8IYS8 172 aa9.64□□□□□ -0.87
CMC1-201ENST00000334841 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
CMC1-201ENST00000334841 C14orf144Q96I85 54 aa9.64□□□□□ -0.87
CMC1-201ENST00000334841 LITAFQ99732 161 aa9.64□□□□□ -0.87
CMC1-201ENST00000334841 CIRBPQ14011 172 aaKnown RBP9.63□□□□□ -0.87
CMC1-201ENST00000334841 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
CMC1-201ENST00000334841 SCGB1D4Q6XE38 83 aa9.63□□□□□ -0.87
CMC1-201ENST00000334841 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
CMC1-201ENST00000334841 LRP1BQ9NZR2 4599 aa9.63□□□□□ -0.87
CMC1-201ENST00000334841 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
CMC1-201ENST00000334841 S100A12P80511 92 aa9.62□□□□□ -0.87
CMC1-201ENST00000334841 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
CMC1-201ENST00000334841 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
CMC1-201ENST00000334841 DAND5Q8N907 189 aa9.62□□□□□ -0.87
CMC1-201ENST00000334841 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
CMC1-201ENST00000334841 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
CMC1-201ENST00000334841 DLEU1O43261 78 aa9.61□□□□□ -0.87
CMC1-201ENST00000334841 TIMM17BO60830 172 aa9.61□□□□□ -0.87
CMC1-201ENST00000334841 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
CMC1-201ENST00000334841 HAMPP81172 84 aa9.59□□□□□ -0.87
CMC1-201ENST00000334841 SLC25A34Q6PIV7 304 aa9.59□□□□□ -0.87
CMC1-201ENST00000334841 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
CMC1-201ENST00000334841 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
CMC1-201ENST00000334841 C12orf57Q99622 126 aa9.58□□□□□ -0.88
CMC1-201ENST00000334841 A0A087WYN8 130 aa9.57□□□□□ -0.88
CMC1-201ENST00000334841 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms